Click here to switch to the map view.

The map label for this gene is 116327068

Identifier: 116327068

GI number: 116327068

Start: 289899

End: 291401

Strand: Direct

Name: 116327068

Synonym: LBL_0241

Alternate gene names: NA

Gene position: 289899-291401 (Clockwise)

Preceding gene: 116327067

Following gene: 116327076

Centisome position: 8.02

GC content: 40.79

Gene sequence:

>1503_bases
ATGAGTAACTTAAAATATGGAATTCTGTTTCACAGAACACTCCGATTCGAAATTTTCGATTTTAGATTGTACTCGTCTTC
TTTGTTTTTCTGTTTCTCCGCTCTTATGATTTTTCCTTTGAATGCAAGAGAAGTGGAATTGAAAGTGCAAGACGTAACTT
TATATGAATCTTCCGCAGGAGTTTTAAGAAGCGGTAAGATCAATTTGGAGCCGGGAATCAACGAACTTATGATTCGAAAC
TTACCGGTTGCACTCCAAGACGAATCCTTGGTTGCATCAGTGGAAACAGCTGGGGCTTCCGTAGTAGGTTCTAGTACTTG
GATTGAGACGGGAGTCGTAATTCACAACAAAGATGTTTTGGAGTTACAGAAGAAGATCCGCGTTTTGGAAAGGGAAATAG
AAGATTATGAAAGTAGGAATTCCAATCTCGGAAATTTGAGAAGGATTCTTGCGGATACAAGATCGAAACTAACCGAGATG
ATTTCCAAAAATCTGTTCTACAAAAAGAACGAGGTAGATGCCAAAAAGTGGTTTCAGACTCTTTCCGGAAATCGACAAGC
GATTCAGGTTGTGTTGAGTTCCGATCAGGAAGTCGGTCGTACCATCAAGGATCTTCGAAAAAAACTTTTCGAACTGCAAG
ACAAATTGAGTGTGATTCTTTCCTTATCTGAAAAATCCTCTAGAATTACGAAAATTCTCGTGAGTTTTACCGAAGCCGAA
AAAAAAGAAGTAAAACTAAATCTAACGTACCGGACGGGAGGAATTTCTTGGAAGCCTTTCTACTCGGTTCGTATGGACGG
AAGAGAAAAAATCGAGTTTGAATATCTTGCGGAGATCAATCAGGAGAGCGGGGAGGATTGGAATAATATTAATCTTTTAT
TATCTACTTCCAGCCCCGACATAAGCGGAAGGAGACCGCGTCTTTCCAGTCAAAGAGTATACGATCAAAAAAAGAAAACG
GATAAGGACGGGCTTGTCACTTTTCAAAGCCAAAGTATTACGGAAGAATCTAATATTGTATCGGAAATGGAATCTCCCGA
AGCCGGAACTGATCCCACGACCGGAAATAGCGAAGAATCGGGAAGCGGGTTTCTATTCCGTTACTCAAAGCCGATTACTC
TTTTTTCTCGGAAAGAGTCCAAAAAGTTGTCCTTGGTATCTTTCACGACGGACGCCACATTTACGGCTTTATATGTTCCC
GCTTTAAAACATTATCCGCTCATTAAAGGAAGTTTTAAAAATATTTCCGGGTTTCCCATTATTCCCGGAGAAACGGCTGT
GTTTCGTCAAGCGGGTATGGTGGGAAAGTCCGGCTTCGGTTATATCAGCCCTGGAGAAAAGGCGGAAATATCTTTCGGTT
CTGAAAACGAAGTGCGAGCGATTTACAGAAAGGAATCGAATCAAACCAAAGAGGGAATTCTTTCAGGGACGAAGGTTGTT
GAAAAGCTAATTCGAGTAGAGCTTGAAAATTTCGGAAAAGAATCCAGAACGATTTCCTTTTAA

Upstream 100 bases:

>100_bases
CTACCTCCCGGAGGAAAGAAAATTATAGAATTTGAATATTCTGTGAGCCATCCGGCCGAAAATCGACTAATCCGGACTCC
GGGCTCCGGAGGATACTGAG

Downstream 100 bases:

>100_bases
GAATCGATTCCGGTTTCCGGAGTAGAAAACGTAAAGGTTTCCATCGATTCTGTTACGACTCCAGGTTATGCGGAAGTGAG
AAAAGATTCCGGAATTCTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 500; Mature: 499

Protein sequence:

>500_residues
MSNLKYGILFHRTLRFEIFDFRLYSSSLFFCFSALMIFPLNAREVELKVQDVTLYESSAGVLRSGKINLEPGINELMIRN
LPVALQDESLVASVETAGASVVGSSTWIETGVVIHNKDVLELQKKIRVLEREIEDYESRNSNLGNLRRILADTRSKLTEM
ISKNLFYKKNEVDAKKWFQTLSGNRQAIQVVLSSDQEVGRTIKDLRKKLFELQDKLSVILSLSEKSSRITKILVSFTEAE
KKEVKLNLTYRTGGISWKPFYSVRMDGREKIEFEYLAEINQESGEDWNNINLLLSTSSPDISGRRPRLSSQRVYDQKKKT
DKDGLVTFQSQSITEESNIVSEMESPEAGTDPTTGNSEESGSGFLFRYSKPITLFSRKESKKLSLVSFTTDATFTALYVP
ALKHYPLIKGSFKNISGFPIIPGETAVFRQAGMVGKSGFGYISPGEKAEISFGSENEVRAIYRKESNQTKEGILSGTKVV
EKLIRVELENFGKESRTISF

Sequences:

>Translated_500_residues
MSNLKYGILFHRTLRFEIFDFRLYSSSLFFCFSALMIFPLNAREVELKVQDVTLYESSAGVLRSGKINLEPGINELMIRN
LPVALQDESLVASVETAGASVVGSSTWIETGVVIHNKDVLELQKKIRVLEREIEDYESRNSNLGNLRRILADTRSKLTEM
ISKNLFYKKNEVDAKKWFQTLSGNRQAIQVVLSSDQEVGRTIKDLRKKLFELQDKLSVILSLSEKSSRITKILVSFTEAE
KKEVKLNLTYRTGGISWKPFYSVRMDGREKIEFEYLAEINQESGEDWNNINLLLSTSSPDISGRRPRLSSQRVYDQKKKT
DKDGLVTFQSQSITEESNIVSEMESPEAGTDPTTGNSEESGSGFLFRYSKPITLFSRKESKKLSLVSFTTDATFTALYVP
ALKHYPLIKGSFKNISGFPIIPGETAVFRQAGMVGKSGFGYISPGEKAEISFGSENEVRAIYRKESNQTKEGILSGTKVV
EKLIRVELENFGKESRTISF
>Mature_499_residues
SNLKYGILFHRTLRFEIFDFRLYSSSLFFCFSALMIFPLNAREVELKVQDVTLYESSAGVLRSGKINLEPGINELMIRNL
PVALQDESLVASVETAGASVVGSSTWIETGVVIHNKDVLELQKKIRVLEREIEDYESRNSNLGNLRRILADTRSKLTEMI
SKNLFYKKNEVDAKKWFQTLSGNRQAIQVVLSSDQEVGRTIKDLRKKLFELQDKLSVILSLSEKSSRITKILVSFTEAEK
KEVKLNLTYRTGGISWKPFYSVRMDGREKIEFEYLAEINQESGEDWNNINLLLSTSSPDISGRRPRLSSQRVYDQKKKTD
KDGLVTFQSQSITEESNIVSEMESPEAGTDPTTGNSEESGSGFLFRYSKPITLFSRKESKKLSLVSFTTDATFTALYVPA
LKHYPLIKGSFKNISGFPIIPGETAVFRQAGMVGKSGFGYISPGEKAEISFGSENEVRAIYRKESNQTKEGILSGTKVVE
KLIRVELENFGKESRTISF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI17566994, Length=465, Percent_Identity=22.3655913978495, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17566992, Length=257, Percent_Identity=23.3463035019455, Blast_Score=85, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17566996, Length=463, Percent_Identity=22.2462203023758, Blast_Score=83, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56462; Mature: 56331

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNLKYGILFHRTLRFEIFDFRLYSSSLFFCFSALMIFPLNAREVELKVQDVTLYESSAG
CCCCEEEEEEEEEEEEEEEEEEEHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEECCCC
VLRSGKINLEPGINELMIRNLPVALQDESLVASVETAGASVVGSSTWIETGVVIHNKDVL
CEECCEEEECCCHHHHHHHCCCCEEECCHHEEEHHHCCCEEECCCCEEECCEEEECCHHH
ELQKKIRVLEREIEDYESRNSNLGNLRRILADTRSKLTEMISKNLFYKKNEVDAKKWFQT
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
LSGNRQAIQVVLSSDQEVGRTIKDLRKKLFELQDKLSVILSLSEKSSRITKILVSFTEAE
HCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCC
KKEVKLNLTYRTGGISWKPFYSVRMDGREKIEFEYLAEINQESGEDWNNINLLLSTSSPD
CEEEEEEEEEEECCCCCCEEEEEEECCCHHCCHHHHHHHHHCCCCCCCCEEEEEECCCCC
ISGRRPRLSSQRVYDQKKKTDKDGLVTFQSQSITEESNIVSEMESPEAGTDPTTGNSEES
CCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
GSGFLFRYSKPITLFSRKESKKLSLVSFTTDATFTALYVPALKHYPLIKGSFKNISGFPI
CCEEEEEECCCEEEEECCCCCEEEEEEEECCCCEEHHHHHHHHCCCCCCCCCCCCCCCCC
IPGETAVFRQAGMVGKSGFGYISPGEKAEISFGSENEVRAIYRKESNQTKEGILSGTKVV
CCCCHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCHHEEEECCCCCHHHHHHHHHHHH
EKLIRVELENFGKESRTISF
HHHHHHHHHHCCCCCCEECC
>Mature Secondary Structure 
SNLKYGILFHRTLRFEIFDFRLYSSSLFFCFSALMIFPLNAREVELKVQDVTLYESSAG
CCCEEEEEEEEEEEEEEEEEEEHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEECCCC
VLRSGKINLEPGINELMIRNLPVALQDESLVASVETAGASVVGSSTWIETGVVIHNKDVL
CEECCEEEECCCHHHHHHHCCCCEEECCHHEEEHHHCCCEEECCCCEEECCEEEECCHHH
ELQKKIRVLEREIEDYESRNSNLGNLRRILADTRSKLTEMISKNLFYKKNEVDAKKWFQT
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
LSGNRQAIQVVLSSDQEVGRTIKDLRKKLFELQDKLSVILSLSEKSSRITKILVSFTEAE
HCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCC
KKEVKLNLTYRTGGISWKPFYSVRMDGREKIEFEYLAEINQESGEDWNNINLLLSTSSPD
CEEEEEEEEEEECCCCCCEEEEEEECCCHHCCHHHHHHHHHCCCCCCCCEEEEEECCCCC
ISGRRPRLSSQRVYDQKKKTDKDGLVTFQSQSITEESNIVSEMESPEAGTDPTTGNSEES
CCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
GSGFLFRYSKPITLFSRKESKKLSLVSFTTDATFTALYVPALKHYPLIKGSFKNISGFPI
CCEEEEEECCCEEEEECCCCCEEEEEEEECCCCEEHHHHHHHHCCCCCCCCCCCCCCCCC
IPGETAVFRQAGMVGKSGFGYISPGEKAEISFGSENEVRAIYRKESNQTKEGILSGTKVV
CCCCHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCHHEEEECCCCCHHHHHHHHHHHH
EKLIRVELENFGKESRTISF
HHHHHHHHHHCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA