| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is aidB [H]
Identifier: 116327391
GI number: 116327391
Start: 658791
End: 660482
Strand: Reverse
Name: aidB [H]
Synonym: LBL_0591
Alternate gene names: 116327391
Gene position: 660482-658791 (Counterclockwise)
Preceding gene: 116327392
Following gene: 116327388
Centisome position: 18.27
GC content: 43.38
Gene sequence:
>1692_bases ATGCAGTATCCTTTAAATCAAACCGCGAATCCAGGCCTTGCGCCTTTTGATATTTCGAATTATCGCGGCAATCGAGGAAA GAATTTTTACGAAGAAGACCGAGTATTACAGGCGCTTGTGGAAAAATATTCCAAAGATTATGATGTCGCACACAAGAAAG CGATGATCGAACATCTTATAGGCTATGGCGCCTTAGTAGGAGGAGTTCTCGACGAACTCACGGAAGCTTCCCACAAAGAA GGAAAGTATGGAGAAGTCGTTAAATACGATCGAACGGGAAATCGAATCGACGCGGTGATGTATTCGAACGAACAAAAACT TTCCAGGAAAATTTCCTATGACTATGGAATCGTCAATCTCAATTATCATTCCTCCTGGAAACATCCTTTCACCGACTTAC ATCGTTACGCGCTCGCCTATCTTGCTAACCAAAACGGAGAAGGAGGAGTCACTTGCCCTCTTGCAATGACCGAAGGTATG ATCAAAGTTTTGGAAGCGCTTGGAACTCCCGAACAAAAAGACAAATACCTATCTCTTGTCGCAGGAGAAGGAAGCGATTC TCACTTTATGGCGGGACAGTACGTGACTGAAAGAGTCGGCGGTTCCAACGTAAGCGCAAATCGAACGATCGCAAGGAAAC AGGAAAACGGCAAATGGATTCTTACCGGAGAAAAATGGTTCTGCTCCAATCCGGGAGATCTTTGGGTAACCACGGCAAGA GTGGAAGATACAAACACGATCGGAATGTTTTTAGTCCCGAGAATCAAAGATGATGGAACTTTAAACGGACATCACATTCT CCGCAAAAAAGACATTATCGGTTCCAGAGGAAAGCTTACCGTCGAAATTATTTATGACGGAGTCGAAGCAGAAGCCCTAG GAAGACCTGCCCACGGAATTGCGAACCTTATGAAATATGTGATCGGAATTTCTAGATTACACGTATCGCTTGCCGCCTCC GGAATTTCCAGAAGAGCCTGGATGGAGGCCTATGAATACGCAAAGTTTAGAACCGCCTATGGAAGTAAAATATTAGAATT TTCTTCTTTACTAAAGCAGCTAAGCGATCAAAGACTCAAACACACCGCAATGTTGACTTCCATCTTTAGGCATTTTCATA CTCCAGAACCGTTAAAACTTGCAGGAGAAATACTGGCTCCTCTTCTGAAGTATAAATGCTCCGCTACTTCCACTGAGATT ACATACAATTCGATCCTTGTATTGGGCGGTAACGGAATTGTGGGGGATTTCTCCGCACTTCCCAGATTACATAACGATTC CATCATCAATGAGACGTGGGAAGGAACACATCTACTGTTAAGCGAACACGTTCTTCGCGGATTTAAAAGGGAAAAGGTGG CAAAAGCGTTCTTCAGATATGTGGAAGAGATAACGGATTCAAAAGCCGCGGAAACGATCCGGAAAAAATCGGCGCTTTTA CAAGAATTACTGGACAATTCAAGTTCAGAAGAATTGGATCTGAATCGGATTTACATCGCGGATTTAGCTTTTGAAACGTT CTCTCTAGCGGCCCTATCGGACCTTTCCGGTAAAAACTCTCCAAATCTTCAAAAGGATATGTCCATATTTCGAGACGGTT ATCTGGATTTGATCCATTCTTCTCACTCGTTTTCAAAAGTAGGAAGTTTTTCAGGAAACGCCGAACGCCTCAAATCGGTG ATTCATTTCTAA
Upstream 100 bases:
>100_bases TGAAAACGAAGGTGGACTTATACTTTCCAAAGAATTTCCTTTTAAAAGCAAAGATAGAGTGATTCGCTTCTAAAAAAGTT CAGCGAATTAGGAGAGAATG
Downstream 100 bases:
>100_bases AAAGAATTTTAGAATTTGCTCATAAACTCAGACTATCGTGATCCGTGCGACTCTAAAAAAATCCACGGATTCCGTTTCTC GACTTTTTTACGACTTGTTC
Product: Acyl-CoA dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 563; Mature: 563
Protein sequence:
>563_residues MQYPLNQTANPGLAPFDISNYRGNRGKNFYEEDRVLQALVEKYSKDYDVAHKKAMIEHLIGYGALVGGVLDELTEASHKE GKYGEVVKYDRTGNRIDAVMYSNEQKLSRKISYDYGIVNLNYHSSWKHPFTDLHRYALAYLANQNGEGGVTCPLAMTEGM IKVLEALGTPEQKDKYLSLVAGEGSDSHFMAGQYVTERVGGSNVSANRTIARKQENGKWILTGEKWFCSNPGDLWVTTAR VEDTNTIGMFLVPRIKDDGTLNGHHILRKKDIIGSRGKLTVEIIYDGVEAEALGRPAHGIANLMKYVIGISRLHVSLAAS GISRRAWMEAYEYAKFRTAYGSKILEFSSLLKQLSDQRLKHTAMLTSIFRHFHTPEPLKLAGEILAPLLKYKCSATSTEI TYNSILVLGGNGIVGDFSALPRLHNDSIINETWEGTHLLLSEHVLRGFKREKVAKAFFRYVEEITDSKAAETIRKKSALL QELLDNSSSEELDLNRIYIADLAFETFSLAALSDLSGKNSPNLQKDMSIFRDGYLDLIHSSHSFSKVGSFSGNAERLKSV IHF
Sequences:
>Translated_563_residues MQYPLNQTANPGLAPFDISNYRGNRGKNFYEEDRVLQALVEKYSKDYDVAHKKAMIEHLIGYGALVGGVLDELTEASHKE GKYGEVVKYDRTGNRIDAVMYSNEQKLSRKISYDYGIVNLNYHSSWKHPFTDLHRYALAYLANQNGEGGVTCPLAMTEGM IKVLEALGTPEQKDKYLSLVAGEGSDSHFMAGQYVTERVGGSNVSANRTIARKQENGKWILTGEKWFCSNPGDLWVTTAR VEDTNTIGMFLVPRIKDDGTLNGHHILRKKDIIGSRGKLTVEIIYDGVEAEALGRPAHGIANLMKYVIGISRLHVSLAAS GISRRAWMEAYEYAKFRTAYGSKILEFSSLLKQLSDQRLKHTAMLTSIFRHFHTPEPLKLAGEILAPLLKYKCSATSTEI TYNSILVLGGNGIVGDFSALPRLHNDSIINETWEGTHLLLSEHVLRGFKREKVAKAFFRYVEEITDSKAAETIRKKSALL QELLDNSSSEELDLNRIYIADLAFETFSLAALSDLSGKNSPNLQKDMSIFRDGYLDLIHSSHSFSKVGSFSGNAERLKSV IHF >Mature_563_residues MQYPLNQTANPGLAPFDISNYRGNRGKNFYEEDRVLQALVEKYSKDYDVAHKKAMIEHLIGYGALVGGVLDELTEASHKE GKYGEVVKYDRTGNRIDAVMYSNEQKLSRKISYDYGIVNLNYHSSWKHPFTDLHRYALAYLANQNGEGGVTCPLAMTEGM IKVLEALGTPEQKDKYLSLVAGEGSDSHFMAGQYVTERVGGSNVSANRTIARKQENGKWILTGEKWFCSNPGDLWVTTAR VEDTNTIGMFLVPRIKDDGTLNGHHILRKKDIIGSRGKLTVEIIYDGVEAEALGRPAHGIANLMKYVIGISRLHVSLAAS GISRRAWMEAYEYAKFRTAYGSKILEFSSLLKQLSDQRLKHTAMLTSIFRHFHTPEPLKLAGEILAPLLKYKCSATSTEI TYNSILVLGGNGIVGDFSALPRLHNDSIINETWEGTHLLLSEHVLRGFKREKVAKAFFRYVEEITDSKAAETIRKKSALL QELLDNSSSEELDLNRIYIADLAFETFSLAALSDLSGKNSPNLQKDMSIFRDGYLDLIHSSHSFSKVGSFSGNAERLKSV IHF
Specific function: May help to prevent alkylation damage by protecting DNA and destroying alkylating agents [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acyl-CoA dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI4557233, Length=304, Percent_Identity=26.3157894736842, Blast_Score=79, Evalue=8e-15, Organism=Escherichia coli, GI87082384, Length=381, Percent_Identity=26.509186351706, Blast_Score=121, Evalue=2e-28, Organism=Caenorhabditis elegans, GI86563381, Length=478, Percent_Identity=26.5690376569038, Blast_Score=141, Evalue=8e-34, Organism=Caenorhabditis elegans, GI86563383, Length=478, Percent_Identity=26.5690376569038, Blast_Score=141, Evalue=9e-34, Organism=Caenorhabditis elegans, GI17538396, Length=293, Percent_Identity=27.6450511945392, Blast_Score=83, Evalue=3e-16, Organism=Drosophila melanogaster, GI21356377, Length=303, Percent_Identity=25.4125412541254, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI21355753, Length=292, Percent_Identity=26.3698630136986, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI281363737, Length=287, Percent_Identity=26.8292682926829, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006089 - InterPro: IPR006090 - InterPro: IPR006091 - InterPro: IPR009075 - InterPro: IPR009100 [H]
Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M [H]
EC number: NA
Molecular weight: Translated: 62924; Mature: 62924
Theoretical pI: Translated: 8.12; Mature: 8.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQYPLNQTANPGLAPFDISNYRGNRGKNFYEEDRVLQALVEKYSKDYDVAHKKAMIEHLI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH GYGALVGGVLDELTEASHKEGKYGEVVKYDRTGNRIDAVMYSNEQKLSRKISYDYGIVNL HHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEEEEECCHHHHHHHHCCCEEEEEE NYHSSWKHPFTDLHRYALAYLANQNGEGGVTCPLAMTEGMIKVLEALGTPEQKDKYLSLV CCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCEEEEE AGEGSDSHFMAGQYVTERVGGSNVSANRTIARKQENGKWILTGEKWFCSNPGDLWVTTAR ECCCCCCCEECHHHHHHHCCCCCCCCCCHHHEECCCCCEEEECCEEEECCCCCEEEEEEE VEDTNTIGMFLVPRIKDDGTLNGHHILRKKDIIGSRGKLTVEIIYDGVEAEALGRPAHGI ECCCCCEEEEEEEEECCCCCCCCCEEEEHHHCCCCCCCEEEEEEECCCCHHHCCCCHHHH ANLMKYVIGISRLHVSLAASGISRRAWMEAYEYAKFRTAYGSKILEFSSLLKQLSDQRLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HTAMLTSIFRHFHTPEPLKLAGEILAPLLKYKCSATSTEITYNSILVLGGNGIVGDFSAL HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCEECHHHC PRLHNDSIINETWEGTHLLLSEHVLRGFKREKVAKAFFRYVEEITDSKAAETIRKKSALL CCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH QELLDNSSSEELDLNRIYIADLAFETFSLAALSDLSGKNSPNLQKDMSIFRDGYLDLIHS HHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHC SHSFSKVGSFSGNAERLKSVIHF CCCHHHHCCCCCCHHHHHHHHCC >Mature Secondary Structure MQYPLNQTANPGLAPFDISNYRGNRGKNFYEEDRVLQALVEKYSKDYDVAHKKAMIEHLI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH GYGALVGGVLDELTEASHKEGKYGEVVKYDRTGNRIDAVMYSNEQKLSRKISYDYGIVNL HHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEEEEECCHHHHHHHHCCCEEEEEE NYHSSWKHPFTDLHRYALAYLANQNGEGGVTCPLAMTEGMIKVLEALGTPEQKDKYLSLV CCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCEEEEE AGEGSDSHFMAGQYVTERVGGSNVSANRTIARKQENGKWILTGEKWFCSNPGDLWVTTAR ECCCCCCCEECHHHHHHHCCCCCCCCCCHHHEECCCCCEEEECCEEEECCCCCEEEEEEE VEDTNTIGMFLVPRIKDDGTLNGHHILRKKDIIGSRGKLTVEIIYDGVEAEALGRPAHGI ECCCCCEEEEEEEEECCCCCCCCCEEEEHHHCCCCCCCEEEEEEECCCCHHHCCCCHHHH ANLMKYVIGISRLHVSLAASGISRRAWMEAYEYAKFRTAYGSKILEFSSLLKQLSDQRLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HTAMLTSIFRHFHTPEPLKLAGEILAPLLKYKCSATSTEITYNSILVLGGNGIVGDFSAL HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCEECHHHC PRLHNDSIINETWEGTHLLLSEHVLRGFKREKVAKAFFRYVEEITDSKAAETIRKKSALL CCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH QELLDNSSSEELDLNRIYIADLAFETFSLAALSDLSGKNSPNLQKDMSIFRDGYLDLIHS HHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHC SHSFSKVGSFSGNAERLKSVIHF CCCHHHHCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7961409; 7610040; 9278503 [H]