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The map label for this gene is fliH

Identifier: 115353162

GI number: 115353162

Start: 3432092

End: 3432775

Strand: Direct

Name: fliH

Synonym: Bamb_3111

Alternate gene names: 115353162

Gene position: 3432092-3432775 (Clockwise)

Preceding gene: 115353161

Following gene: 115353163

Centisome position: 96.5

GC content: 73.98

Gene sequence:

>684_bases
ATGTCTGATTCCGTGCGCGATCGGGCCGCCACCCTCACCGCGTACCAGCGGTGGGAGATGGCGTCGTTCGATCCGCCGCC
GCCCCCGCCGCCGCCCGACGACGCGGCCGCGGCCGCGGCCGCGCTCGCCGAGGAACTGCAGCGCGTGCGCGACGCCGCGC
ATGCCGAAGGCCATGCGGCCGGTCACGTCGAAGGCCAGGCGCTGGGTTACCAGGCCGGTTTCGACCAGGGCCGCGAGCAG
GGTTTCGAGGCCGGCCAGGCCGAAGCCCGCGAACAGGCCGCGCAGCTCGCGGCGCTCGCCGCGTCGTTCCGCGAAGCCGT
GTCGAGCGCCGAGCACGATCTCGCGTCCGATCTCGCGCAACTCGCGCTCGACATCGCGCAGCAGGTCGTGCGCCAGCACG
TCAAGCACGATCCCGCGGCGCTCGTCGCGGCCGTGCGCGACGTGCTCGCCGCCGAACCGGCGTTGTCCGGCGCGCCGCAT
CTCGCGGTGAATCCGGCCGACCTGCCCGTCGTCGAAGCCTATCTGCAGGACGATCTCGATACGCTCGGCTGGACCGTGCG
CACCGACACGTCGATCGAGCGCGGCGGCTGCCGCGCGCACGCCGCGACGGGCGAGGTCGACGCGACGCTGCCCACCCGCT
GGCAGCGTGTCGCCGCCGCGATCGGCAAGGTGAGCGCATGGTGA

Upstream 100 bases:

>100_bases
GTGTCGGAAGTCGAGACGCAGCAGCGCCGCATCCTGCAGATCGTGCGCAACCTCGCCGAAAGCGGTCAGATCGTGATCGG
CGGCAAGGCGGAAGACGCAT

Downstream 100 bases:

>100_bases
CGCCCACGCCCGAATCGATCCTGTACGACGGGATGACGCCGCTCGAGCGCGAACTCGCGCTCGCGTCGTTCGGCCCCGAC
GGCGCGCATGACCCCGCACA

Product: flagellar assembly protein H

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MSDSVRDRAATLTAYQRWEMASFDPPPPPPPPDDAAAAAAALAEELQRVRDAAHAEGHAAGHVEGQALGYQAGFDQGREQ
GFEAGQAEAREQAAQLAALAASFREAVSSAEHDLASDLAQLALDIAQQVVRQHVKHDPAALVAAVRDVLAAEPALSGAPH
LAVNPADLPVVEAYLQDDLDTLGWTVRTDTSIERGGCRAHAATGEVDATLPTRWQRVAAAIGKVSAW

Sequences:

>Translated_227_residues
MSDSVRDRAATLTAYQRWEMASFDPPPPPPPPDDAAAAAAALAEELQRVRDAAHAEGHAAGHVEGQALGYQAGFDQGREQ
GFEAGQAEAREQAAQLAALAASFREAVSSAEHDLASDLAQLALDIAQQVVRQHVKHDPAALVAAVRDVLAAEPALSGAPH
LAVNPADLPVVEAYLQDDLDTLGWTVRTDTSIERGGCRAHAATGEVDATLPTRWQRVAAAIGKVSAW
>Mature_226_residues
SDSVRDRAATLTAYQRWEMASFDPPPPPPPPDDAAAAAAALAEELQRVRDAAHAEGHAAGHVEGQALGYQAGFDQGREQG
FEAGQAEAREQAAQLAALAASFREAVSSAEHDLASDLAQLALDIAQQVVRQHVKHDPAALVAAVRDVLAAEPALSGAPHL
AVNPADLPVVEAYLQDDLDTLGWTVRTDTSIERGGCRAHAATGEVDATLPTRWQRVAAAIGKVSAW

Specific function: Needed for flagellar regrowth and assembly [H]

COG id: COG1317

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway protein

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliH family [H]

Homologues:

Organism=Escherichia coli, GI87082004, Length=169, Percent_Identity=37.2781065088757, Blast_Score=105, Evalue=4e-24,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000563
- InterPro:   IPR018035 [H]

Pfam domain/function: PF02108 FliH [H]

EC number: NA

Molecular weight: Translated: 23828; Mature: 23697

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDSVRDRAATLTAYQRWEMASFDPPPPPPPPDDAAAAAAALAEELQRVRDAAHAEGHAA
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
GHVEGQALGYQAGFDQGREQGFEAGQAEAREQAAQLAALAASFREAVSSAEHDLASDLAQ
CCCCCHHHCCHHCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LALDIAQQVVRQHVKHDPAALVAAVRDVLAAEPALSGAPHLAVNPADLPVVEAYLQDDLD
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHH
TLGWTVRTDTSIERGGCRAHAATGEVDATLPTRWQRVAAAIGKVSAW
HHCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SDSVRDRAATLTAYQRWEMASFDPPPPPPPPDDAAAAAAALAEELQRVRDAAHAEGHAA
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
GHVEGQALGYQAGFDQGREQGFEAGQAEAREQAAQLAALAASFREAVSSAEHDLASDLAQ
CCCCCHHHCCHHCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LALDIAQQVVRQHVKHDPAALVAAVRDVLAAEPALSGAPHLAVNPADLPVVEAYLQDDLD
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHH
TLGWTVRTDTSIERGGCRAHAATGEVDATLPTRWQRVAAAIGKVSAW
HHCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 8224881 [H]