| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is ycbL [C]
Identifier: 116327151
GI number: 116327151
Start: 383668
End: 384822
Strand: Direct
Name: ycbL [C]
Synonym: LBL_0327
Alternate gene names: 116327151
Gene position: 383668-384822 (Clockwise)
Preceding gene: 116327150
Following gene: 116327154
Centisome position: 10.61
GC content: 40.09
Gene sequence:
>1155_bases ATGAAATCGTTTCCGCCCGTTTCATCGTTATTCCCGAAAAATAACGGAAAAACAATCATTTACTTTTGGATACGTTACTG GACGTTATTTTTTATTTTTCTTCCCTGGATATTGGTCCGGCAGATAGGAATTTCTTTTTCTAATCTATTGGCTGCATTAT GGACTTGGAATAAAGAAATTATTTTACTCTCGGATACGTTACGATTAATTTACATGAATAATGTTTCTTCTTTATTCCTG TCCGTGATTTTCGGAGAACGTTTTACGGCTATTCATTACCGTGATATATTGTTTGATCCTGGACCTATTTTTAGTTGGAA AAAAATAAAAAAGTACGTCGTAAGACGATCAAGCGACATTCATACGCTTGTCCTTACCCACGCGCATGAAGAACATGTCG GGAACGTCTCTACGGTTCTTTCCGAACTAAATGTTCCGGTTTATGCGACTTCGGCCACGTTGCAGGCTATAAGGAACCCT GAAAATCTTTCCATAGTGCGCAAAGTATTTATCGGACAACCTATTTCAAATGATACGGAGAATATGAAATCTCTGGAAAC TACGGTCGATACCCAGGACGTTTCTTCACTACAGGTAATCCAATCGCCGGGACATTGCGACGGTCACGCTTCCTTCTATG ATTCTAAACATTGTATTTTGTTTGCCGGGGATTCTTTTATGCATACCGTATTTACGTCTCCTAACCGCGATGTGTCCGGC GCCGACTGGATTAGAACATTACAAAATTATTGTAATCTGAATATACGCACTATGATTGGCGCTCACGGTTACGTTTATAC TTCGGATGAAACGATTCTAAGGAGTCGTTTTGTAGTTCGTCGTAAGGATCCTAAACAAATGATCCTGGATAAACTTCGTT TTATGGAATGGGCTCGTGATGTAGTGATGGAAGGCGAGAGGCGCGGGTTACCCTATTCCGTAATCGAAGCTTGTTTGTTT CCGTGGCAAAGTTGGTGGTCATGGTATACTTGGTTTACAGACGAATCGGGACGTTTGTTTAGTGCGGGAGAATTTTCTAG GACTCATTTTTTACGGAGTTTTTCGTCCTTTCCCGAGAACGTACCTTTTCGATTTCCTATGTTTGCCAATTTGATAAATC GGCTTAAAAAAACTTTAACAAGAAGAATTTTCTGA
Upstream 100 bases:
>100_bases CCTACGGTTCCGCATCACAATTGGCCGAAGTTGGCAAAACTACTCGATCCTTATTTCGAAAGAAAAGAAATTAAATCGAT TCGATTTTTATTTTAAACCG
Downstream 100 bases:
>100_bases AAATTCTCGGTTTTTATGTATTAGAAAATCTGCATTTGTGTTCGAATCTAAATAATTCGGGAGTAAGGTTTTTCAAAATA AAAATAATGCGTTTGATTCT
Product: Zn-dependent hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 384; Mature: 384
Protein sequence:
>384_residues MKSFPPVSSLFPKNNGKTIIYFWIRYWTLFFIFLPWILVRQIGISFSNLLAALWTWNKEIILLSDTLRLIYMNNVSSLFL SVIFGERFTAIHYRDILFDPGPIFSWKKIKKYVVRRSSDIHTLVLTHAHEEHVGNVSTVLSELNVPVYATSATLQAIRNP ENLSIVRKVFIGQPISNDTENMKSLETTVDTQDVSSLQVIQSPGHCDGHASFYDSKHCILFAGDSFMHTVFTSPNRDVSG ADWIRTLQNYCNLNIRTMIGAHGYVYTSDETILRSRFVVRRKDPKQMILDKLRFMEWARDVVMEGERRGLPYSVIEACLF PWQSWWSWYTWFTDESGRLFSAGEFSRTHFLRSFSSFPENVPFRFPMFANLINRLKKTLTRRIF
Sequences:
>Translated_384_residues MKSFPPVSSLFPKNNGKTIIYFWIRYWTLFFIFLPWILVRQIGISFSNLLAALWTWNKEIILLSDTLRLIYMNNVSSLFL SVIFGERFTAIHYRDILFDPGPIFSWKKIKKYVVRRSSDIHTLVLTHAHEEHVGNVSTVLSELNVPVYATSATLQAIRNP ENLSIVRKVFIGQPISNDTENMKSLETTVDTQDVSSLQVIQSPGHCDGHASFYDSKHCILFAGDSFMHTVFTSPNRDVSG ADWIRTLQNYCNLNIRTMIGAHGYVYTSDETILRSRFVVRRKDPKQMILDKLRFMEWARDVVMEGERRGLPYSVIEACLF PWQSWWSWYTWFTDESGRLFSAGEFSRTHFLRSFSSFPENVPFRFPMFANLINRLKKTLTRRIF >Mature_384_residues MKSFPPVSSLFPKNNGKTIIYFWIRYWTLFFIFLPWILVRQIGISFSNLLAALWTWNKEIILLSDTLRLIYMNNVSSLFL SVIFGERFTAIHYRDILFDPGPIFSWKKIKKYVVRRSSDIHTLVLTHAHEEHVGNVSTVLSELNVPVYATSATLQAIRNP ENLSIVRKVFIGQPISNDTENMKSLETTVDTQDVSSLQVIQSPGHCDGHASFYDSKHCILFAGDSFMHTVFTSPNRDVSG ADWIRTLQNYCNLNIRTMIGAHGYVYTSDETILRSRFVVRRKDPKQMILDKLRFMEWARDVVMEGERRGLPYSVIEACLF PWQSWWSWYTWFTDESGRLFSAGEFSRTHFLRSFSSFPENVPFRFPMFANLINRLKKTLTRRIF
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44838; Mature: 44838
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSFPPVSSLFPKNNGKTIIYFWIRYWTLFFIFLPWILVRQIGISFSNLLAALWTWNKEI CCCCCCCHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCE ILLSDTLRLIYMNNVSSLFLSVIFGERFTAIHYRDILFDPGPIFSWKKIKKYVVRRSSDI EEEECCEEEEEECCHHHHHHHHHHCCCCEEEEEHHHEECCCCCCCHHHHHHHHHHCCCCC HTLVLTHAHEEHVGNVSTVLSELNVPVYATSATLQAIRNPENLSIVRKVFIGQPISNDTE EEEEEEECCHHHCCHHHHHHHHCCCCEEECHHHHHHHCCCCHHHHHHHHHHCCCCCCCHH NMKSLETTVDTQDVSSLQVIQSPGHCDGHASFYDSKHCILFAGDSFMHTVFTSPNRDVSG HHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCH ADWIRTLQNYCNLNIRTMIGAHGYVYTSDETILRSRFVVRRKDPKQMILDKLRFMEWARD HHHHHHHHHHHCCCEEEEECCCCEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH VVMEGERRGLPYSVIEACLFPWQSWWSWYTWFTDESGRLFSAGEFSRTHFLRSFSSFPEN HHHCCCCCCCCHHHHHHHHCCHHHHHCEEEEEECCCCCEEECCCHHHHHHHHHHHCCCCC VPFRFPMFANLINRLKKTLTRRIF CCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKSFPPVSSLFPKNNGKTIIYFWIRYWTLFFIFLPWILVRQIGISFSNLLAALWTWNKEI CCCCCCCHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCE ILLSDTLRLIYMNNVSSLFLSVIFGERFTAIHYRDILFDPGPIFSWKKIKKYVVRRSSDI EEEECCEEEEEECCHHHHHHHHHHCCCCEEEEEHHHEECCCCCCCHHHHHHHHHHCCCCC HTLVLTHAHEEHVGNVSTVLSELNVPVYATSATLQAIRNPENLSIVRKVFIGQPISNDTE EEEEEEECCHHHCCHHHHHHHHCCCCEEECHHHHHHHCCCCHHHHHHHHHHCCCCCCCHH NMKSLETTVDTQDVSSLQVIQSPGHCDGHASFYDSKHCILFAGDSFMHTVFTSPNRDVSG HHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCH ADWIRTLQNYCNLNIRTMIGAHGYVYTSDETILRSRFVVRRKDPKQMILDKLRFMEWARD HHHHHHHHHHHCCCEEEEECCCCEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH VVMEGERRGLPYSVIEACLFPWQSWWSWYTWFTDESGRLFSAGEFSRTHFLRSFSSFPEN HHHCCCCCCCCHHHHHHHHCCHHHHHCEEEEEECCCCCEEECCCHHHHHHHHHHHCCCCC VPFRFPMFANLINRLKKTLTRRIF CCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA