Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

Click here to switch to the map view.

The map label for this gene is ampG [C]

Identifier: 115353207

GI number: 115353207

Start: 3488539

End: 3489960

Strand: Direct

Name: ampG [C]

Synonym: Bamb_3156

Alternate gene names: 115353207

Gene position: 3488539-3489960 (Clockwise)

Preceding gene: 115353206

Following gene: 115353208

Centisome position: 98.09

GC content: 68.28

Gene sequence:

>1422_bases
ATGTCGAAAACGCCACACGAGGCGCCCGCGCTCACCGCTCACGAGGATCACCCCGGCTGGCGAGCCTATCTGAACACGCA
CATGCTGATCTGCGTGTTCCTCGGGTTCACGTCCGGTCTGCCCCTGTTCACGCTCGTCTACCTCGTGCAGGCATGGCTGC
GCTCCGAAGGCGTGAACCTGAAGGAAATCGGCCTGTTCGCGCTGATCCAGTTCCCGTATACGTGGAAGTTCCTGTGGGCG
CCGCTGATGGACCGCTACATCCCGCGCCTGCCCGGCTGGCGGCCGGGCCGCCGGCGCGGCTGGCTGCTGCTCACGCAGCT
GCTGGTCGCGGGCGCGATCGCCACGCTCGGCTTCGTGTCGCCGCGCGACTCGATCTGGACGGTCGCCGCGCTCACCACGC
TCGTCGCGTTCTTCGGCGCGAGCGCCGACATCGTGATCGACGCGTACCGCCGCGAACTGCTGCGCGACACCGAGCAGGGC
CTCGGCAACGCGGTGCACGTGAACGCCTACAAGCTCGCCGCGCTGATTCCCGGCTCGCTGGCGCTGATCCTGTCCGACCA
CATGCCGTGGGACGCCGTGTTCGCGATCACCGGCGCATTCATGCTGCCGGGCATCCTGATGACGCTCGTCGTGCGCGAGC
CCGAAGTGGTCGGCACGCCGCCGCGCAACCTGCGCGACGCGATCGTGCTGCCGTTCCGCGAATTCATCCAGCGCGACGGC
TGGGCCGGCGCGCTGCTGGTCATCGCGTTCATCTTCCTGTTCAAGATCGGCGACACGATGGCGACCACGCTGTCGACGTC
GTTCTTCCTCGACATCGGCTTCACGCGCACCGAGATCGGCATCGTCGCCAAAACCACCGCGCTGGTCGCGAGCGTCGCCG
GCGGCATCATCGGCGGCGTGTGGCTCGTGAAGATCGGGATCGGCCGCGGGCTGTGGATCTTCGGCGCGCTGCAGATGGTG
TCGACCCTCGGCTTCGCGTGGCTCGCGCAGCTCGGCCCCGGCTCGCCGGTGCTGGCCGTGCTGTACGACTTCACGGTATC
GACGAGCCACGCGATCGCGTCGGCGCTGTCGGTGTTCGGCGTCGTCGTCACGCCGCAGTTCAGCCCGATGACGGTCGCGC
TCGCGATCGTCTACGGCGTCGAAACCTTCACCACCGGCCTGACGATGGCCGCGTTCGTCGCGTACATCGCGAGCACGACC
GACCCGCGCTACACGGCCACGCAGTTCGCGCTGTTCACGAGCCTCGCGTCCGTGCCGCGCACGCTCGCGTCGGCCGCGAG
CGGCTTCATCGTCGCGAAGATCGGCTGGTTCGACTACTTCATCGTGTGCACCGCGCTCGCGATCCCCGGCATGCTGCTGC
TGTTCAAGATCGCGCCGTGGAACGGCGTCGCGCGCAACGGCGAGGCGAGCCGTGCGCAATGA

Upstream 100 bases:

>100_bases
GGATGATCCGGCCCGCACGCGCGTGCGGCCGCCCCCTTCTGCGCCGCTCGCGCCGCCTGCGCTGCCGCCGCAATCAGTCA
ACGCTACCCAGTTCCATTCC

Downstream 100 bases:

>100_bases
CCGCCTGCTTCGCGCCGCACGCGTCGCCGCCGCACTGAGCGTCGGCGTCGCGGCGCTCGGCGCGGCGGCAAGCACGCATC
CGACCGACGCCGGGGCAGCC

Product: major facilitator transporter

Products: NA

Alternate protein names: ORF3 [H]

Number of amino acids: Translated: 473; Mature: 472

Protein sequence:

>473_residues
MSKTPHEAPALTAHEDHPGWRAYLNTHMLICVFLGFTSGLPLFTLVYLVQAWLRSEGVNLKEIGLFALIQFPYTWKFLWA
PLMDRYIPRLPGWRPGRRRGWLLLTQLLVAGAIATLGFVSPRDSIWTVAALTTLVAFFGASADIVIDAYRRELLRDTEQG
LGNAVHVNAYKLAALIPGSLALILSDHMPWDAVFAITGAFMLPGILMTLVVREPEVVGTPPRNLRDAIVLPFREFIQRDG
WAGALLVIAFIFLFKIGDTMATTLSTSFFLDIGFTRTEIGIVAKTTALVASVAGGIIGGVWLVKIGIGRGLWIFGALQMV
STLGFAWLAQLGPGSPVLAVLYDFTVSTSHAIASALSVFGVVVTPQFSPMTVALAIVYGVETFTTGLTMAAFVAYIASTT
DPRYTATQFALFTSLASVPRTLASAASGFIVAKIGWFDYFIVCTALAIPGMLLLFKIAPWNGVARNGEASRAQ

Sequences:

>Translated_473_residues
MSKTPHEAPALTAHEDHPGWRAYLNTHMLICVFLGFTSGLPLFTLVYLVQAWLRSEGVNLKEIGLFALIQFPYTWKFLWA
PLMDRYIPRLPGWRPGRRRGWLLLTQLLVAGAIATLGFVSPRDSIWTVAALTTLVAFFGASADIVIDAYRRELLRDTEQG
LGNAVHVNAYKLAALIPGSLALILSDHMPWDAVFAITGAFMLPGILMTLVVREPEVVGTPPRNLRDAIVLPFREFIQRDG
WAGALLVIAFIFLFKIGDTMATTLSTSFFLDIGFTRTEIGIVAKTTALVASVAGGIIGGVWLVKIGIGRGLWIFGALQMV
STLGFAWLAQLGPGSPVLAVLYDFTVSTSHAIASALSVFGVVVTPQFSPMTVALAIVYGVETFTTGLTMAAFVAYIASTT
DPRYTATQFALFTSLASVPRTLASAASGFIVAKIGWFDYFIVCTALAIPGMLLLFKIAPWNGVARNGEASRAQ
>Mature_472_residues
SKTPHEAPALTAHEDHPGWRAYLNTHMLICVFLGFTSGLPLFTLVYLVQAWLRSEGVNLKEIGLFALIQFPYTWKFLWAP
LMDRYIPRLPGWRPGRRRGWLLLTQLLVAGAIATLGFVSPRDSIWTVAALTTLVAFFGASADIVIDAYRRELLRDTEQGL
GNAVHVNAYKLAALIPGSLALILSDHMPWDAVFAITGAFMLPGILMTLVVREPEVVGTPPRNLRDAIVLPFREFIQRDGW
AGALLVIAFIFLFKIGDTMATTLSTSFFLDIGFTRTEIGIVAKTTALVASVAGGIIGGVWLVKIGIGRGLWIFGALQMVS
TLGFAWLAQLGPGSPVLAVLYDFTVSTSHAIASALSVFGVVVTPQFSPMTVALAIVYGVETFTTGLTMAAFVAYIASTTD
PRYTATQFALFTSLASVPRTLASAASGFIVAKIGWFDYFIVCTALAIPGMLLLFKIAPWNGVARNGEASRAQ

Specific function: Probably Acts As A Permease In The Beta-Lactamase Induction System And In Peptidoglycan Recycling. [C]

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli AmpG and yeast YBR220c [H]

Homologues:

Organism=Homo sapiens, GI19923957, Length=279, Percent_Identity=29.3906810035842, Blast_Score=66, Evalue=9e-11,
Organism=Escherichia coli, GI1786636, Length=437, Percent_Identity=35.2402745995423, Blast_Score=251, Evalue=8e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004752
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 51225; Mature: 51094

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKTPHEAPALTAHEDHPGWRAYLNTHMLICVFLGFTSGLPLFTLVYLVQAWLRSEGVNL
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCH
KEIGLFALIQFPYTWKFLWAPLMDRYIPRLPGWRPGRRRGWLLLTQLLVAGAIATLGFVS
HHHHHHHEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
PRDSIWTVAALTTLVAFFGASADIVIDAYRRELLRDTEQGLGNAVHVNAYKLAALIPGSL
CCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHCCCCEEEEEHHHEEHHCCCCE
ALILSDHMPWDAVFAITGAFMLPGILMTLVVREPEVVGTPPRNLRDAIVLPFREFIQRDG
EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
WAGALLVIAFIFLFKIGDTMATTLSTSFFLDIGFTRTEIGIVAKTTALVASVAGGIIGGV
CCHHHHHHHHHHHHHHCCHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
WLVKIGIGRGLWIFGALQMVSTLGFAWLAQLGPGSPVLAVLYDFTVSTSHAIASALSVFG
HHEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHEEHHHCCHHHHHHHHHHHHH
VVVTPQFSPMTVALAIVYGVETFTTGLTMAAFVAYIASTTDPRYTATQFALFTSLASVPR
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
TLASAASGFIVAKIGWFDYFIVCTALAIPGMLLLFKIAPWNGVARNGEASRAQ
HHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SKTPHEAPALTAHEDHPGWRAYLNTHMLICVFLGFTSGLPLFTLVYLVQAWLRSEGVNL
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCH
KEIGLFALIQFPYTWKFLWAPLMDRYIPRLPGWRPGRRRGWLLLTQLLVAGAIATLGFVS
HHHHHHHEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
PRDSIWTVAALTTLVAFFGASADIVIDAYRRELLRDTEQGLGNAVHVNAYKLAALIPGSL
CCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHCCCCEEEEEHHHEEHHCCCCE
ALILSDHMPWDAVFAITGAFMLPGILMTLVVREPEVVGTPPRNLRDAIVLPFREFIQRDG
EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
WAGALLVIAFIFLFKIGDTMATTLSTSFFLDIGFTRTEIGIVAKTTALVASVAGGIIGGV
CCHHHHHHHHHHHHHHCCHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
WLVKIGIGRGLWIFGALQMVSTLGFAWLAQLGPGSPVLAVLYDFTVSTSHAIASALSVFG
HHEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHEEHHHCCHHHHHHHHHHHHH
VVVTPQFSPMTVALAIVYGVETFTTGLTMAAFVAYIASTTDPRYTATQFALFTSLASVPR
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
TLASAASGFIVAKIGWFDYFIVCTALAIPGMLLLFKIAPWNGVARNGEASRAQ
HHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1956282; 7542800 [H]