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The map label for this gene is yejB [H]

Identifier: 116326989

GI number: 116326989

Start: 187119

End: 188129

Strand: Reverse

Name: yejB [H]

Synonym: LBL_0158

Alternate gene names: 116326989

Gene position: 188129-187119 (Counterclockwise)

Preceding gene: 116326990

Following gene: 116326988

Centisome position: 5.2

GC content: 40.26

Gene sequence:

>1011_bases
ATGAAAAAATATTTCCTAAAACGATTTGTTCTGATTATCCCCACACTATTAGGAATGACATTCATCGTTTTTTTAATTTC
TCATTTTGCTCCGGGTGGTCCCCTTGAAACCGAGATTGCAAAGATTCGAGGTTATGCAAATTCCCAAGGTGGAAACGCGA
AAACGATTTCGGAAGAAGAAATCGATATCATCAAAAAAAGACTACACTTGGACAAGCCCGTAGGAATCGCATATCTTTAC
TGGCTTAAAGAAATTCTCGCCTTCAATTTGGGGGAATCTAGGCTCCACACACGACAAGTATCGGATCTGATCTTGGAAAA
ACTCCCAGTATCATTGACCTTCGGTCTCTCCGGATTTTTATTTTCTTATCTCATATGTATTCCGCTTGGAATTTCAAAAG
CGCTTCGAAACGGAGAACGTTTCGATATCGCATCCAGCGGAATTATCTTGATCACATATTCCATTCCCATATTCGCACTT
TCTGTTTTACTTCTTTATGTCTTCGCTTCGGGAGAATTATTGTCGATTTTCCCTTTAGGTCACGAAGTTTCGGATGATTA
CGAATCTTTTTCCCTTTCGGAAAAAATCGTGGATCGAATCGCGCACATGTTCCTTCCGGTAATCTGCTACGTTTCCGGTT
CGTTCGCCGTTCTTACATTACTTATGAAGAATTCTCTTTTGGACCAAATCTCAAAAGAGTATGTTCGCACCGCACTTTCC
AAAGGATTTAGTTTCAAAGAAGCGATTTTCAAACATGCCTTTCGAAATTCCTTGATCCCGATCGCAACCGGATTCGGAAG
TAATCTCAGCCTTATCTTTGCCGGATCTTTGGTGATTGAACTCGTATTTAATATAGACGGAATGGGACTTTTGAGTTTTC
AAGCAGTTACCGAAAGAGATACGGATTTGATGATGGGGCTTCTACTCGTGCAAAGTCTTCTTTCGCTAATCGGAAACATT
CTATCAGATTTCTGTTATGTATTGATCGATCCGAGGATTCAGTTCGAATGA

Upstream 100 bases:

>100_bases
TAAATCGATTCATTTCTCTTAACAATTAAAATACTTTTTCGAAAAAGGCTTTGTCATAAGATCTGATTCGTTGAAACTGT
TTTTCGGAACCGGAAACGTA

Downstream 100 bases:

>100_bases
TCTTAAGTCCGATATTTAAAAAAAGATTCCAAAAATTCAAAGAAAACAAAAGGGCATGGTATGCTCTAAACATATTAGTG
ATTTCTTATTCGACTTCCCT

Product: ABC transporter permease

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MKKYFLKRFVLIIPTLLGMTFIVFLISHFAPGGPLETEIAKIRGYANSQGGNAKTISEEEIDIIKKRLHLDKPVGIAYLY
WLKEILAFNLGESRLHTRQVSDLILEKLPVSLTFGLSGFLFSYLICIPLGISKALRNGERFDIASSGIILITYSIPIFAL
SVLLLYVFASGELLSIFPLGHEVSDDYESFSLSEKIVDRIAHMFLPVICYVSGSFAVLTLLMKNSLLDQISKEYVRTALS
KGFSFKEAIFKHAFRNSLIPIATGFGSNLSLIFAGSLVIELVFNIDGMGLLSFQAVTERDTDLMMGLLLVQSLLSLIGNI
LSDFCYVLIDPRIQFE

Sequences:

>Translated_336_residues
MKKYFLKRFVLIIPTLLGMTFIVFLISHFAPGGPLETEIAKIRGYANSQGGNAKTISEEEIDIIKKRLHLDKPVGIAYLY
WLKEILAFNLGESRLHTRQVSDLILEKLPVSLTFGLSGFLFSYLICIPLGISKALRNGERFDIASSGIILITYSIPIFAL
SVLLLYVFASGELLSIFPLGHEVSDDYESFSLSEKIVDRIAHMFLPVICYVSGSFAVLTLLMKNSLLDQISKEYVRTALS
KGFSFKEAIFKHAFRNSLIPIATGFGSNLSLIFAGSLVIELVFNIDGMGLLSFQAVTERDTDLMMGLLLVQSLLSLIGNI
LSDFCYVLIDPRIQFE
>Mature_336_residues
MKKYFLKRFVLIIPTLLGMTFIVFLISHFAPGGPLETEIAKIRGYANSQGGNAKTISEEEIDIIKKRLHLDKPVGIAYLY
WLKEILAFNLGESRLHTRQVSDLILEKLPVSLTFGLSGFLFSYLICIPLGISKALRNGERFDIASSGIILITYSIPIFAL
SVLLLYVFASGELLSIFPLGHEVSDDYESFSLSEKIVDRIAHMFLPVICYVSGSFAVLTLLMKNSLLDQISKEYVRTALS
KGFSFKEAIFKHAFRNSLIPIATGFGSNLSLIFAGSLVIELVFNIDGMGLLSFQAVTERDTDLMMGLLLVQSLLSLIGNI
LSDFCYVLIDPRIQFE

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4174

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788504, Length=362, Percent_Identity=40.0552486187845, Blast_Score=261, Evalue=4e-71,
Organism=Escherichia coli, GI1789965, Length=352, Percent_Identity=27.5568181818182, Blast_Score=159, Evalue=3e-40,
Organism=Escherichia coli, GI1787497, Length=336, Percent_Identity=25.8928571428571, Blast_Score=133, Evalue=2e-32,
Organism=Escherichia coli, GI1787053, Length=336, Percent_Identity=27.9761904761905, Blast_Score=131, Evalue=5e-32,
Organism=Escherichia coli, GI1789888, Length=334, Percent_Identity=26.0479041916168, Blast_Score=114, Evalue=1e-26,
Organism=Escherichia coli, GI1787550, Length=269, Percent_Identity=24.1635687732342, Blast_Score=95, Evalue=6e-21,
Organism=Escherichia coli, GI1787761, Length=330, Percent_Identity=26.0606060606061, Blast_Score=87, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 37432; Mature: 37432

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKYFLKRFVLIIPTLLGMTFIVFLISHFAPGGPLETEIAKIRGYANSQGGNAKTISEEE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHH
IDIIKKRLHLDKPVGIAYLYWLKEILAFNLGESRLHTRQVSDLILEKLPVSLTFGLSGFL
HHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHCHHHHH
FSYLICIPLGISKALRNGERFDIASSGIILITYSIPIFALSVLLLYVFASGELLSIFPLG
HHHHHHHHHHHHHHHCCCCCEEECCCCEEEEEECHHHHHHHHHHHHHHCCCCEEEEEECC
HEVSDDYESFSLSEKIVDRIAHMFLPVICYVSGSFAVLTLLMKNSLLDQISKEYVRTALS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KGFSFKEAIFKHAFRNSLIPIATGFGSNLSLIFAGSLVIELVFNIDGMGLLSFQAVTERD
CCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCC
TDLMMGLLLVQSLLSLIGNILSDFCYVLIDPRIQFE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKKYFLKRFVLIIPTLLGMTFIVFLISHFAPGGPLETEIAKIRGYANSQGGNAKTISEEE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHH
IDIIKKRLHLDKPVGIAYLYWLKEILAFNLGESRLHTRQVSDLILEKLPVSLTFGLSGFL
HHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHCHHHHH
FSYLICIPLGISKALRNGERFDIASSGIILITYSIPIFALSVLLLYVFASGELLSIFPLG
HHHHHHHHHHHHHHHCCCCCEEECCCCEEEEEECHHHHHHHHHHHHHHCCCCEEEEEECC
HEVSDDYESFSLSEKIVDRIAHMFLPVICYVSGSFAVLTLLMKNSLLDQISKEYVRTALS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KGFSFKEAIFKHAFRNSLIPIATGFGSNLSLIFAGSLVIELVFNIDGMGLLSFQAVTERD
CCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCC
TDLMMGLLLVQSLLSLIGNILSDFCYVLIDPRIQFE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]