Click here to switch to the map view.

The map label for this gene is ctaA [H]

Identifier: 116327098

GI number: 116327098

Start: 324043

End: 324996

Strand: Reverse

Name: ctaA [H]

Synonym: LBL_0273

Alternate gene names: 116327098

Gene position: 324996-324043 (Counterclockwise)

Preceding gene: 116327108

Following gene: 116327097

Centisome position: 8.99

GC content: 37.53

Gene sequence:

>954_bases
ATGAACTCTAACTCGGATATTTCTTCAAAATTTCGTTTGTTTTACAAAATCTCTCTATTCCTGAGTGTGCTTATCTTTTT
CAATTTACTCTATGGGCCTTTAGTGAGGGCTACCGGATCCGGACTTGCCTGCCCGGATTGGCCGTTCTGTTTCGGAAAAA
TTTTTCCGACCTTCGATTTTCAAATTTTTATGGAAGTCTCACATCGTTATTATTCCGGTTTTTTAGGATTAATTCTTTTA
GGTCTAACAATTTGGACGTTTACGGACCAAATTCTAAGAAAAGAATTCGGTATTTATCTAGGGCTTGCGATTTTGCTTTT
GATTTCGCAAATTAATTTAGGAAGACTAACCGTTACCTTAAAACTTGATCCGACGTCTGTAAATCTTCACCTGCTGAACG
CAATCGCTTTCTTTTTAGTCATTCTTACGGTTTCCATCGATTCTAGAGAGAAAGTTTTGTATCAAAAAAAGATTTTTATC
AAATCGGATTGTCTATTCAGAAAAGATAATATTCTTTATTACATTCTTTTGATCGGAATCCTAGTTCAGATCGTTTTAGG
CGGGCGTGTTAGTTCTCATTATGCGGGATTAGCTTGTCCTGATTTTCCAACTTGTTGGGGACAATGGATCCCGGACAATC
CGTTAGAAATCGTCAAAATTCAAATCATTCACAGATTCGGCGCTTACATGGTCGCATTACTTCTTACATTCACGTTGAGT
TTTGCGATTTGGAAGAACTTTCCTACAACCTCGAAAAGATTACTTCAAATTTCGATGTATCTACTGGTCGCTCAAATTAT
TTTAGGGATTCTGAATGTATTTTTCGGGCTCCCAAAACTTGTGACCGCACTTCATACAGGTTTTGCCGTTCTTTTACTCA
TGTTTTCTTATCTTTCCCTGATTTCCAGAGCCATTGTACTGACTTCGGAAAACGAACGGAGGCCTGAAAAATAA

Upstream 100 bases:

>100_bases
GGGGCCCACTGTCATAATTTTACAACAACTTTCATTGCCCTTAAAAGGTGATTTTCGAGTATGGTATTTCAGAACCTCTT
CTTGAAGGTTTCAGGAAAGA

Downstream 100 bases:

>100_bases
CTTCAGGATACTATAATGGCAAGTTCCACTTTCTTTTCCGATTGGAATCAATTGATCAAACCGCGGGTAACGTCCCTGGT
ACTAGCTACCATCATTCCAG

Product: cytochrome oxidase assembly protein

Products: NA

Alternate protein names: HAS; Cytochrome aa3-controlling protein [H]

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MNSNSDISSKFRLFYKISLFLSVLIFFNLLYGPLVRATGSGLACPDWPFCFGKIFPTFDFQIFMEVSHRYYSGFLGLILL
GLTIWTFTDQILRKEFGIYLGLAILLLISQINLGRLTVTLKLDPTSVNLHLLNAIAFFLVILTVSIDSREKVLYQKKIFI
KSDCLFRKDNILYYILLIGILVQIVLGGRVSSHYAGLACPDFPTCWGQWIPDNPLEIVKIQIIHRFGAYMVALLLTFTLS
FAIWKNFPTTSKRLLQISMYLLVAQIILGILNVFFGLPKLVTALHTGFAVLLLMFSYLSLISRAIVLTSENERRPEK

Sequences:

>Translated_317_residues
MNSNSDISSKFRLFYKISLFLSVLIFFNLLYGPLVRATGSGLACPDWPFCFGKIFPTFDFQIFMEVSHRYYSGFLGLILL
GLTIWTFTDQILRKEFGIYLGLAILLLISQINLGRLTVTLKLDPTSVNLHLLNAIAFFLVILTVSIDSREKVLYQKKIFI
KSDCLFRKDNILYYILLIGILVQIVLGGRVSSHYAGLACPDFPTCWGQWIPDNPLEIVKIQIIHRFGAYMVALLLTFTLS
FAIWKNFPTTSKRLLQISMYLLVAQIILGILNVFFGLPKLVTALHTGFAVLLLMFSYLSLISRAIVLTSENERRPEK
>Mature_317_residues
MNSNSDISSKFRLFYKISLFLSVLIFFNLLYGPLVRATGSGLACPDWPFCFGKIFPTFDFQIFMEVSHRYYSGFLGLILL
GLTIWTFTDQILRKEFGIYLGLAILLLISQINLGRLTVTLKLDPTSVNLHLLNAIAFFLVILTVSIDSREKVLYQKKIFI
KSDCLFRKDNILYYILLIGILVQIVLGGRVSSHYAGLACPDFPTCWGQWIPDNPLEIVKIQIIHRFGAYMVALLLTFTLS
FAIWKNFPTTSKRLLQISMYLLVAQIILGILNVFFGLPKLVTALHTGFAVLLLMFSYLSLISRAIVLTSENERRPEK

Specific function: Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group [H]

COG id: COG1612

COG function: function code O; Uncharacterized protein required for cytochrome oxidase assembly

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the COX15/CtaA family. Type 1 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003780 [H]

Pfam domain/function: PF02628 COX15-CtaA [H]

EC number: NA

Molecular weight: Translated: 36090; Mature: 36090

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSNSDISSKFRLFYKISLFLSVLIFFNLLYGPLVRATGSGLACPDWPFCFGKIFPTFDF
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCHHH
QIFMEVSHRYYSGFLGLILLGLTIWTFTDQILRKEFGIYLGLAILLLISQINLGRLTVTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
KLDPTSVNLHLLNAIAFFLVILTVSIDSREKVLYQKKIFIKSDCLFRKDNILYYILLIGI
EECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEECCCCEECCCHHHHHHHHHH
LVQIVLGGRVSSHYAGLACPDFPTCWGQWIPDNPLEIVKIQIIHRFGAYMVALLLTFTLS
HHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FAIWKNFPTTSKRLLQISMYLLVAQIILGILNVFFGLPKLVTALHTGFAVLLLMFSYLSL
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
ISRAIVLTSENERRPEK
HHHHHHEECCCCCCCCC
>Mature Secondary Structure
MNSNSDISSKFRLFYKISLFLSVLIFFNLLYGPLVRATGSGLACPDWPFCFGKIFPTFDF
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCHHH
QIFMEVSHRYYSGFLGLILLGLTIWTFTDQILRKEFGIYLGLAILLLISQINLGRLTVTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
KLDPTSVNLHLLNAIAFFLVILTVSIDSREKVLYQKKIFIKSDCLFRKDNILYYILLIGI
EECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEECCCCEECCCHHHHHHHHHH
LVQIVLGGRVSSHYAGLACPDFPTCWGQWIPDNPLEIVKIQIIHRFGAYMVALLLTFTLS
HHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FAIWKNFPTTSKRLLQISMYLLVAQIILGILNVFFGLPKLVTALHTGFAVLLLMFSYLSL
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
ISRAIVLTSENERRPEK
HHHHHHEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA