| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116326875
Identifier: 116326875
GI number: 116326875
Start: 34027
End: 35070
Strand: Direct
Name: 116326875
Synonym: LBL_0027
Alternate gene names: NA
Gene position: 34027-35070 (Clockwise)
Preceding gene: 116326874
Following gene: 116326876
Centisome position: 0.94
GC content: 37.45
Gene sequence:
>1044_bases ATGTTTCATTCTAAAACGATCCCATTTATTTTGATGGGATTTATAGTTCTCGGTTCGTTCTGTAAAACCTCCCCTTCAAA GGATTCCTGGATTGTTCCTTCTCTTGAGGAAAATGAAAAATTATTTTTAGCTCCTTTGAAAATCGATGAATTCAATTCTA GAGATTTGGGAGGTAGGCATTATCCTGCATCGAACGAACTTAGAATCGATCTTTTCAAACCTTATATAAAAAATTTAGAA GGTGGTTATCTCGGAGTTGGAACCGATCAGAATTTTACCTTCATTGCTTGGGCGAAAAGTAAATACGTATGGTTAATGGA TTTTGATTATACGATTTGTCTGATCAATCGGATTCATCTTTTATTCTTTAAACTTGCTTCCGATCCGGAAGCGTATCGGG AACTTTGGTCCCGAAGAAATAAAAGATCCTCCTTTGAACTTATAAAGAAAGAATGGGAAAACGATTCCGAATGGCCTTTG ATTCAAGAAGCATGGGAAATAGCGCATAGAGGTAAATCCGATGTTCCTCAAAGATGGAACGAGCTTGATCGAACTTCTGA GAGATTCGGTCTTAAGACTTTCATCCATTCCAAAGAAGAATATACCTATGTTCGTAATATGATTCTTCAAGGGAGAATTC AAGTTTTGAAAGGCGACATCAATGCCGGAAAAAGCATGAAATCCGTCGGAGAAAGAGCGGCAAGGTTGAATATTCCGATC CGAGTCGTATATTTGTCCAATATCGAGGATTATTTTTCTTATACTCAGGGCTTTCGAGACAACTTGCTTGGTTTACCCAC GGATGAAAAAGGAATCGTTTTAAGGACGATGCAAAACGGGACAAAAGAAGAATATGGATCTCCAGACGGAGAAAAAATTC CGGTTGATTATCCTTTGCATTATAATATTCAGTCTCTGAAAAATTTACAGGATTGGATGTTGTTGCCAGGTCATCTTCAT AAAGGAATTTTAATGCAGTTTAGGACTCCTATTCAAAAAGGTTTTTCCAGGATTCAGAGTGAACCCGTAGAAACGTTAAA ATGA
Upstream 100 bases:
>100_bases ACTTTTGATGACTTCTCTTTCAGCGATCACAGGAAAGAACTTTTACTCTCGGAACGAATGGTTGAACTGGTATAAACTCA ACTCGAAGTAAGTCACATTT
Downstream 100 bases:
>100_bases AATCGATTGGTTGGAGGTTTTTGATTTGTTTTTGTACTATTTTAAGTTTTATAGATTGCCTTTCGAAAAGTCAAAATCCA AAACGTGACGCGAATCGTTC
Product: lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 347; Mature: 347
Protein sequence:
>347_residues MFHSKTIPFILMGFIVLGSFCKTSPSKDSWIVPSLEENEKLFLAPLKIDEFNSRDLGGRHYPASNELRIDLFKPYIKNLE GGYLGVGTDQNFTFIAWAKSKYVWLMDFDYTICLINRIHLLFFKLASDPEAYRELWSRRNKRSSFELIKKEWENDSEWPL IQEAWEIAHRGKSDVPQRWNELDRTSERFGLKTFIHSKEEYTYVRNMILQGRIQVLKGDINAGKSMKSVGERAARLNIPI RVVYLSNIEDYFSYTQGFRDNLLGLPTDEKGIVLRTMQNGTKEEYGSPDGEKIPVDYPLHYNIQSLKNLQDWMLLPGHLH KGILMQFRTPIQKGFSRIQSEPVETLK
Sequences:
>Translated_347_residues MFHSKTIPFILMGFIVLGSFCKTSPSKDSWIVPSLEENEKLFLAPLKIDEFNSRDLGGRHYPASNELRIDLFKPYIKNLE GGYLGVGTDQNFTFIAWAKSKYVWLMDFDYTICLINRIHLLFFKLASDPEAYRELWSRRNKRSSFELIKKEWENDSEWPL IQEAWEIAHRGKSDVPQRWNELDRTSERFGLKTFIHSKEEYTYVRNMILQGRIQVLKGDINAGKSMKSVGERAARLNIPI RVVYLSNIEDYFSYTQGFRDNLLGLPTDEKGIVLRTMQNGTKEEYGSPDGEKIPVDYPLHYNIQSLKNLQDWMLLPGHLH KGILMQFRTPIQKGFSRIQSEPVETLK >Mature_347_residues MFHSKTIPFILMGFIVLGSFCKTSPSKDSWIVPSLEENEKLFLAPLKIDEFNSRDLGGRHYPASNELRIDLFKPYIKNLE GGYLGVGTDQNFTFIAWAKSKYVWLMDFDYTICLINRIHLLFFKLASDPEAYRELWSRRNKRSSFELIKKEWENDSEWPL IQEAWEIAHRGKSDVPQRWNELDRTSERFGLKTFIHSKEEYTYVRNMILQGRIQVLKGDINAGKSMKSVGERAARLNIPI RVVYLSNIEDYFSYTQGFRDNLLGLPTDEKGIVLRTMQNGTKEEYGSPDGEKIPVDYPLHYNIQSLKNLQDWMLLPGHLH KGILMQFRTPIQKGFSRIQSEPVETLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40515; Mature: 40515
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFHSKTIPFILMGFIVLGSFCKTSPSKDSWIVPSLEENEKLFLAPLKIDEFNSRDLGGRH CCCCCCHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCEEEEEEEEECCCCCCCCCCCC YPASNELRIDLFKPYIKNLEGGYLGVGTDQNFTFIAWAKSKYVWLMDFDYTICLINRIHL CCCCCCEEEEEHHHHHHCCCCCEEEECCCCCEEEEEEECCCEEEEEECCHHHHHHHHHHH LFFKLASDPEAYRELWSRRNKRSSFELIKKEWENDSEWPLIQEAWEIAHRGKSDVPQRWN HHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHH ELDRTSERFGLKTFIHSKEEYTYVRNMILQGRIQVLKGDINAGKSMKSVGERAARLNIPI HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHEECCCE RVVYLSNIEDYFSYTQGFRDNLLGLPTDEKGIVLRTMQNGTKEEYGSPDGEKIPVDYPLH EEEEECCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHCCCCCCCCCCCCCCCC YNIQSLKNLQDWMLLPGHLHKGILMQFRTPIQKGFSRIQSEPVETLK CCHHHHHCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCC >Mature Secondary Structure MFHSKTIPFILMGFIVLGSFCKTSPSKDSWIVPSLEENEKLFLAPLKIDEFNSRDLGGRH CCCCCCHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCEEEEEEEEECCCCCCCCCCCC YPASNELRIDLFKPYIKNLEGGYLGVGTDQNFTFIAWAKSKYVWLMDFDYTICLINRIHL CCCCCCEEEEEHHHHHHCCCCCEEEECCCCCEEEEEEECCCEEEEEECCHHHHHHHHHHH LFFKLASDPEAYRELWSRRNKRSSFELIKKEWENDSEWPLIQEAWEIAHRGKSDVPQRWN HHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHH ELDRTSERFGLKTFIHSKEEYTYVRNMILQGRIQVLKGDINAGKSMKSVGERAARLNIPI HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHEECCCE RVVYLSNIEDYFSYTQGFRDNLLGLPTDEKGIVLRTMQNGTKEEYGSPDGEKIPVDYPLH EEEEECCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHCCCCCCCCCCCCCCCC YNIQSLKNLQDWMLLPGHLHKGILMQFRTPIQKGFSRIQSEPVETLK CCHHHHHCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA