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The map label for this gene is ygcL [C]

Identifier: 116327447

GI number: 116327447

Start: 737446

End: 739047

Strand: Reverse

Name: ygcL [C]

Synonym: LBL_0663

Alternate gene names: 116327447

Gene position: 739047-737446 (Counterclockwise)

Preceding gene: 116327448

Following gene: 116327446

Centisome position: 20.45

GC content: 42.26

Gene sequence:

>1602_bases
ATGAATTTAATCAAGGACGTTTGGATTCCGGTCCAAAGGTTTTCCGAAAAATTAGAAGAGATCTCCCCATTTGAGATCAC
TTCCCGAATCGAGAATGACTCGGATCCGGTTATGTCTTTAAGCGCTCCTAGACCGGATTTTAACGGCGCTTTACTTCAAT
TTTTGGTCGGACTTTTACAGGCCGTTTTTTCCCCCGAAAACGAAACCGAATGGGAAGATCTTTTCGTAAATCCCCCCTCT
CCCGAGGTTTTAAAAGAAGCGATGGAGAAAGTAAAGTCCGCCTTTGAGCTATTTGGTGACGGCCCTAGATTTATGCAGGA
TACAAACCTGAACGAAGAGGATACGGTCTTTGATATCTCCGCGTTGTTTATCGAATCTCCAGGCGAAAATACGATCAAAC
TGAAAAAGGATTTTTTCATCAAAAGAAATTCCATTTCTCAGATCTGCGAAAAATGCGCGGGGATCGGTCTTTTTTCCTTT
CAGACCAATTCTCCTTCCGGAGGTCAAGGACACTTAACGTCCATTCGAGGCGGCGGACCTTTGACTACATTCGTAACTTC
TAAATTAAAAAACCCTAAAAAAAACTCTCTTTGGTCGAAACTCTGGCTCAACGTTCTTCCGAAATCCTACTTCCAAGTCA
ACGGCCAAAAAAAGATTCCGTTTCAATCCGTCTTTCCTTGGACCAACCCGAAAATTGAAGATCTTCAATCGAAAGGGAAA
ACGACCACTCCCCAAGATCTACATCCTTTGAGCGTCTATTGGTCCTATCCGAGAAGAATCCTCCTACGTAAAGATGTGGA
AAACGGTATTTGCGACGTCTGTAACCGTTCTTCCTCCGTTTTGGTCCGTTCCTATCATACAAAAACCTACGGTCTGAGTT
ATTCGGAAGGAGGTTGGATCCATCCTCTCAGCCCTTATTACAAATCTAAGGAGAGTTGGTTTCCGTATCATCCTCAACCG
GGAGGAATCCTCTATCACTACTGGCAGACGATCGCCTTGGGTAAGGAGCAAGAAGATCAAGCCGCCTTGGTCATTCGCCG
TTTTTTGAATCGGAAAATTCCGGGAGAACAGACTTCGATTTTAACCTTCGGTTACGATATGGACAATATGAAAGCCAGAT
GTTGGTACGAATCCGAGATTCCGTTTTTCAATATCCCTTCCGATAAAATCGAAAAATTCGAAGAACAAGTTTCACAAATT
CTAAATGCAAGTACGGAGGTCAAAAAAAATCTTCGTCAAGCGGTGCGTAACGCTTGGCTCGACAAGAAAAATGATTCCAA
AGGGGATTTGACGTTTTTGGACGTTTCCTTTTTGAAAGATACGGAAAATTCTTTCTACGATCTGATTCGAAACGTTCAAG
AAAATCTGATCTCAGATGTAGCGGACTTTGCCGCCCTGAAAGAAACTTGGCTCAAACTTTTAAACGAATCCGCTTGTAAA
CTTTTCGATCAGTATGCGGATTCCGGTTCTTTCGAATTCGAAAACATCGAAAGAATCGTAAAGGCGAGAAAAAATCTGAA
AATCTCCAATCTCGGTTCGAAAACTCGAATCATACTCGGACTAATCGTATCTGAAAAAACCTCTAAAAGGAACAAAAAAT
AA

Upstream 100 bases:

>100_bases
ATTCTTGGAGAGGCAAAGCCCTTAACAAAAAGAACGAAGTAGTTTCCTTTACCTACGACGAAAGATTCGGTTTTAGAAAA
GAGAAATAAAGAGGAACCTT

Downstream 100 bases:

>100_bases
AGACGATGAAATTTTACGAAAACAAAGAGAAATATAAGGAAACTATAATTAACTGGTGGATCGATCTAAAATCCAGAACG
GGAGACAGAGCCGCCCTGAG

Product: hypothetical protein

Products: NA

Alternate protein names: CRISPR-Associated Cse1 Family Protein; Cse1 Family CRISPR-Associated Protein; Cytoplasmic Protein; CRISPR-Associated Protein; Crispr-Associated Protein Cse1 Family

Number of amino acids: Translated: 533; Mature: 533

Protein sequence:

>533_residues
MNLIKDVWIPVQRFSEKLEEISPFEITSRIENDSDPVMSLSAPRPDFNGALLQFLVGLLQAVFSPENETEWEDLFVNPPS
PEVLKEAMEKVKSAFELFGDGPRFMQDTNLNEEDTVFDISALFIESPGENTIKLKKDFFIKRNSISQICEKCAGIGLFSF
QTNSPSGGQGHLTSIRGGGPLTTFVTSKLKNPKKNSLWSKLWLNVLPKSYFQVNGQKKIPFQSVFPWTNPKIEDLQSKGK
TTTPQDLHPLSVYWSYPRRILLRKDVENGICDVCNRSSSVLVRSYHTKTYGLSYSEGGWIHPLSPYYKSKESWFPYHPQP
GGILYHYWQTIALGKEQEDQAALVIRRFLNRKIPGEQTSILTFGYDMDNMKARCWYESEIPFFNIPSDKIEKFEEQVSQI
LNASTEVKKNLRQAVRNAWLDKKNDSKGDLTFLDVSFLKDTENSFYDLIRNVQENLISDVADFAALKETWLKLLNESACK
LFDQYADSGSFEFENIERIVKARKNLKISNLGSKTRIILGLIVSEKTSKRNKK

Sequences:

>Translated_533_residues
MNLIKDVWIPVQRFSEKLEEISPFEITSRIENDSDPVMSLSAPRPDFNGALLQFLVGLLQAVFSPENETEWEDLFVNPPS
PEVLKEAMEKVKSAFELFGDGPRFMQDTNLNEEDTVFDISALFIESPGENTIKLKKDFFIKRNSISQICEKCAGIGLFSF
QTNSPSGGQGHLTSIRGGGPLTTFVTSKLKNPKKNSLWSKLWLNVLPKSYFQVNGQKKIPFQSVFPWTNPKIEDLQSKGK
TTTPQDLHPLSVYWSYPRRILLRKDVENGICDVCNRSSSVLVRSYHTKTYGLSYSEGGWIHPLSPYYKSKESWFPYHPQP
GGILYHYWQTIALGKEQEDQAALVIRRFLNRKIPGEQTSILTFGYDMDNMKARCWYESEIPFFNIPSDKIEKFEEQVSQI
LNASTEVKKNLRQAVRNAWLDKKNDSKGDLTFLDVSFLKDTENSFYDLIRNVQENLISDVADFAALKETWLKLLNESACK
LFDQYADSGSFEFENIERIVKARKNLKISNLGSKTRIILGLIVSEKTSKRNKK
>Mature_533_residues
MNLIKDVWIPVQRFSEKLEEISPFEITSRIENDSDPVMSLSAPRPDFNGALLQFLVGLLQAVFSPENETEWEDLFVNPPS
PEVLKEAMEKVKSAFELFGDGPRFMQDTNLNEEDTVFDISALFIESPGENTIKLKKDFFIKRNSISQICEKCAGIGLFSF
QTNSPSGGQGHLTSIRGGGPLTTFVTSKLKNPKKNSLWSKLWLNVLPKSYFQVNGQKKIPFQSVFPWTNPKIEDLQSKGK
TTTPQDLHPLSVYWSYPRRILLRKDVENGICDVCNRSSSVLVRSYHTKTYGLSYSEGGWIHPLSPYYKSKESWFPYHPQP
GGILYHYWQTIALGKEQEDQAALVIRRFLNRKIPGEQTSILTFGYDMDNMKARCWYESEIPFFNIPSDKIEKFEEQVSQI
LNASTEVKKNLRQAVRNAWLDKKNDSKGDLTFLDVSFLKDTENSFYDLIRNVQENLISDVADFAALKETWLKLLNESACK
LFDQYADSGSFEFENIERIVKARKNLKISNLGSKTRIILGLIVSEKTSKRNKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789118, Length=526, Percent_Identity=22.8136882129278, Blast_Score=71, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61066; Mature: 61066

Theoretical pI: Translated: 8.09; Mature: 8.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLIKDVWIPVQRFSEKLEEISPFEITSRIENDSDPVMSLSAPRPDFNGALLQFLVGLLQ
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHH
AVFSPENETEWEDLFVNPPSPEVLKEAMEKVKSAFELFGDGPRFMQDTNLNEEDTVFDIS
HHHCCCCCCCHHHEEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCEEEEE
ALFIESPGENTIKLKKDFFIKRNSISQICEKCAGIGLFSFQTNSPSGGQGHLTSIRGGGP
EEEEECCCCCEEEEHHHHHEEHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEECCCCC
LTTFVTSKLKNPKKNSLWSKLWLNVLPKSYFQVNGQKKIPFQSVFPWTNPKIEDLQSKGK
HHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHEECCCCCCCHHHCCCCCCCCHHHHHHCCC
TTTPQDLHPLSVYWSYPRRILLRKDVENGICDVCNRSSSVLVRSYHTKTYGLSYSEGGWI
CCCCCCCCCHHEEECCCHHHHHHHHHHCCHHHHHCCCCCEEEEEECCCEECCCCCCCCCC
HPLSPYYKSKESWFPYHPQPGGILYHYWQTIALGKEQEDQAALVIRRFLNRKIPGEQTSI
CCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCEE
LTFGYDMDNMKARCWYESEIPFFNIPSDKIEKFEEQVSQILNASTEVKKNLRQAVRNAWL
EEEECCCCCCCEEEEEECCCCEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHC
DKKNDSKGDLTFLDVSFLKDTENSFYDLIRNVQENLISDVADFAALKETWLKLLNESACK
CCCCCCCCCEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFDQYADSGSFEFENIERIVKARKNLKISNLGSKTRIILGLIVSEKTSKRNKK
HHHHHCCCCCCCHHHHHHHHHHHHCCEEECCCCCCEEEEEEEHHCHHHCCCCC
>Mature Secondary Structure
MNLIKDVWIPVQRFSEKLEEISPFEITSRIENDSDPVMSLSAPRPDFNGALLQFLVGLLQ
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHH
AVFSPENETEWEDLFVNPPSPEVLKEAMEKVKSAFELFGDGPRFMQDTNLNEEDTVFDIS
HHHCCCCCCCHHHEEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCEEEEE
ALFIESPGENTIKLKKDFFIKRNSISQICEKCAGIGLFSFQTNSPSGGQGHLTSIRGGGP
EEEEECCCCCEEEEHHHHHEEHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEECCCCC
LTTFVTSKLKNPKKNSLWSKLWLNVLPKSYFQVNGQKKIPFQSVFPWTNPKIEDLQSKGK
HHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHEECCCCCCCHHHCCCCCCCCHHHHHHCCC
TTTPQDLHPLSVYWSYPRRILLRKDVENGICDVCNRSSSVLVRSYHTKTYGLSYSEGGWI
CCCCCCCCCHHEEECCCHHHHHHHHHHCCHHHHHCCCCCEEEEEECCCEECCCCCCCCCC
HPLSPYYKSKESWFPYHPQPGGILYHYWQTIALGKEQEDQAALVIRRFLNRKIPGEQTSI
CCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCEE
LTFGYDMDNMKARCWYESEIPFFNIPSDKIEKFEEQVSQILNASTEVKKNLRQAVRNAWL
EEEECCCCCCCEEEEEECCCCEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHC
DKKNDSKGDLTFLDVSFLKDTENSFYDLIRNVQENLISDVADFAALKETWLKLLNESACK
CCCCCCCCCEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFDQYADSGSFEFENIERIVKARKNLKISNLGSKTRIILGLIVSEKTSKRNKK
HHHHHCCCCCCCHHHHHHHHHHHHCCEEECCCCCCEEEEEEEHHCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA