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The map label for this gene is 116327183

Identifier: 116327183

GI number: 116327183

Start: 424224

End: 424832

Strand: Direct

Name: 116327183

Synonym: LBL_0362

Alternate gene names: NA

Gene position: 424224-424832 (Clockwise)

Preceding gene: 116327182

Following gene: 116327188

Centisome position: 11.74

GC content: 47.45

Gene sequence:

>609_bases
ATGGGCAAGGAAGAAAAACTAAGAAGACTCGACCTCATTCAATCCGAGGTGTTCGCGTGTAAACTCTGCAAACTCCATAC
GACCCGCACTCGAACGGTTTTTGGAGAAGGAAATCCGGATTCGAAAGTGGTTTTCATCGGAGAAGGTCCCGGTAAACAAG
AGGATCTTACCGGCCGTCCTTTCGTGGGCAGAGCCGGTGAACTACTTACAAGAATCATAGAAAAGGGAATGAAAGTTCCG
AGAGAATCGGTTTACATCGCGAACATTGTGAAGTGTAGACCGACCGTGGATATGAAATTCGAAAAGGATAGACCTCCCGA
AGACGAGGAAACCAGAGCCTGTGCCCCGTATCTTCTGAGGCAACTTGAAATCATCCAACCGAAAGTGATCGTAACACTTG
GAAATCCCTCTACAAGATTTATCTTAAATACAAAAGAGGGAATTACGAAACTCAGAGGGACCTGGGGAACTTTTTTCGGA
ATTCCTGTGATGCCTACGTATCACCCCAGTTTTGTGATTCGCAACGGCGGAGAGAACAGCCCTCTCAAACGGGAGGTCTG
GGAGGACATCAAGAAGGTTATGGATCTGCTGGGCTGGAAGTGGTCTTAG

Upstream 100 bases:

>100_bases
GCGTATACGTATTGTGGAATATAAAGTCCCGTTTCTATAGGATGAGCATTTCCATTGACTTCGTAGAAATTCTTTATCAA
ATTGGATGGAACGTATTTTC

Downstream 100 bases:

>100_bases
CGATTTCTTTTTCTTTCAACCAATCGGCTATTCTTTGATAAATGTCGGAAGGAGCGTCTTTGTAGGCGAAAAGTCCCAAA
TGATCGTAGTCGATCGACGT

Product: Uracil-DNA glycosylase

Products: diphosphate; DNAn+1

Alternate protein names: Uracil-DNA Glycosylase; Phage SPO1 DNA Polymerase-Like Protein; DNA Polymerase; DNA Polymerase Bacteriophage-Type; DNA-Directed DNA Polymerase; Uracil DNA Glycosylase Superfamily Protein; Phage Spo1 DNA Polymerase-Related Protein; DNA Polymerase-Related Protein Bacteriophage-Type; Uracil-DNA Glycosylase Family 4 Protein; DNA Polymerase-Related Protein; Phage SPO1 DNA Polymerase Domain-Containing Protein; Uracil-DNA Glycosylase Phage-Related Protein; Phage Shock Protein E; DNA Polymerase Domain-Containing Protein; Phage DNA Polymerase; C-Terminal Part Of DNA Polymerase Bacteriophage-Type; Phage Spo1 DNA Polymerase Domain Protein; Phage Related DNA Polymerase; Uracil-DNA Glycosylase-Like Protein; DNA Glycosylase; Uracil-DNA Glycosylase C-Terminal; Uracil-DNA Glycosylase-Related Protein; Phage SpO1 DNA Polymerase-Related Protein; Bacteriophage-Type DNA Polymerase N-Terminal Domain Protein; N-Terminus Of Phage SPO1 DNA Polymerase; Bacteriophage-Related DNA Polymerase; Bacteriophage-Type DNA Polymerase; DNA Polymerase Related Protein; DNA-Directed DNA Polymerase Bacteriophage-Type

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MGKEEKLRRLDLIQSEVFACKLCKLHTTRTRTVFGEGNPDSKVVFIGEGPGKQEDLTGRPFVGRAGELLTRIIEKGMKVP
RESVYIANIVKCRPTVDMKFEKDRPPEDEETRACAPYLLRQLEIIQPKVIVTLGNPSTRFILNTKEGITKLRGTWGTFFG
IPVMPTYHPSFVIRNGGENSPLKREVWEDIKKVMDLLGWKWS

Sequences:

>Translated_202_residues
MGKEEKLRRLDLIQSEVFACKLCKLHTTRTRTVFGEGNPDSKVVFIGEGPGKQEDLTGRPFVGRAGELLTRIIEKGMKVP
RESVYIANIVKCRPTVDMKFEKDRPPEDEETRACAPYLLRQLEIIQPKVIVTLGNPSTRFILNTKEGITKLRGTWGTFFG
IPVMPTYHPSFVIRNGGENSPLKREVWEDIKKVMDLLGWKWS
>Mature_201_residues
GKEEKLRRLDLIQSEVFACKLCKLHTTRTRTVFGEGNPDSKVVFIGEGPGKQEDLTGRPFVGRAGELLTRIIEKGMKVPR
ESVYIANIVKCRPTVDMKFEKDRPPEDEETRACAPYLLRQLEIIQPKVIVTLGNPSTRFILNTKEGITKLRGTWGTFFGI
PVMPTYHPSFVIRNGGENSPLKREVWEDIKKVMDLLGWKWS

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 23031; Mature: 22900

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKEEKLRRLDLIQSEVFACKLCKLHTTRTRTVFGEGNPDSKVVFIGEGPGKQEDLTGRP
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCCC
FVGRAGELLTRIIEKGMKVPRESVYIANIVKCRPTVDMKFEKDRPPEDEETRACAPYLLR
CCCCHHHHHHHHHHHHHCCCCHHEEEEHEEEECCCCCCEECCCCCCCCCHHHHHHHHHHH
QLEIIQPKVIVTLGNPSTRFILNTKEGITKLRGTWGTFFGIPVMPTYHPSFVIRNGGENS
HHHHCCCEEEEEECCCCEEEEEECHHHHHHHHCCCCCEECCCCCCCCCCCEEEECCCCCC
PLKREVWEDIKKVMDLLGWKWS
CHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
GKEEKLRRLDLIQSEVFACKLCKLHTTRTRTVFGEGNPDSKVVFIGEGPGKQEDLTGRP
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCCC
FVGRAGELLTRIIEKGMKVPRESVYIANIVKCRPTVDMKFEKDRPPEDEETRACAPYLLR
CCCCHHHHHHHHHHHHHCCCCHHEEEEHEEEECCCCCCEECCCCCCCCCHHHHHHHHHHH
QLEIIQPKVIVTLGNPSTRFILNTKEGITKLRGTWGTFFGIPVMPTYHPSFVIRNGGENS
HHHHCCCEEEEEECCCCEEEEEECHHHHHHHHCCCCCEECCCCCCCCCCCEEEECCCCCC
PLKREVWEDIKKVMDLLGWKWS
CHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA