| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116327305
Identifier: 116327305
GI number: 116327305
Start: 544702
End: 546279
Strand: Reverse
Name: 116327305
Synonym: LBL_0497
Alternate gene names: NA
Gene position: 546279-544702 (Counterclockwise)
Preceding gene: 116327306
Following gene: 116327304
Centisome position: 15.11
GC content: 39.99
Gene sequence:
>1578_bases ATGTATTTTAAATTTTTTTATTTCATTATAATATTATTATATTCTTTCTCAAGTGCACATCCCGTTTCCTACGAAGAGGC GTACACAATGGAAAAAGAGGATCCACTGTTTTCGATTCCTTTGTATGAGGAACTTCTTCGAACGTCTAAAAAGTCCGATA TCCGTAAAACGGCGTCTTCCAGACTTTTTTTCCTCTACGAAAAATACCGCAAATATGTTCCCGCGATCTTAATCATGATT CGTTCGGGAAAAATTACGGATAAAAAAGGAAGATATCCCTCGATTATCAACGAACTTGCAGACGGTTTAAACGTAAGTCC TTCCGCACTCGTCTCCGTTATTTCCGGTTGTAATAAACCGATTTCGAATCCGGACATATACTTTCAAGAAACAAACCCGC CCCAAACCGAAGAGGAATCCGTTTCCATCGGAACCTCTTCGATACAAACTCCCGAGCCCGTCGTAGTTCAAGAAATACCT TTCTTATTCAAAATTCTTTCCAAAAAAGAGAATGCCTCTCTCTATAAGGTTTGTTATGCGGTAAAAATTAAAACGGGCGA TTACGACGGTTGGGAGAAAATCCACGCTTTCGGAGAGATGAAAGGAATTATCAACCCGCAAACCTCTTTGGCTTTGCGCA TCAGCTTCACCATTCACTCAGGAAGAGGAAGTGCTTATAAAAGAATTTATTCCGGAGGTAGACTGAAATCGTTAAACGAA GAAGGTAAATCGGATCTTTTGTATCTCTACGGGAAATTTCTCAGAAACTTGGGGAAGTACGATTCTTCCGCGAGGTATTT TTGGATGAGCGGTTCTTACGCGAGCAAAGACCGAAGCGCAATCGAAACCGCAAAAACTCTTTTAATTTCGGGAAGAAAAC AAGAAGCTTGTTCATATCTTACGAAAGGTTTTTTCCCCGGGGACGAATCAGAAGAACTTTTATCCAGAGTTTGCTTTAAA AATTTTGAAAATACACATCCAGGTCAGGGATTTTTAAAAGCCATAAAAATATTAAACAACGATATTCCCGATCCGGTATT CGAATACTTTTTGGGAAAAGGAATCTCCGATAAAATCGAAGAACCGGATACGGATCATTCGAACGAACTTCCCTCGAGTT ACGGCAAACTTCTAGATGAAAAACTGTTTTCCGGCGAAAAGAATCCGACTCCTTTTTGGGATTATCGCAAAAAGGAAGGA ACGCTTTTTTTATCCGCCGTACCTCGGTTTCTTTGTAAATCCAATCGCTCCAGTCTATTTAAGAAAGATCTAATACAACC TCAGAACTGCGTTCCTTATTCGGAGTTTTCCACAGATGCAATCCTCACGACTCCGTTATTCGAATCCGACCAGGAAGAAT GGAGTTTGATTCTTTCCAACGCGGCTTACAATCCGATTTCCGGCCAAGCAGTGTTTGCGGATTCGGACGGTGTAGAGACC TCCTTGCAAATGTCGAATTTAGTATATCGTAAATCTCTCAATCGTTTTTTTATCGATGGATTTTCAGGCGACAAGAAATA CAAATTTTACTCGATCGACCTGAAAAAGATTTCAGTAAACATATTGAATTCCGATTGA
Upstream 100 bases:
>100_bases TGTAAACATCCCCGAAAAGAACTTTTCAAAAATGGAACCGTACCCTCCGAAATTTGCCCTTTAAATCACGGAACAGACGT AAAGCGGGAAGTTCTCAGAA
Downstream 100 bases:
>100_bases TTTTAAAATCGTATCATCTGACTCAAGAACGATTCTGATTCGTCCAAATCCGGAAAATTGTCTTCCTATCTCCCCGATCC GGATTATAGTTTTATGCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 525; Mature: 525
Protein sequence:
>525_residues MYFKFFYFIIILLYSFSSAHPVSYEEAYTMEKEDPLFSIPLYEELLRTSKKSDIRKTASSRLFFLYEKYRKYVPAILIMI RSGKITDKKGRYPSIINELADGLNVSPSALVSVISGCNKPISNPDIYFQETNPPQTEEESVSIGTSSIQTPEPVVVQEIP FLFKILSKKENASLYKVCYAVKIKTGDYDGWEKIHAFGEMKGIINPQTSLALRISFTIHSGRGSAYKRIYSGGRLKSLNE EGKSDLLYLYGKFLRNLGKYDSSARYFWMSGSYASKDRSAIETAKTLLISGRKQEACSYLTKGFFPGDESEELLSRVCFK NFENTHPGQGFLKAIKILNNDIPDPVFEYFLGKGISDKIEEPDTDHSNELPSSYGKLLDEKLFSGEKNPTPFWDYRKKEG TLFLSAVPRFLCKSNRSSLFKKDLIQPQNCVPYSEFSTDAILTTPLFESDQEEWSLILSNAAYNPISGQAVFADSDGVET SLQMSNLVYRKSLNRFFIDGFSGDKKYKFYSIDLKKISVNILNSD
Sequences:
>Translated_525_residues MYFKFFYFIIILLYSFSSAHPVSYEEAYTMEKEDPLFSIPLYEELLRTSKKSDIRKTASSRLFFLYEKYRKYVPAILIMI RSGKITDKKGRYPSIINELADGLNVSPSALVSVISGCNKPISNPDIYFQETNPPQTEEESVSIGTSSIQTPEPVVVQEIP FLFKILSKKENASLYKVCYAVKIKTGDYDGWEKIHAFGEMKGIINPQTSLALRISFTIHSGRGSAYKRIYSGGRLKSLNE EGKSDLLYLYGKFLRNLGKYDSSARYFWMSGSYASKDRSAIETAKTLLISGRKQEACSYLTKGFFPGDESEELLSRVCFK NFENTHPGQGFLKAIKILNNDIPDPVFEYFLGKGISDKIEEPDTDHSNELPSSYGKLLDEKLFSGEKNPTPFWDYRKKEG TLFLSAVPRFLCKSNRSSLFKKDLIQPQNCVPYSEFSTDAILTTPLFESDQEEWSLILSNAAYNPISGQAVFADSDGVET SLQMSNLVYRKSLNRFFIDGFSGDKKYKFYSIDLKKISVNILNSD >Mature_525_residues MYFKFFYFIIILLYSFSSAHPVSYEEAYTMEKEDPLFSIPLYEELLRTSKKSDIRKTASSRLFFLYEKYRKYVPAILIMI RSGKITDKKGRYPSIINELADGLNVSPSALVSVISGCNKPISNPDIYFQETNPPQTEEESVSIGTSSIQTPEPVVVQEIP FLFKILSKKENASLYKVCYAVKIKTGDYDGWEKIHAFGEMKGIINPQTSLALRISFTIHSGRGSAYKRIYSGGRLKSLNE EGKSDLLYLYGKFLRNLGKYDSSARYFWMSGSYASKDRSAIETAKTLLISGRKQEACSYLTKGFFPGDESEELLSRVCFK NFENTHPGQGFLKAIKILNNDIPDPVFEYFLGKGISDKIEEPDTDHSNELPSSYGKLLDEKLFSGEKNPTPFWDYRKKEG TLFLSAVPRFLCKSNRSSLFKKDLIQPQNCVPYSEFSTDAILTTPLFESDQEEWSLILSNAAYNPISGQAVFADSDGVET SLQMSNLVYRKSLNRFFIDGFSGDKKYKFYSIDLKKISVNILNSD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59665; Mature: 59665
Theoretical pI: Translated: 8.26; Mature: 8.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYFKFFYFIIILLYSFSSAHPVSYEEAYTMEKEDPLFSIPLYEELLRTSKKSDIRKTASS CHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHH RLFFLYEKYRKYVPAILIMIRSGKITDKKGRYPSIINELADGLNVSPSALVSVISGCNKP HHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCC ISNPDIYFQETNPPQTEEESVSIGTSSIQTPEPVVVQEIPFLFKILSKKENASLYKVCYA CCCCCEEEECCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEE VKIKTGDYDGWEKIHAFGEMKGIINPQTSLALRISFTIHSGRGSAYKRIYSGGRLKSLNE EEEECCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCHHHHHHHCCCCCCCCCC EGKSDLLYLYGKFLRNLGKYDSSARYFWMSGSYASKDRSAIETAKTLLISGRKQEACSYL CCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHH TKGFFPGDESEELLSRVCFKNFENTHPGQGFLKAIKILNNDIPDPVFEYFLGKGISDKIE HHCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCC EPDTDHSNELPSSYGKLLDEKLFSGEKNPTPFWDYRKKEGTLFLSAVPRFLCKSNRSSLF CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHCCHHHHH KKDLIQPQNCVPYSEFSTDAILTTPLFESDQEEWSLILSNAAYNPISGQAVFADSDGVET HHHCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCEEEECCCCCCH SLQMSNLVYRKSLNRFFIDGFSGDKKYKFYSIDLKKISVNILNSD HHHHHHHHHHHHCCCEEEECCCCCCEEEEEEEEEEEEEEEEECCC >Mature Secondary Structure MYFKFFYFIIILLYSFSSAHPVSYEEAYTMEKEDPLFSIPLYEELLRTSKKSDIRKTASS CHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHH RLFFLYEKYRKYVPAILIMIRSGKITDKKGRYPSIINELADGLNVSPSALVSVISGCNKP HHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCC ISNPDIYFQETNPPQTEEESVSIGTSSIQTPEPVVVQEIPFLFKILSKKENASLYKVCYA CCCCCEEEECCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEE VKIKTGDYDGWEKIHAFGEMKGIINPQTSLALRISFTIHSGRGSAYKRIYSGGRLKSLNE EEEECCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCHHHHHHHCCCCCCCCCC EGKSDLLYLYGKFLRNLGKYDSSARYFWMSGSYASKDRSAIETAKTLLISGRKQEACSYL CCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHH TKGFFPGDESEELLSRVCFKNFENTHPGQGFLKAIKILNNDIPDPVFEYFLGKGISDKIE HHCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCC EPDTDHSNELPSSYGKLLDEKLFSGEKNPTPFWDYRKKEGTLFLSAVPRFLCKSNRSSLF CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHCCHHHHH KKDLIQPQNCVPYSEFSTDAILTTPLFESDQEEWSLILSNAAYNPISGQAVFADSDGVET HHHCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCEEEECCCCCCH SLQMSNLVYRKSLNRFFIDGFSGDKKYKFYSIDLKKISVNILNSD HHHHHHHHHHHHCCCEEEECCCCCCEEEEEEEEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA