| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116326876
Identifier: 116326876
GI number: 116326876
Start: 35067
End: 35945
Strand: Direct
Name: 116326876
Synonym: LBL_0028
Alternate gene names: NA
Gene position: 35067-35945 (Clockwise)
Preceding gene: 116326875
Following gene: 116326883
Centisome position: 0.97
GC content: 36.18
Gene sequence:
>879_bases ATGAAATCGATTGGTTGGAGGTTTTTGATTTGTTTTTGTACTATTTTAAGTTTTATAGATTGCCTTTCGAAAAGTCAAAA TCCAAAACGTGACGCGAATCGTTCGGAAAAAGTCGCATTAAAAAATTGTAATTCTTTATTCGGTCTATATGCTTTCACTT ACGGAAAAAGCCCGTATCCGGATCGTTTTTTAAACGTGAAAGAAGATGAAGGAAGTCGTGAGATCGTTTATCTTTTCTAT TTGATTCGGATTCCTGGGAAAAGAATTTTAATTGATGCAGGTTTCTTAAACGAATCTTACAAAAAGAAATTCGGTTTTAC AAGTTTTGAAGAACCGGATCGTCTGTTGAAAAAATGCGGAATCGATCCGAAAGAAATTACGGACATTGTACTAACGCATT TTCATTTTGATCATGCGGGAGGAATTTTTTTGTTTCCTTCCGCAATTTTACATATTCAAAATCACGATTTAGAACTTCTT AAAAAACAATCTTATTTTCCCAATCAGTCCGTTTATTTAAACTCTTTGATAAAGACCGGCCGTATTCATTCGTTTGACGG AACGTATTTCTTATTGCCGGAAATGAGGATTCTTTTTGCGGGTGGACATACTCCTGGATCTCAGGCATTGGAATGGATTG CGACGTCTGAGAAACGGTTTTTATTTACGGGTGATGAGTGTTATCTCGTTGAACCGTGTAAGAACGGAATTGGACTTACA AGCGAAGCGGCTTTTTCTTTAAAACGAAATCGAGATTTTATAGAATATGTTCGAATCTTGAGCGAGAAAGGAACCAAAAT TCTTACCTTGCACGACCCTGCAATTTTACTGGAAGGTGAAGAAATTGTTCCAGGTGTTCGATTGATTGAGTTTTTTTGA
Upstream 100 bases:
>100_bases TGTTGCCAGGTCATCTTCATAAAGGAATTTTAATGCAGTTTAGGACTCCTATTCAAAAAGGTTTTTCCAGGATTCAGAGT GAACCCGTAGAAACGTTAAA
Downstream 100 bases:
>100_bases TACGGAACGCGTTATTTGTACTTTTATTTAAAAAACGTGAATTTGGCATAACAAATACGAAAACATTTCAATTATGGAGT TTGCGGGCGATTCACCCAAA
Product: Zn-dependent hydrolase
Products: NA
Alternate protein names: Metallo-Beta-Lactamase Superfamily; Metallo-Beta-Lactamase Superfamily Protein; Metallo-Beta-Lactamase; Zn-Dependent Hydrolases Including Glyoxylases; Zn-Dependent Hydrolase
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MKSIGWRFLICFCTILSFIDCLSKSQNPKRDANRSEKVALKNCNSLFGLYAFTYGKSPYPDRFLNVKEDEGSREIVYLFY LIRIPGKRILIDAGFLNESYKKKFGFTSFEEPDRLLKKCGIDPKEITDIVLTHFHFDHAGGIFLFPSAILHIQNHDLELL KKQSYFPNQSVYLNSLIKTGRIHSFDGTYFLLPEMRILFAGGHTPGSQALEWIATSEKRFLFTGDECYLVEPCKNGIGLT SEAAFSLKRNRDFIEYVRILSEKGTKILTLHDPAILLEGEEIVPGVRLIEFF
Sequences:
>Translated_292_residues MKSIGWRFLICFCTILSFIDCLSKSQNPKRDANRSEKVALKNCNSLFGLYAFTYGKSPYPDRFLNVKEDEGSREIVYLFY LIRIPGKRILIDAGFLNESYKKKFGFTSFEEPDRLLKKCGIDPKEITDIVLTHFHFDHAGGIFLFPSAILHIQNHDLELL KKQSYFPNQSVYLNSLIKTGRIHSFDGTYFLLPEMRILFAGGHTPGSQALEWIATSEKRFLFTGDECYLVEPCKNGIGLT SEAAFSLKRNRDFIEYVRILSEKGTKILTLHDPAILLEGEEIVPGVRLIEFF >Mature_292_residues MKSIGWRFLICFCTILSFIDCLSKSQNPKRDANRSEKVALKNCNSLFGLYAFTYGKSPYPDRFLNVKEDEGSREIVYLFY LIRIPGKRILIDAGFLNESYKKKFGFTSFEEPDRLLKKCGIDPKEITDIVLTHFHFDHAGGIFLFPSAILHIQNHDLELL KKQSYFPNQSVYLNSLIKTGRIHSFDGTYFLLPEMRILFAGGHTPGSQALEWIATSEKRFLFTGDECYLVEPCKNGIGLT SEAAFSLKRNRDFIEYVRILSEKGTKILTLHDPAILLEGEEIVPGVRLIEFF
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33492; Mature: 33492
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSIGWRFLICFCTILSFIDCLSKSQNPKRDANRSEKVALKNCNSLFGLYAFTYGKSPYP CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHEECCCCCCC DRFLNVKEDEGSREIVYLFYLIRIPGKRILIDAGFLNESYKKKFGFTSFEEPDRLLKKCG HHHCCCCCCCCCCEEEEEEEEEECCCCEEEEEECCCCHHHHHHCCCCCCCCHHHHHHHCC IDPKEITDIVLTHFHFDHAGGIFLFPSAILHIQNHDLELLKKQSYFPNQSVYLNSLIKTG CCHHHHHHHHHHHEEECCCCCEEEECCEEEEECCCCHHHHHHHCCCCCCHHHHHHHHHCC RIHSFDGTYFLLPEMRILFAGGHTPGSQALEWIATSEKRFLFTGDECYLVEPCKNGIGLT CEEECCCCEEECCCEEEEEECCCCCHHHHHHHHHCCCCEEEEECCCEEEECCCCCCCCCC SEAAFSLKRNRDFIEYVRILSEKGTKILTLHDPAILLEGEEIVPGVRLIEFF HHHHHHHHCCCCHHHHHHHHHHCCCEEEEEECCEEEEECCHHCCCEEEEEEC >Mature Secondary Structure MKSIGWRFLICFCTILSFIDCLSKSQNPKRDANRSEKVALKNCNSLFGLYAFTYGKSPYP CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHEECCCCCCC DRFLNVKEDEGSREIVYLFYLIRIPGKRILIDAGFLNESYKKKFGFTSFEEPDRLLKKCG HHHCCCCCCCCCCEEEEEEEEEECCCCEEEEEECCCCHHHHHHCCCCCCCCHHHHHHHCC IDPKEITDIVLTHFHFDHAGGIFLFPSAILHIQNHDLELLKKQSYFPNQSVYLNSLIKTG CCHHHHHHHHHHHEEECCCCCEEEECCEEEEECCCCHHHHHHHCCCCCCHHHHHHHHHCC RIHSFDGTYFLLPEMRILFAGGHTPGSQALEWIATSEKRFLFTGDECYLVEPCKNGIGLT CEEECCCCEEECCCEEEEEECCCCCHHHHHHHHHCCCCEEEEECCCEEEECCCCCCCCCC SEAAFSLKRNRDFIEYVRILSEKGTKILTLHDPAILLEGEEIVPGVRLIEFF HHHHHHHHCCCCHHHHHHHHHHCCCEEEEEECCEEEEECCHHCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA