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The map label for this gene is yfgC [C]

Identifier: 115353208

GI number: 115353208

Start: 3489950

End: 3490984

Strand: Direct

Name: yfgC [C]

Synonym: Bamb_3157

Alternate gene names: 115353208

Gene position: 3489950-3490984 (Clockwise)

Preceding gene: 115353207

Following gene: 115353210

Centisome position: 98.13

GC content: 71.88

Gene sequence:

>1035_bases
GTGCGCAATGACCGCCTGCTTCGCGCCGCACGCGTCGCCGCCGCACTGAGCGTCGGCGTCGCGGCGCTCGGCGCGGCGGC
AAGCACGCATCCGACCGACGCCGGGGCAGCCGCGGCCGGCTCCGCGGCGGCTGCGCCGTCCACGCCGGCGACCACCGTCG
CGCCGTCTGCCGCCGAAGCCGCGCAGCCGAGCGGCGGGGCCGTGCCGTCGAAAGCCTATGCGCCGACGTCGCAGCAGGTC
CGCTACGGCGACGCGATCGCGTTCCGCACGCTGATCCCGTCGCCGCTGCTCGAACAGCTGACCGCGAGCGAATACGCGCA
GATCGTGCAAACGGCCGCCGACAGCGACCGCCTGCTGCCCGCGAATCAGCCGCGCGTGAAACGCCTGCGCGCGATCGTCA
TGAAGCTGGCGCCGTATTCGGTGAAGTGGAACGATCGCGTGAAGAGCTGGGCGTGGGACGTCAATGCGATCCGCTCGCGC
GACATCCGCGTCACGTGCCTGCCGGGCGGCAAGGTGCTCGTGTACGGCGGGATGCTCGATCGCGTCCGCCTGAACGACGA
CGAACTCGGCGTGCTGCTTGCGCACGGCATCGCCCATGCGCTGCGCGAACACGCACGCAGCAATCTCGGCACGGCGTCGC
AAACGTCGCTGCGCGCGGCCGCGCTGCCGCCGCTGTTCGGCGTCGGCGATCCGCTGCCGCAGGCGCTGAACCTCGGCGCA
CGTCTGCAGACGCTGCGCTACGACCCGACCGACGAGACCGAAGCCGACGTGATCGGCGGCGACATCGCCGCCCGCGCGGG
CTTCGATCCGCGCGCGGCGATCACGCTGTGGGACAAGCTCGCGGCGGCCACCCGCGCGAACAAGACGTCGGGATTCATCT
ACACGCATCCGTACGGCGCGACGCGGCGGCAGGATCTGCTGAACCGGCTGCAGGACCTGATGCCGCTGTATGCGAAGGCG
ACGGGCAAGCGCGTCGACACGCTGCCCGACTATGCGGGCATCAGCGCGCAGCGACGCAAGGTCGCGCGGCGCTGA

Upstream 100 bases:

>100_bases
GACTACTTCATCGTGTGCACCGCGCTCGCGATCCCCGGCATGCTGCTGCTGTTCAAGATCGCGCCGTGGAACGGCGTCGC
GCGCAACGGCGAGGCGAGCC

Downstream 100 bases:

>100_bases
GCATCGCCGCAGGCCGCGGCTTTCCGTCGGGCATCGCCAGCGTGTGACGCGGCGCTACGCGCCGACGCCCGATTCGACCG
GCCGGCTGCCGCTCTCGCGC

Product: peptidase M48, Ste24p

Products: NA

Alternate protein names: M48 Family Peptidase; Lipoprotein; Zn-Dependent Protease With Chaperone Function; Zn-Dependent Protease; Peptidase M; HtpX Protein; Exported Peptidase; Membrane-Associated Zinc Metalloprotease Peptidase; Zinc Metallopeptidase; Peptidase Family; Signal Peptide; Peptidase Protein; M48 Family Metalloprotease; Zn-Dependent Protease With Chaperone Function Protein; Signal Peptide Protein; Peptidase Family M; M48 Family Zinc Metallopeptidase; Zinc Metalloprotease; M48-Family Peptidase

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MRNDRLLRAARVAAALSVGVAALGAAASTHPTDAGAAAAGSAAAAPSTPATTVAPSAAEAAQPSGGAVPSKAYAPTSQQV
RYGDAIAFRTLIPSPLLEQLTASEYAQIVQTAADSDRLLPANQPRVKRLRAIVMKLAPYSVKWNDRVKSWAWDVNAIRSR
DIRVTCLPGGKVLVYGGMLDRVRLNDDELGVLLAHGIAHALREHARSNLGTASQTSLRAAALPPLFGVGDPLPQALNLGA
RLQTLRYDPTDETEADVIGGDIAARAGFDPRAAITLWDKLAAATRANKTSGFIYTHPYGATRRQDLLNRLQDLMPLYAKA
TGKRVDTLPDYAGISAQRRKVARR

Sequences:

>Translated_344_residues
MRNDRLLRAARVAAALSVGVAALGAAASTHPTDAGAAAAGSAAAAPSTPATTVAPSAAEAAQPSGGAVPSKAYAPTSQQV
RYGDAIAFRTLIPSPLLEQLTASEYAQIVQTAADSDRLLPANQPRVKRLRAIVMKLAPYSVKWNDRVKSWAWDVNAIRSR
DIRVTCLPGGKVLVYGGMLDRVRLNDDELGVLLAHGIAHALREHARSNLGTASQTSLRAAALPPLFGVGDPLPQALNLGA
RLQTLRYDPTDETEADVIGGDIAARAGFDPRAAITLWDKLAAATRANKTSGFIYTHPYGATRRQDLLNRLQDLMPLYAKA
TGKRVDTLPDYAGISAQRRKVARR
>Mature_344_residues
MRNDRLLRAARVAAALSVGVAALGAAASTHPTDAGAAAAGSAAAAPSTPATTVAPSAAEAAQPSGGAVPSKAYAPTSQQV
RYGDAIAFRTLIPSPLLEQLTASEYAQIVQTAADSDRLLPANQPRVKRLRAIVMKLAPYSVKWNDRVKSWAWDVNAIRSR
DIRVTCLPGGKVLVYGGMLDRVRLNDDELGVLLAHGIAHALREHARSNLGTASQTSLRAAALPPLFGVGDPLPQALNLGA
RLQTLRYDPTDETEADVIGGDIAARAGFDPRAAITLWDKLAAATRANKTSGFIYTHPYGATRRQDLLNRLQDLMPLYAKA
TGKRVDTLPDYAGISAQRRKVARR

Specific function: Unknown

COG id: COG0501

COG function: function code O; Zn-dependent protease with chaperone function

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788840, Length=178, Percent_Identity=27.5280898876405, Blast_Score=62, Evalue=5e-11,
Organism=Escherichia coli, GI87082185, Length=193, Percent_Identity=24.8704663212435, Blast_Score=62, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6322940, Length=247, Percent_Identity=27.5303643724696, Blast_Score=76, Evalue=9e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36465; Mature: 36465

Theoretical pI: Translated: 10.58; Mature: 10.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNDRLLRAARVAAALSVGVAALGAAASTHPTDAGAAAAGSAAAAPSTPATTVAPSAAEA
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCHHHH
AQPSGGAVPSKAYAPTSQQVRYGDAIAFRTLIPSPLLEQLTASEYAQIVQTAADSDRLLP
CCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
ANQPRVKRLRAIVMKLAPYSVKWNDRVKSWAWDVNAIRSRDIRVTCLPGGKVLVYGGMLD
CCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCHHHHCCCCEEEEEECCCEEEEECCCCC
RVRLNDDELGVLLAHGIAHALREHARSNLGTASQTSLRAAALPPLFGVGDPLPQALNLGA
EEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHHCCCH
RLQTLRYDPTDETEADVIGGDIAARAGFDPRAAITLWDKLAAATRANKTSGFIYTHPYGA
HHHEEECCCCCCCCHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCC
TRRQDLLNRLQDLMPLYAKATGKRVDTLPDYAGISAQRRKVARR
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCC
>Mature Secondary Structure
MRNDRLLRAARVAAALSVGVAALGAAASTHPTDAGAAAAGSAAAAPSTPATTVAPSAAEA
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCHHHH
AQPSGGAVPSKAYAPTSQQVRYGDAIAFRTLIPSPLLEQLTASEYAQIVQTAADSDRLLP
CCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
ANQPRVKRLRAIVMKLAPYSVKWNDRVKSWAWDVNAIRSRDIRVTCLPGGKVLVYGGMLD
CCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCHHHHCCCCEEEEEECCCEEEEECCCCC
RVRLNDDELGVLLAHGIAHALREHARSNLGTASQTSLRAAALPPLFGVGDPLPQALNLGA
EEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHHCCCH
RLQTLRYDPTDETEADVIGGDIAARAGFDPRAAITLWDKLAAATRANKTSGFIYTHPYGA
HHHEEECCCCCCCCHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCC
TRRQDLLNRLQDLMPLYAKATGKRVDTLPDYAGISAQRRKVARR
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA