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The map label for this gene is 116327150

Identifier: 116327150

GI number: 116327150

Start: 382854

End: 383663

Strand: Direct

Name: 116327150

Synonym: LBL_0326

Alternate gene names: NA

Gene position: 382854-383663 (Clockwise)

Preceding gene: 116327149

Following gene: 116327151

Centisome position: 10.59

GC content: 36.91

Gene sequence:

>810_bases
ATGATACGTCGCCCTACCGATTTACCGAAACTGAACGAATTAAGCTCGACTTTACTGAATGTAAAGTTTTATAAAATCGT
TCGGTCTCTTTTGACTCCTTTTGTCTGTTGTGGCGTTTATTTCTATTGTGCAGTACAGGATCTTTGGTTTTTCTCTGTTT
GTATTCTTATATATTTAAGTTTCATTACCTACGCTTCCGTCTCCCACGATTTAGTTCATCGTACGCTAAAACTTCCGAAA
TTTTGGAATCATTTTTTTTTGACCTTAATAGAACTCTTAGCGTTACGTAGTGGGCATGCCTATCAAAGGGCGCATTTACA
TCACCATCGAACTTTTCCAACAAATAAGGACATAGAGGGGAACGCATCTAAATTGTCGTTTTTAAGCGTTTTGTTTTGTG
GAATTACGTTTCAAGTCAAAATTTGGTTATGGGCGCTCAAAGCGGGCGGGCGTAAAAGGACACTTGTTCTGATGGAAGGT
TTATTATGTTTTTCAATTATTCTAAGCGCTTTACTTCTTTATAATGTGTTTCCTATATTTTTCATTTATGTAAGTTTGAT
GATCGCCGGTAGTTGGGTAATCCCTTTTTTTACTTCGTACATTCCTCACGATCCTTTTCAAGAAGATCTTTTAAAACAAA
CTCGATTGTTTCGGGGAAAAATCGCTTCCTTTATCGCTATGGAACATCTCTATCACCTGGAACATCACCTTTACCCTACG
GTTCCGCATCACAATTGGCCGAAGTTGGCAAAACTACTCGATCCTTATTTCGAAAGAAAAGAAATTAAATCGATTCGATT
TTTATTTTAA

Upstream 100 bases:

>100_bases
AAGTTATAGTTTTTTATTGTTCAGATTTCCTTACATTGAATTCACCTTAAGTACGATTTTTTTGATTGAAGTAATTTCAT
AGAATTGAGCCAGTATAAAA

Downstream 100 bases:

>100_bases
ACCGATGAAATCGTTTCCGCCCGTTTCATCGTTATTCCCGAAAAATAACGGAAAAACAATCATTTACTTTTGGATACGTT
ACTGGACGTTATTTTTTATT

Product: Fatty acid desaturase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MIRRPTDLPKLNELSSTLLNVKFYKIVRSLLTPFVCCGVYFYCAVQDLWFFSVCILIYLSFITYASVSHDLVHRTLKLPK
FWNHFFLTLIELLALRSGHAYQRAHLHHHRTFPTNKDIEGNASKLSFLSVLFCGITFQVKIWLWALKAGGRKRTLVLMEG
LLCFSIILSALLLYNVFPIFFIYVSLMIAGSWVIPFFTSYIPHDPFQEDLLKQTRLFRGKIASFIAMEHLYHLEHHLYPT
VPHHNWPKLAKLLDPYFERKEIKSIRFLF

Sequences:

>Translated_269_residues
MIRRPTDLPKLNELSSTLLNVKFYKIVRSLLTPFVCCGVYFYCAVQDLWFFSVCILIYLSFITYASVSHDLVHRTLKLPK
FWNHFFLTLIELLALRSGHAYQRAHLHHHRTFPTNKDIEGNASKLSFLSVLFCGITFQVKIWLWALKAGGRKRTLVLMEG
LLCFSIILSALLLYNVFPIFFIYVSLMIAGSWVIPFFTSYIPHDPFQEDLLKQTRLFRGKIASFIAMEHLYHLEHHLYPT
VPHHNWPKLAKLLDPYFERKEIKSIRFLF
>Mature_269_residues
MIRRPTDLPKLNELSSTLLNVKFYKIVRSLLTPFVCCGVYFYCAVQDLWFFSVCILIYLSFITYASVSHDLVHRTLKLPK
FWNHFFLTLIELLALRSGHAYQRAHLHHHRTFPTNKDIEGNASKLSFLSVLFCGITFQVKIWLWALKAGGRKRTLVLMEG
LLCFSIILSALLLYNVFPIFFIYVSLMIAGSWVIPFFTSYIPHDPFQEDLLKQTRLFRGKIASFIAMEHLYHLEHHLYPT
VPHHNWPKLAKLLDPYFERKEIKSIRFLF

Specific function: Unknown

COG id: COG3239

COG function: function code I; Fatty acid desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31660; Mature: 31660

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure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CCCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA