| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116326908
Identifier: 116326908
GI number: 116326908
Start: 75053
End: 76627
Strand: Reverse
Name: 116326908
Synonym: LBL_0067
Alternate gene names: NA
Gene position: 76627-75053 (Counterclockwise)
Preceding gene: 116326909
Following gene: 116326901
Centisome position: 2.12
GC content: 38.16
Gene sequence:
>1575_bases GTGTTCAACAACCTTTCAAAAAACGCCTACTGCTTTTATTATCTTGCGGTAATTTTATCTCCATCTTTGATTTTTTCCCA AGAAGTTGAAGAGAAAACTAAATTCGATTTTCAGGGAAATTATAGGGTGCGTGGATTCAATCTTGCAAGAGATATATACA CGTCTCGTCAAACTTCTGCCACTCCTTACGATAAAGGCGCATTTAAAACCGAACAACAACAACGAAATCAGAATATAACC GAAACTGAAATTACGGAAAAATTGAAAGGTAATCCTAGCACCTTGTCTCCTCAAAAGGAAGACATTTCATATTTTGATAC TAGAATGACGGTAAACATGAATTTTAATACTTCGAAATATTTTGAAGCGCTTTGGGGCGTTCAAGTCGGTGATATTACTT TCGGCGGAAAAGGTTTCGGTCAAAACTCTACAACCGGTCCGGGGCAAGGTGGAGAAGCGAACTTCACTTCTCCGGTAAAC ATACAGACTACATTTTTATATTTGAATTTTAAACTTCCAGAGGACGCTTTCAGTTTGAGGGTAGGTCAGCAACTCTTTTT TTCCCCAAGAGGGAGAGTTATCTTTGCTTCGGGTACCGGAATTACGATTAACAAAGACTTTCGATTATGGAACACTACGA TTGAATCCGGTTGGTTTGTGGCGCGACAAAACGCTCAACTCGACTTGGATAAAAACGCTTACGCCGATAAGAATTATGTA GGAACGAATATTTATTTTTACAAAATCAAAACGAGTTTCTTTAACAATGTAAAACACGAACTTTATTCCTACTTTTTAGA TGATACGATTAAATCCATAGAAAAGACGACTAACGCAAAAGGAACTGTAATCGCTTTGGATAGCGAATTCGGCCAATTGT TTTGGCACGGCTTTATGAACGAGATCAATCTATCGAACTTCGGATTTGTGGTTCATGGGATTTATAATCACGGAACCGTT CATGTTTTGGAACCGTATCAAGACAATGCCGGAAATGTTTTATATAACCGATTTAGTAGGCACAATATATCCGGCGGAAT GTTGGATCTTCAGTTTTCCTATCGTTATAGCGAAAATTTTACCTTCAACTTAATAGGAGTTGGCACTACGGGGCGTCCTG GATTTGATAAAGATGGGACAAGGGCGAATCTTCGAGGCGGAGGTTATAAAACTTTGATGCCCGGTTACTCTATATCGAAT ATTGGACACGACTTTACGGGAGGTTACGCACTTTTTTCCGGAAAAGATTCGAGCGGTTTGTACGAATACGGAGTTAACGG AGATTTTGTCGTTTATGGTCCCTTGCTCCTAACGTTAGGATATTATCGATTGTATGGAACAAAGTCACCTTATATTGAAA ACAATCGTTACTTCAATTTTGATAATGGATACAAAACAAGCACTTTCTTCGGGCACGAAGTTAATATCAATTTAAGATGG AATGCATTTCGAGATATGCAAATTTTGATGAGATCCGGTTATTTTATAGCGGGGGATGGATTGAAGGCTTATTTAGATAC GACTTACGGAAAAATTCTTAGGGAATTTTTTGTAACTGCAGAACATAGATTCTAA
Upstream 100 bases:
>100_bases GGATAATTTAAATTTCTTCATCAAGGAATTGAAGAGGACCGGTCTTTTGGAAGAATTAAAAAACCGATACTTTAATCAAA ACAGCTGGGTAAAGTGATTC
Downstream 100 bases:
>100_bases AATTAAAGCTGAAGACGGGAACGAATGGCTCTTCCCAAAGTGTATTGGTCTGCAAGTTCAATCGAGCCTCCGACCGTAAT CCCGTAAGCAATTCGAGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 524; Mature: 524
Protein sequence:
>524_residues MFNNLSKNAYCFYYLAVILSPSLIFSQEVEEKTKFDFQGNYRVRGFNLARDIYTSRQTSATPYDKGAFKTEQQQRNQNIT ETEITEKLKGNPSTLSPQKEDISYFDTRMTVNMNFNTSKYFEALWGVQVGDITFGGKGFGQNSTTGPGQGGEANFTSPVN IQTTFLYLNFKLPEDAFSLRVGQQLFFSPRGRVIFASGTGITINKDFRLWNTTIESGWFVARQNAQLDLDKNAYADKNYV GTNIYFYKIKTSFFNNVKHELYSYFLDDTIKSIEKTTNAKGTVIALDSEFGQLFWHGFMNEINLSNFGFVVHGIYNHGTV HVLEPYQDNAGNVLYNRFSRHNISGGMLDLQFSYRYSENFTFNLIGVGTTGRPGFDKDGTRANLRGGGYKTLMPGYSISN IGHDFTGGYALFSGKDSSGLYEYGVNGDFVVYGPLLLTLGYYRLYGTKSPYIENNRYFNFDNGYKTSTFFGHEVNINLRW NAFRDMQILMRSGYFIAGDGLKAYLDTTYGKILREFFVTAEHRF
Sequences:
>Translated_524_residues MFNNLSKNAYCFYYLAVILSPSLIFSQEVEEKTKFDFQGNYRVRGFNLARDIYTSRQTSATPYDKGAFKTEQQQRNQNIT ETEITEKLKGNPSTLSPQKEDISYFDTRMTVNMNFNTSKYFEALWGVQVGDITFGGKGFGQNSTTGPGQGGEANFTSPVN IQTTFLYLNFKLPEDAFSLRVGQQLFFSPRGRVIFASGTGITINKDFRLWNTTIESGWFVARQNAQLDLDKNAYADKNYV GTNIYFYKIKTSFFNNVKHELYSYFLDDTIKSIEKTTNAKGTVIALDSEFGQLFWHGFMNEINLSNFGFVVHGIYNHGTV HVLEPYQDNAGNVLYNRFSRHNISGGMLDLQFSYRYSENFTFNLIGVGTTGRPGFDKDGTRANLRGGGYKTLMPGYSISN IGHDFTGGYALFSGKDSSGLYEYGVNGDFVVYGPLLLTLGYYRLYGTKSPYIENNRYFNFDNGYKTSTFFGHEVNINLRW NAFRDMQILMRSGYFIAGDGLKAYLDTTYGKILREFFVTAEHRF >Mature_524_residues MFNNLSKNAYCFYYLAVILSPSLIFSQEVEEKTKFDFQGNYRVRGFNLARDIYTSRQTSATPYDKGAFKTEQQQRNQNIT ETEITEKLKGNPSTLSPQKEDISYFDTRMTVNMNFNTSKYFEALWGVQVGDITFGGKGFGQNSTTGPGQGGEANFTSPVN IQTTFLYLNFKLPEDAFSLRVGQQLFFSPRGRVIFASGTGITINKDFRLWNTTIESGWFVARQNAQLDLDKNAYADKNYV GTNIYFYKIKTSFFNNVKHELYSYFLDDTIKSIEKTTNAKGTVIALDSEFGQLFWHGFMNEINLSNFGFVVHGIYNHGTV HVLEPYQDNAGNVLYNRFSRHNISGGMLDLQFSYRYSENFTFNLIGVGTTGRPGFDKDGTRANLRGGGYKTLMPGYSISN IGHDFTGGYALFSGKDSSGLYEYGVNGDFVVYGPLLLTLGYYRLYGTKSPYIENNRYFNFDNGYKTSTFFGHEVNINLRW NAFRDMQILMRSGYFIAGDGLKAYLDTTYGKILREFFVTAEHRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59705; Mature: 59705
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFNNLSKNAYCFYYLAVILSPSLIFSQEVEEKTKFDFQGNYRVRGFNLARDIYTSRQTSA CCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHCCCCCCC TPYDKGAFKTEQQQRNQNITETEITEKLKGNPSTLSPQKEDISYFDTRMTVNMNFNTSKY CCCCCCCCCCHHHHHCCCCCHHHHHHHHCCCCCCCCCCHHCCEEEEEEEEEEECCCCHHH FEALWGVQVGDITFGGKGFGQNSTTGPGQGGEANFTSPVNIQTTFLYLNFKLPEDAFSLR HHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCHHHHHH VGQQLFFSPRGRVIFASGTGITINKDFRLWNTTIESGWFVARQNAQLDLDKNAYADKNYV HCHHEEECCCCCEEEECCCCEEEECCEEEEEEEECCCEEEEECCCEEEECCCCCCCCCEE GTNIYFYKIKTSFFNNVKHELYSYFLDDTIKSIEKTTNAKGTVIALDSEFGQLFWHGFMN CCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHH EINLSNFGFVVHGIYNHGTVHVLEPYQDNAGNVLYNRFSRHNISGGMLDLQFSYRYSENF HCCCCCCCEEEEEEECCCEEEEECCCCCCCCCEEEHHHHCCCCCCCEEEEEEEEEECCCC TFNLIGVGTTGRPGFDKDGTRANLRGGGYKTLMPGYSISNIGHDFTGGYALFSGKDSSGL EEEEEEECCCCCCCCCCCCCEEEECCCCEEEECCCCCHHCCCCCCCCCEEEEECCCCCCC YEYGVNGDFVVYGPLLLTLGYYRLYGTKSPYIENNRYFNFDNGYKTSTFFGHEVNINLRW EEECCCCCEEEECHHHHHHHHHEEECCCCCCCCCCCEEECCCCEEECEEECEEEEEEEEE NAFRDMQILMRSGYFIAGDGLKAYLDTTYGKILREFFVTAEHRF CCHHHHHHHHHCCCEEECCCCEEEHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MFNNLSKNAYCFYYLAVILSPSLIFSQEVEEKTKFDFQGNYRVRGFNLARDIYTSRQTSA CCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHCCCCCCC TPYDKGAFKTEQQQRNQNITETEITEKLKGNPSTLSPQKEDISYFDTRMTVNMNFNTSKY CCCCCCCCCCHHHHHCCCCCHHHHHHHHCCCCCCCCCCHHCCEEEEEEEEEEECCCCHHH FEALWGVQVGDITFGGKGFGQNSTTGPGQGGEANFTSPVNIQTTFLYLNFKLPEDAFSLR HHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCHHHHHH VGQQLFFSPRGRVIFASGTGITINKDFRLWNTTIESGWFVARQNAQLDLDKNAYADKNYV HCHHEEECCCCCEEEECCCCEEEECCEEEEEEEECCCEEEEECCCEEEECCCCCCCCCEE GTNIYFYKIKTSFFNNVKHELYSYFLDDTIKSIEKTTNAKGTVIALDSEFGQLFWHGFMN CCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHH EINLSNFGFVVHGIYNHGTVHVLEPYQDNAGNVLYNRFSRHNISGGMLDLQFSYRYSENF HCCCCCCCEEEEEEECCCEEEEECCCCCCCCCEEEHHHHCCCCCCCEEEEEEEEEECCCC TFNLIGVGTTGRPGFDKDGTRANLRGGGYKTLMPGYSISNIGHDFTGGYALFSGKDSSGL EEEEEEECCCCCCCCCCCCCEEEECCCCEEEECCCCCHHCCCCCCCCCEEEEECCCCCCC YEYGVNGDFVVYGPLLLTLGYYRLYGTKSPYIENNRYFNFDNGYKTSTFFGHEVNINLRW EEECCCCCEEEECHHHHHHHHHEEECCCCCCCCCCCEEECCCCEEECEEECEEEEEEEEE NAFRDMQILMRSGYFIAGDGLKAYLDTTYGKILREFFVTAEHRF CCHHHHHHHHHCCCEEECCCCEEEHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA