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The map label for this gene is yejE [H]

Identifier: 116326988

GI number: 116326988

Start: 186079

End: 187122

Strand: Reverse

Name: yejE [H]

Synonym: LBL_0157

Alternate gene names: 116326988

Gene position: 187122-186079 (Counterclockwise)

Preceding gene: 116326989

Following gene: 116326987

Centisome position: 5.18

GC content: 40.04

Gene sequence:

>1044_bases
ATGATCTTAAGTCCGATATTTAAAAAAAGATTCCAAAAATTCAAAGAAAACAAAAGGGCATGGTATGCTCTAAACATATT
AGTGATTTCTTATTCGACTTCCCTGCTTGCTCCACTCATCGCCACCAATCAACCTCTAATCGTAAGTTACCGCGACAAAT
GGTATTTTCCTATTTTCTTCTTCTATCCGGAATCCACGTTCGGAAGCGAAAATCGAACCCCTCCTAACTACAAAAAACTT
TCCCGAAGAGACGATTTTGTATCAGGTTCCAATTGGATCCTTTTTGCTCCGATTCCTTACGGATATAACGAAGACAATCT
TGAAAGTTTGGAAGAAGGTGAAACTCCGCCTTCTTCACCGAATCGAAAACATTGGCTCGGAACGGACGATCGAGGTAGAG
ACGTTTTCACAAGAGTTTTTTACGCTTATAGAAACGCTCTGAGTTTCGGTCTTATATTAGTTTTTCTTGAATTAACAATG
GGAACTTTAATCGGAGGAATACAAGGTTATTTCGGTGGAAAAACGGATATTCTGATGCAGAGAATCATAGAAATTTTTTC
CGCGATTCCTTTTTTATATTTAATACTGATTGTTGGAGCATTTTTCGGTAGGGGATTTACCGTTCTTCTGATTACGTACG
GCGCATTGAGTTGGATCGGAATTTCGTATTATATGCGCGGAGAATTCTACAAACTCAAACAATTGACTTATGTCGATTCC
GCAAAAGCTTTAGGGGTCGGTTCATTTCGAATTATGCTTCGACATATTCTGCCCAATGCAATTACTCCTCTGATAACTTT
TTTACCGTTCACATTGATCGCATCTATTTCCATCTTAAGCGCGTTAGACTTCCTTGGTTACGGAATTCCCGCACCGAATC
CTTCCTGGGGAGAGATGATCGGGCAAGGAAGAGAACGGCTTAGCGCTTGGTGGTTGATAACATTCCCTTCTGCTGCGCTT
TTTTTAACGATTCTTTTTACCTCGTTCGTTGGAGAAGGTTTAAGAGACTCTTTTGATTCCAGAAAAAAAGCGGTGTACGA
ATGA

Upstream 100 bases:

>100_bases
TGATGATGGGGCTTCTACTCGTGCAAAGTCTTCTTTCGCTAATCGGAAACATTCTATCAGATTTCTGTTATGTATTGATC
GATCCGAGGATTCAGTTCGA

Downstream 100 bases:

>100_bases
CCACTCTTCCCTTACTTCAAATTAAGAATTTTTCACTCGACCTTCTTTCCGAAAATCGATGGCTTCCCGTTCTTCAAGAT
CTGAATTTTGAAGTAAGACA

Product: ABC transporter permease

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 347; Mature: 347

Protein sequence:

>347_residues
MILSPIFKKRFQKFKENKRAWYALNILVISYSTSLLAPLIATNQPLIVSYRDKWYFPIFFFYPESTFGSENRTPPNYKKL
SRRDDFVSGSNWILFAPIPYGYNEDNLESLEEGETPPSSPNRKHWLGTDDRGRDVFTRVFYAYRNALSFGLILVFLELTM
GTLIGGIQGYFGGKTDILMQRIIEIFSAIPFLYLILIVGAFFGRGFTVLLITYGALSWIGISYYMRGEFYKLKQLTYVDS
AKALGVGSFRIMLRHILPNAITPLITFLPFTLIASISILSALDFLGYGIPAPNPSWGEMIGQGRERLSAWWLITFPSAAL
FLTILFTSFVGEGLRDSFDSRKKAVYE

Sequences:

>Translated_347_residues
MILSPIFKKRFQKFKENKRAWYALNILVISYSTSLLAPLIATNQPLIVSYRDKWYFPIFFFYPESTFGSENRTPPNYKKL
SRRDDFVSGSNWILFAPIPYGYNEDNLESLEEGETPPSSPNRKHWLGTDDRGRDVFTRVFYAYRNALSFGLILVFLELTM
GTLIGGIQGYFGGKTDILMQRIIEIFSAIPFLYLILIVGAFFGRGFTVLLITYGALSWIGISYYMRGEFYKLKQLTYVDS
AKALGVGSFRIMLRHILPNAITPLITFLPFTLIASISILSALDFLGYGIPAPNPSWGEMIGQGRERLSAWWLITFPSAAL
FLTILFTSFVGEGLRDSFDSRKKAVYE
>Mature_347_residues
MILSPIFKKRFQKFKENKRAWYALNILVISYSTSLLAPLIATNQPLIVSYRDKWYFPIFFFYPESTFGSENRTPPNYKKL
SRRDDFVSGSNWILFAPIPYGYNEDNLESLEEGETPPSSPNRKHWLGTDDRGRDVFTRVFYAYRNALSFGLILVFLELTM
GTLIGGIQGYFGGKTDILMQRIIEIFSAIPFLYLILIVGAFFGRGFTVLLITYGALSWIGISYYMRGEFYKLKQLTYVDS
AKALGVGSFRIMLRHILPNAITPLITFLPFTLIASISILSALDFLGYGIPAPNPSWGEMIGQGRERLSAWWLITFPSAAL
FLTILFTSFVGEGLRDSFDSRKKAVYE

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4239

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788505, Length=344, Percent_Identity=39.5348837209302, Blast_Score=256, Evalue=1e-69,
Organism=Escherichia coli, GI1787054, Length=245, Percent_Identity=35.1020408163265, Blast_Score=153, Evalue=2e-38,
Organism=Escherichia coli, GI1787760, Length=245, Percent_Identity=33.0612244897959, Blast_Score=143, Evalue=2e-35,
Organism=Escherichia coli, GI1787498, Length=253, Percent_Identity=30.0395256916996, Blast_Score=134, Evalue=8e-33,
Organism=Escherichia coli, GI1789964, Length=258, Percent_Identity=35.2713178294574, Blast_Score=129, Evalue=3e-31,
Organism=Escherichia coli, GI1789889, Length=222, Percent_Identity=31.0810810810811, Blast_Score=111, Evalue=7e-26,
Organism=Escherichia coli, GI1787549, Length=218, Percent_Identity=27.5229357798165, Blast_Score=91, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 39585; Mature: 39585

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILSPIFKKRFQKFKENKRAWYALNILVISYSTSLLAPLIATNQPLIVSYRDKWYFPIFF
CCCCHHHHHHHHHHHHCCCEEEEEEEEEEEECHHHHHHHHHCCCCEEEEECCCEEEEEEE
FYPESTFGSENRTPPNYKKLSRRDDFVSGSNWILFAPIPYGYNEDNLESLEEGETPPSSP
EECCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEECCCCCCCCCCHHHHHCCCCCCCCC
NRKHWLGTDDRGRDVFTRVFYAYRNALSFGLILVFLELTMGTLIGGIQGYFGGKTDILMQ
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
RIIEIFSAIPFLYLILIVGAFFGRGFTVLLITYGALSWIGISYYMRGEFYKLKQLTYVDS
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC
AKALGVGSFRIMLRHILPNAITPLITFLPFTLIASISILSALDFLGYGIPAPNPSWGEMI
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
GQGRERLSAWWLITFPSAALFLTILFTSFVGEGLRDSFDSRKKAVYE
HHHHHHHHEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MILSPIFKKRFQKFKENKRAWYALNILVISYSTSLLAPLIATNQPLIVSYRDKWYFPIFF
CCCCHHHHHHHHHHHHCCCEEEEEEEEEEEECHHHHHHHHHCCCCEEEEECCCEEEEEEE
FYPESTFGSENRTPPNYKKLSRRDDFVSGSNWILFAPIPYGYNEDNLESLEEGETPPSSP
EECCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEECCCCCCCCCCHHHHHCCCCCCCCC
NRKHWLGTDDRGRDVFTRVFYAYRNALSFGLILVFLELTMGTLIGGIQGYFGGKTDILMQ
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
RIIEIFSAIPFLYLILIVGAFFGRGFTVLLITYGALSWIGISYYMRGEFYKLKQLTYVDS
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC
AKALGVGSFRIMLRHILPNAITPLITFLPFTLIASISILSALDFLGYGIPAPNPSWGEMI
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
GQGRERLSAWWLITFPSAALFLTILFTSFVGEGLRDSFDSRKKAVYE
HHHHHHHHEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]