| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116327307
Identifier: 116327307
GI number: 116327307
Start: 549053
End: 549985
Strand: Reverse
Name: 116327307
Synonym: LBL_0499
Alternate gene names: NA
Gene position: 549985-549053 (Counterclockwise)
Preceding gene: 116327308
Following gene: 116327306
Centisome position: 15.22
GC content: 38.16
Gene sequence:
>933_bases TTGAAAGATCCCCGTTCAAGAACTTGCTCTTTTACGATTTTTCTTTTTAAAATACGGTTTCTTGCGCTTCTGCTGATTTT TTGCTCGGAAGGTAATTCCGTTTTTCCCGAAAGTAAACTTGAGAACTGGAATCCTTTTTCCATCCAAAAAGGGTCGAGCG AAACAACGATCGATTTCGAAACGGTCTTAAAAACATTTGAAAATTATGATATTCTGATATTTGGGGAGGAACACGACGAT ATTATCGGTCATAAAATCCGCTTAGATTGGTTTAAAAAGATTGCTTTAAAAACCCCTGTAATTCTTTCTCTGGAAATGTT GGAAAGGGACCAACAAAAAACCTTAGACGAATATTTAAACGGTCAAATCGGAGAGAAAACTTTTCTCAATTCCTTAACAC TTTGGCCCAACTATTTAAGAGACTATCATCCTTTTATACAATTTGCAAAAGAACACAGGATTCCGGTTCTTGCATCCAAC GTACCTAGAAAATACGTAAATCTAGTTTCCACTTCCGGACTCGAAGCATTATTTAAAATTCGTTCTGTTTTTCTACCTCC TAAATATCTAGTTCGTGCGCTCTCTCAGGAAGCTTACGAGACTAAAATAAAAAACACCCTCAAAGAACATCCCGGCGTAA ATTTAGACGCAAATACCGAAAAAAAATTCGTGGATGCTCAATATCTTTGGGATGCAGGAATGACCGATTCGATCGCGAAT GCATTTTTGACAAAAGGGCGCAAGGTGATCCATATCAACGGTCGTTTTCATAGCGACGAGGGTTTTGGCGTCGTTTATAG ACTGCGTAAACTTGGATTTAGAACCCTTTCGATTTCCATGTTTCCTTTAAAAGAAGACAGCATAGTTCCGGCTGAAATAC TCAAGGGTTGCGATTTTACCGTGATTACGGAAAGGGGAAAAAAAGAGAATTAA
Upstream 100 bases:
>100_bases AAGGAAGGAAAAGTCGAAGCGAGATATCGCTCCGCGGTAGAGCCGGATGCTTCGGTCGTAGCCCAGAAAATCGAATCTCT TTTAAAGTAGGTTTTTAATT
Downstream 100 bases:
>100_bases AATACTTGTCTGGAACTCTAGGATTCTCCGACAATTAAGGGGATAATGGAAACGGGAATTCAAACTCTTAGAAGTTCTCG ATTTTTGTGTCCCGAATGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 310; Mature: 310
Protein sequence:
>310_residues MKDPRSRTCSFTIFLFKIRFLALLLIFCSEGNSVFPESKLENWNPFSIQKGSSETTIDFETVLKTFENYDILIFGEEHDD IIGHKIRLDWFKKIALKTPVILSLEMLERDQQKTLDEYLNGQIGEKTFLNSLTLWPNYLRDYHPFIQFAKEHRIPVLASN VPRKYVNLVSTSGLEALFKIRSVFLPPKYLVRALSQEAYETKIKNTLKEHPGVNLDANTEKKFVDAQYLWDAGMTDSIAN AFLTKGRKVIHINGRFHSDEGFGVVYRLRKLGFRTLSISMFPLKEDSIVPAEILKGCDFTVITERGKKEN
Sequences:
>Translated_310_residues MKDPRSRTCSFTIFLFKIRFLALLLIFCSEGNSVFPESKLENWNPFSIQKGSSETTIDFETVLKTFENYDILIFGEEHDD IIGHKIRLDWFKKIALKTPVILSLEMLERDQQKTLDEYLNGQIGEKTFLNSLTLWPNYLRDYHPFIQFAKEHRIPVLASN VPRKYVNLVSTSGLEALFKIRSVFLPPKYLVRALSQEAYETKIKNTLKEHPGVNLDANTEKKFVDAQYLWDAGMTDSIAN AFLTKGRKVIHINGRFHSDEGFGVVYRLRKLGFRTLSISMFPLKEDSIVPAEILKGCDFTVITERGKKEN >Mature_310_residues MKDPRSRTCSFTIFLFKIRFLALLLIFCSEGNSVFPESKLENWNPFSIQKGSSETTIDFETVLKTFENYDILIFGEEHDD IIGHKIRLDWFKKIALKTPVILSLEMLERDQQKTLDEYLNGQIGEKTFLNSLTLWPNYLRDYHPFIQFAKEHRIPVLASN VPRKYVNLVSTSGLEALFKIRSVFLPPKYLVRALSQEAYETKIKNTLKEHPGVNLDANTEKKFVDAQYLWDAGMTDSIAN AFLTKGRKVIHINGRFHSDEGFGVVYRLRKLGFRTLSISMFPLKEDSIVPAEILKGCDFTVITERGKKEN
Specific function: Unknown
COG id: COG3016
COG function: function code S; Uncharacterized iron-regulated protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35815; Mature: 35815
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDPRSRTCSFTIFLFKIRFLALLLIFCSEGNSVFPESKLENWNPFSIQKGSSETTIDFE CCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCEEECCCCCCEEEHH TVLKTFENYDILIFGEEHDDIIGHKIRLDWFKKIALKTPVILSLEMLERDQQKTLDEYLN HHHHHHCCCEEEEECCCCCCHHCCEEHHHHHHHHHHCCCHHEEHHHHHHHHHHHHHHHHC GQIGEKTFLNSLTLWPNYLRDYHPFIQFAKEHRIPVLASNVPRKYVNLVSTSGLEALFKI CCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHCCHHHHHHHH RSVFLPPKYLVRALSQEAYETKIKNTLKEHPGVNLDANTEKKFVDAQYLWDAGMTDSIAN HHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHH AFLTKGRKVIHINGRFHSDEGFGVVYRLRKLGFRTLSISMFPLKEDSIVPAEILKGCDFT HHHHCCCEEEEECCEEECCCCCHHHHHHHHCCCEEEEEEEEECCCCCCCHHHHHCCCCEE VITERGKKEN EEECCCCCCC >Mature Secondary Structure MKDPRSRTCSFTIFLFKIRFLALLLIFCSEGNSVFPESKLENWNPFSIQKGSSETTIDFE CCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCEEECCCCCCEEEHH TVLKTFENYDILIFGEEHDDIIGHKIRLDWFKKIALKTPVILSLEMLERDQQKTLDEYLN HHHHHHCCCEEEEECCCCCCHHCCEEHHHHHHHHHHCCCHHEEHHHHHHHHHHHHHHHHC GQIGEKTFLNSLTLWPNYLRDYHPFIQFAKEHRIPVLASNVPRKYVNLVSTSGLEALFKI CCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHCCHHHHHHHH RSVFLPPKYLVRALSQEAYETKIKNTLKEHPGVNLDANTEKKFVDAQYLWDAGMTDSIAN HHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHH AFLTKGRKVIHINGRFHSDEGFGVVYRLRKLGFRTLSISMFPLKEDSIVPAEILKGCDFT HHHHCCCEEEEECCEEECCCCCHHHHHHHHCCCEEEEEEEEECCCCCCCHHHHHCCCCEE VITERGKKEN EEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA