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The map label for this gene is ykuI [H]

Identifier: 116327523

GI number: 116327523

Start: 851095

End: 852339

Strand: Reverse

Name: ykuI [H]

Synonym: LBL_0751

Alternate gene names: 116327523

Gene position: 852339-851095 (Counterclockwise)

Preceding gene: 116327525

Following gene: 116327521

Centisome position: 23.58

GC content: 41.12

Gene sequence:

>1245_bases
ATGTTATACAGCCAGGATAAAAGCAATTTACTTTCCTACGGCGAGAACTACTATCAGCCTCATTATCAACCCATTCTAGA
AGTTACCAATTGTAATATCATAGGATACGAGGTTCTAGGAAGATTTTATTTTCCCGAAAAAAACGAATATCGTTCTCTGG
GTTATCAGTTCCACAACCCGGAATTAGACACGATTCGTCTCATTCAAATCGATCGGCTGATTCGGGAAAAAGCGATCCGT
CATCTCAAAGACTCGGGAATAAAAACCAAACTTTTTCTTAACATGATGCCTAACTTTCTCTCTATGATTCATACGGGAGA
CGTTCTAGATCTCAAAAGACTTCACGTTCTTAATCTTATGGAAAAATACGACATTTCACCTTCGGAGGTCGTTTTAGAAA
TCACGGAAGATAAGTTCGACGGAAACATCGAAAAACTTCTTTCAATCGTGAACGTATTCAAAGACTACGGATTCAAGATC
GCGGTCGACGACCTCGGTGTCGGATTTTCCAATTTGGAAAGAATCGGCTACATTCATCCGGACATAATAAAGGTCGATAT
CAAGATCATGCGGGAAAGTTTAAACCGAAGATCCTTCAAAAATGTACTGAGTGCAATCGCCGACATGTCCCAAAAACTAG
GCTTCGATCTTTTGTTCGAAGGAATCGAAACCGAAGAAGAATTACATCTCGCACTTTCCATGGGAGCAAATCTACTCCAA
GGATTTTATTTTTCAAGACCTCAAGTCGAATTTCAGGATAAAAAACAATTCAACAGAACTCTGAGAGACGCTTTGGAAAA
ATTCTCGGGGCTTCGATTTATGGAACTACTGGAGGAATTTCAAAAAGGCCAGGAAATCATCGACGCCTTAGGCGAGAAAT
TAGAAGCGATTCGTCACAACGGAAAGGATGATCTTCCTTTAGTCCTTCATCTCATGCTCTCCAACTTGCCGTCCGAAATT
CTTTCCGTCTTTGCCTGTGATATTTTCGGTTATCAGATCACTCCTACGTATTTCCGTTCTCATCCCGGAGAAGAATGGGA
TTCCGACCTGGCCGAAATCGGAAATAATTACGCATGGAGACCTTTTTTTATTCGTCATAAGGCAAAGGTAGTTCAAAGTT
CCGCCAAGTGGACCGTCACAGAGCCTGTTTATGATATGGACCTCCACAAACAGGTCGTAATCTTTACCTACACGCTCAGA
GATAATTACATTCTCGTTATCAAGATGGACTGGGAAAGGGTTTAA

Upstream 100 bases:

>100_bases
TGTAATCTTTTCTTCTACTTAATTTGATACTTTTTATCTAGAATTTTGCTTGTCGGAACCCATTTGACGGATTTCAATAA
ATAGATTTTTAAAGAAGATC

Downstream 100 bases:

>100_bases
TCTTTTTCGTCAACGACTCTCCCAATCGTAGTTTCCAAACGAGAAAAAAGACTTAGGGTTCTATGTTTTGAAGTTTGAGG
CGTTTTCGAATTTCCTTACC

Product: Signal transduction protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 414; Mature: 414

Protein sequence:

>414_residues
MLYSQDKSNLLSYGENYYQPHYQPILEVTNCNIIGYEVLGRFYFPEKNEYRSLGYQFHNPELDTIRLIQIDRLIREKAIR
HLKDSGIKTKLFLNMMPNFLSMIHTGDVLDLKRLHVLNLMEKYDISPSEVVLEITEDKFDGNIEKLLSIVNVFKDYGFKI
AVDDLGVGFSNLERIGYIHPDIIKVDIKIMRESLNRRSFKNVLSAIADMSQKLGFDLLFEGIETEEELHLALSMGANLLQ
GFYFSRPQVEFQDKKQFNRTLRDALEKFSGLRFMELLEEFQKGQEIIDALGEKLEAIRHNGKDDLPLVLHLMLSNLPSEI
LSVFACDIFGYQITPTYFRSHPGEEWDSDLAEIGNNYAWRPFFIRHKAKVVQSSAKWTVTEPVYDMDLHKQVVIFTYTLR
DNYILVIKMDWERV

Sequences:

>Translated_414_residues
MLYSQDKSNLLSYGENYYQPHYQPILEVTNCNIIGYEVLGRFYFPEKNEYRSLGYQFHNPELDTIRLIQIDRLIREKAIR
HLKDSGIKTKLFLNMMPNFLSMIHTGDVLDLKRLHVLNLMEKYDISPSEVVLEITEDKFDGNIEKLLSIVNVFKDYGFKI
AVDDLGVGFSNLERIGYIHPDIIKVDIKIMRESLNRRSFKNVLSAIADMSQKLGFDLLFEGIETEEELHLALSMGANLLQ
GFYFSRPQVEFQDKKQFNRTLRDALEKFSGLRFMELLEEFQKGQEIIDALGEKLEAIRHNGKDDLPLVLHLMLSNLPSEI
LSVFACDIFGYQITPTYFRSHPGEEWDSDLAEIGNNYAWRPFFIRHKAKVVQSSAKWTVTEPVYDMDLHKQVVIFTYTLR
DNYILVIKMDWERV
>Mature_414_residues
MLYSQDKSNLLSYGENYYQPHYQPILEVTNCNIIGYEVLGRFYFPEKNEYRSLGYQFHNPELDTIRLIQIDRLIREKAIR
HLKDSGIKTKLFLNMMPNFLSMIHTGDVLDLKRLHVLNLMEKYDISPSEVVLEITEDKFDGNIEKLLSIVNVFKDYGFKI
AVDDLGVGFSNLERIGYIHPDIIKVDIKIMRESLNRRSFKNVLSAIADMSQKLGFDLLFEGIETEEELHLALSMGANLLQ
GFYFSRPQVEFQDKKQFNRTLRDALEKFSGLRFMELLEEFQKGQEIIDALGEKLEAIRHNGKDDLPLVLHLMLSNLPSEI
LSVFACDIFGYQITPTYFRSHPGEEWDSDLAEIGNNYAWRPFFIRHKAKVVQSSAKWTVTEPVYDMDLHKQVVIFTYTLR
DNYILVIKMDWERV

Specific function: Unknown

COG id: COG2200

COG function: function code T; FOG: EAL domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 EAL domain [H]

Homologues:

Organism=Escherichia coli, GI226510982, Length=253, Percent_Identity=26.0869565217391, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI87082096, Length=133, Percent_Identity=31.5789473684211, Blast_Score=90, Evalue=3e-19,
Organism=Escherichia coli, GI1790496, Length=244, Percent_Identity=25.4098360655738, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI87081921, Length=226, Percent_Identity=24.3362831858407, Blast_Score=78, Evalue=9e-16,
Organism=Escherichia coli, GI87081743, Length=243, Percent_Identity=23.8683127572016, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1787541, Length=250, Percent_Identity=26.4, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI87081845, Length=229, Percent_Identity=26.2008733624454, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1788849, Length=135, Percent_Identity=24.4444444444444, Blast_Score=69, Evalue=8e-13,
Organism=Escherichia coli, GI1788502, Length=235, Percent_Identity=25.531914893617, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001633
- InterPro:   IPR018842 [H]

Pfam domain/function: PF00563 EAL; PF10388 YkuI_C [H]

EC number: NA

Molecular weight: Translated: 48424; Mature: 48424

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYSQDKSNLLSYGENYYQPHYQPILEVTNCNIIGYEVLGRFYFPEKNEYRSLGYQFHNP
CCCCCCCHHHHHCCHHHCCCCCHHHHEECCCCEEEHHHHHHHCCCCCCHHHHCCCEECCC
ELDTIRLIQIDRLIREKAIRHLKDSGIKTKLFLNMMPNFLSMIHTGDVLDLKRLHVLNLM
CCCEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
EKYDISPSEVVLEITEDKFDGNIEKLLSIVNVFKDYGFKIAVDDLGVGFSNLERIGYIHP
HHHCCCHHHEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCC
DIIKVDIKIMRESLNRRSFKNVLSAIADMSQKLGFDLLFEGIETEEELHLALSMGANLLQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHH
GFYFSRPQVEFQDKKQFNRTLRDALEKFSGLRFMELLEEFQKGQEIIDALGEKLEAIRHN
HHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GKDDLPLVLHLMLSNLPSEILSVFACDIFGYQITPTYFRSHPGEEWDSDLAEIGNNYAWR
CCCCHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHCCCCCCC
PFFIRHKAKVVQSSAKWTVTEPVYDMDLHKQVVIFTYTLRDNYILVIKMDWERV
CHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEEEEECCCEEEEEEECCCCC
>Mature Secondary Structure
MLYSQDKSNLLSYGENYYQPHYQPILEVTNCNIIGYEVLGRFYFPEKNEYRSLGYQFHNP
CCCCCCCHHHHHCCHHHCCCCCHHHHEECCCCEEEHHHHHHHCCCCCCHHHHCCCEECCC
ELDTIRLIQIDRLIREKAIRHLKDSGIKTKLFLNMMPNFLSMIHTGDVLDLKRLHVLNLM
CCCEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
EKYDISPSEVVLEITEDKFDGNIEKLLSIVNVFKDYGFKIAVDDLGVGFSNLERIGYIHP
HHHCCCHHHEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCC
DIIKVDIKIMRESLNRRSFKNVLSAIADMSQKLGFDLLFEGIETEEELHLALSMGANLLQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHH
GFYFSRPQVEFQDKKQFNRTLRDALEKFSGLRFMELLEEFQKGQEIIDALGEKLEAIRHN
HHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GKDDLPLVLHLMLSNLPSEILSVFACDIFGYQITPTYFRSHPGEEWDSDLAEIGNNYAWR
CCCCHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHCCCCCCC
PFFIRHKAKVVQSSAKWTVTEPVYDMDLHKQVVIFTYTLRDNYILVIKMDWERV
CHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEEEEECCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]