Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is fliI [H]

Identifier: 115353163

GI number: 115353163

Start: 3432769

End: 3434310

Strand: Direct

Name: fliI [H]

Synonym: Bamb_3112

Alternate gene names: 115353163

Gene position: 3432769-3434310 (Clockwise)

Preceding gene: 115353162

Following gene: 115353164

Centisome position: 96.52

GC content: 71.66

Gene sequence:

>1542_bases
ATGGTGACGCCCACGCCCGAATCGATCCTGTACGACGGGATGACGCCGCTCGAGCGCGAACTCGCGCTCGCGTCGTTCGG
CCCCGACGGCGCGCATGACCCCGCACACGGCGCCGCTCCGCACGCGGCACCCGCTGCGGACGACGCGCCGCGCGCCCCGC
ACAATCCGCATCTCGCGCACTGGCGCACGCACCTGAACGGCCTCGCGACGCGCAGCCAGCGCGCGCTGCCGCTGCGGCCG
TGCGGGCGCCTCACGCGCGCCGCGGGCCTCGTGCTCGAGGCGATCGGGCTGCGCCTGTCGGTCGGCGCCGAATGCACGAT
CGAACTGCCGCCCGGCAGCACGCTGCCGCACGCGGAAGCGGAAGTCGTCGGGTTCTCCGGCGATCGCCTGTTCCTGATGC
CGACCACCGACGTCGCCGGCGTGCTGCCCGGCGCACGCGTGTGGCCGCGCGAAAGCGCGCCCGTCGCCGATCCGCTCGCG
GGCGCCAAACGGCTGCCGGTCGGCTGGGAGATGCTCGGGCGTGTCGTCGATGCGTCGGGCCGCCCGCTCGATGGCCTCGG
CCCGCTCGCGTCGAAGGTCGACGCTTCGCTGTCGGCGCCGTCGATCAATCCGCTCGATCGCGAGCCGATCCACAGCGTGC
TCGACGTCGGCGTGCGCGCGATCAACGCGCTGCTCACCGTCGGCCGCGGGCAGCGGATGGGCCTGTTCGCGGGGTCCGGC
GTCGGCAAGTCGGTGCTGCTCGGCACGATGGCGCGCTACACCAGCGCGGAAGTGATCGTGATCGGGCTGATCGGCGAACG
CGGCCGCGAAGTGAAGGAATTCATCGAACAAATCCTCGGCGAGGACGGGCTCGCGCGCTCGGTCGTCGTCGCGGCGCCGG
CCGACGTGTCGCCGCTGCTGCGGATGCAGGGCGCCGCCTACGCGACGTCGCTCGCCGAGTATTTCCGCGATCAGGGCAAG
CACGTGCTGCTGCTGATGGATTCGCTGACGCGCTACGCGATGGCGCAGCGCGAGATCGCGCTCGCGATCGGCGAGCCGCC
CGCGACCAAGGGCTATCCTCCGTCGGTGTTCGCGAAGCTGCCCGCGCTCGTCGAGCGCACCGGCAACGGGCCCGAAGGCG
GCGGCTCGATCACCGCGTTCTACACGGTGCTGACCGAAGGCGACGACCAGCAGGACCCGATTGCCGACTCGGCGCGCGCG
ATCCTCGACGGCCACATCGTGCTGTCGCGCGCGCTCGCCGAGGCCGGCCACTATCCGGCGATCGACATCGAGGCGTCGAT
CAGCCGCGCGATGACCGCGCTGATCGACGAAACGCATCTCGACCGCGTGCGGCAGTTCAAGCAGATGCTGTCGCGCTACC
AGCGCAATCGCGACCTGATCGCGGTCGGCGCGTATGCACCGGGCCGCGACGCGCAGCTCGACCGCGCGATCGCGCTCTAT
CCGCGCATCGAATCGTTCCTGCAGCAGGGCTTTCGCGAATGCGCGCCGTTCGCGTCGAGCCTCGCCGGGCTCGATGCGCT
GTTCGACGTACACGGAGGCTGA

Upstream 100 bases:

>100_bases
AGCGCGGCGGCTGCCGCGCGCACGCCGCGACGGGCGAGGTCGACGCGACGCTGCCCACCCGCTGGCAGCGTGTCGCCGCC
GCGATCGGCAAGGTGAGCGC

Downstream 100 bases:

>100_bases
TTCCGATGGCACACGGCTTTCCCCTTCAACTGCTGCTCGACCGCGCGCAGGAAGATCTCGACACGGCCACGAAGCAGCTC
GGCACCGCGCAGCGCGACCG

Product: flagellar protein export ATPase FliI

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 513; Mature: 513

Protein sequence:

>513_residues
MVTPTPESILYDGMTPLERELALASFGPDGAHDPAHGAAPHAAPAADDAPRAPHNPHLAHWRTHLNGLATRSQRALPLRP
CGRLTRAAGLVLEAIGLRLSVGAECTIELPPGSTLPHAEAEVVGFSGDRLFLMPTTDVAGVLPGARVWPRESAPVADPLA
GAKRLPVGWEMLGRVVDASGRPLDGLGPLASKVDASLSAPSINPLDREPIHSVLDVGVRAINALLTVGRGQRMGLFAGSG
VGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVVAAPADVSPLLRMQGAAYATSLAEYFRDQGK
HVLLLMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARA
ILDGHIVLSRALAEAGHYPAIDIEASISRAMTALIDETHLDRVRQFKQMLSRYQRNRDLIAVGAYAPGRDAQLDRAIALY
PRIESFLQQGFRECAPFASSLAGLDALFDVHGG

Sequences:

>Translated_513_residues
MVTPTPESILYDGMTPLERELALASFGPDGAHDPAHGAAPHAAPAADDAPRAPHNPHLAHWRTHLNGLATRSQRALPLRP
CGRLTRAAGLVLEAIGLRLSVGAECTIELPPGSTLPHAEAEVVGFSGDRLFLMPTTDVAGVLPGARVWPRESAPVADPLA
GAKRLPVGWEMLGRVVDASGRPLDGLGPLASKVDASLSAPSINPLDREPIHSVLDVGVRAINALLTVGRGQRMGLFAGSG
VGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVVAAPADVSPLLRMQGAAYATSLAEYFRDQGK
HVLLLMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARA
ILDGHIVLSRALAEAGHYPAIDIEASISRAMTALIDETHLDRVRQFKQMLSRYQRNRDLIAVGAYAPGRDAQLDRAIALY
PRIESFLQQGFRECAPFASSLAGLDALFDVHGG
>Mature_513_residues
MVTPTPESILYDGMTPLERELALASFGPDGAHDPAHGAAPHAAPAADDAPRAPHNPHLAHWRTHLNGLATRSQRALPLRP
CGRLTRAAGLVLEAIGLRLSVGAECTIELPPGSTLPHAEAEVVGFSGDRLFLMPTTDVAGVLPGARVWPRESAPVADPLA
GAKRLPVGWEMLGRVVDASGRPLDGLGPLASKVDASLSAPSINPLDREPIHSVLDVGVRAINALLTVGRGQRMGLFAGSG
VGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVVAAPADVSPLLRMQGAAYATSLAEYFRDQGK
HVLLLMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARA
ILDGHIVLSRALAEAGHYPAIDIEASISRAMTALIDETHLDRVRQFKQMLSRYQRNRDLIAVGAYAPGRDAQLDRAIALY
PRIESFLQQGFRECAPFASSLAGLDALFDVHGG

Specific function: Probable catalytic subunit of a protein translocase for flagellum-specific export, or a proton translocase involved in local circuits at the flagellum. May be involved in a specialized protein export pathway that proceeds without signal peptide cleavage [

COG id: COG1157

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway ATPase

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase alpha/beta chains family [H]

Homologues:

Organism=Homo sapiens, GI32189394, Length=354, Percent_Identity=30.225988700565, Blast_Score=154, Evalue=1e-37,
Organism=Homo sapiens, GI50345984, Length=350, Percent_Identity=32, Blast_Score=147, Evalue=3e-35,
Organism=Homo sapiens, GI4757810, Length=350, Percent_Identity=32, Blast_Score=147, Evalue=3e-35,
Organism=Homo sapiens, GI19913424, Length=334, Percent_Identity=27.8443113772455, Blast_Score=116, Evalue=4e-26,
Organism=Homo sapiens, GI19913428, Length=319, Percent_Identity=27.5862068965517, Blast_Score=111, Evalue=2e-24,
Organism=Homo sapiens, GI19913426, Length=355, Percent_Identity=27.0422535211268, Blast_Score=110, Evalue=3e-24,
Organism=Escherichia coli, GI1788251, Length=431, Percent_Identity=72.8538283062645, Blast_Score=585, Evalue=1e-168,
Organism=Escherichia coli, GI1790170, Length=412, Percent_Identity=29.8543689320388, Blast_Score=157, Evalue=1e-39,
Organism=Escherichia coli, GI1790172, Length=368, Percent_Identity=26.3586956521739, Blast_Score=119, Evalue=7e-28,
Organism=Escherichia coli, GI1790217, Length=244, Percent_Identity=27.4590163934426, Blast_Score=66, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI25144756, Length=359, Percent_Identity=30.3621169916435, Blast_Score=150, Evalue=2e-36,
Organism=Caenorhabditis elegans, GI71988080, Length=342, Percent_Identity=30.7017543859649, Blast_Score=137, Evalue=2e-32,
Organism=Caenorhabditis elegans, GI71988063, Length=342, Percent_Identity=30.7017543859649, Blast_Score=137, Evalue=2e-32,
Organism=Caenorhabditis elegans, GI71988074, Length=327, Percent_Identity=29.0519877675841, Blast_Score=120, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI17510931, Length=317, Percent_Identity=28.0757097791798, Blast_Score=116, Evalue=3e-26,
Organism=Caenorhabditis elegans, GI17570191, Length=359, Percent_Identity=27.8551532033426, Blast_Score=115, Evalue=4e-26,
Organism=Caenorhabditis elegans, GI17565854, Length=323, Percent_Identity=28.4829721362229, Blast_Score=110, Evalue=1e-24,
Organism=Saccharomyces cerevisiae, GI6319370, Length=349, Percent_Identity=31.8051575931232, Blast_Score=152, Evalue=1e-37,
Organism=Saccharomyces cerevisiae, GI6322581, Length=347, Percent_Identity=30.2593659942363, Blast_Score=148, Evalue=2e-36,
Organism=Saccharomyces cerevisiae, GI6319603, Length=360, Percent_Identity=29.1666666666667, Blast_Score=123, Evalue=6e-29,
Organism=Saccharomyces cerevisiae, GI6320016, Length=283, Percent_Identity=27.208480565371, Blast_Score=98, Evalue=3e-21,
Organism=Drosophila melanogaster, GI24638766, Length=347, Percent_Identity=30.835734870317, Blast_Score=154, Evalue=1e-37,
Organism=Drosophila melanogaster, GI24658560, Length=342, Percent_Identity=30.7017543859649, Blast_Score=139, Evalue=4e-33,
Organism=Drosophila melanogaster, GI28574560, Length=350, Percent_Identity=30, Blast_Score=137, Evalue=2e-32,
Organism=Drosophila melanogaster, GI281361666, Length=320, Percent_Identity=27.8125, Blast_Score=117, Evalue=2e-26,
Organism=Drosophila melanogaster, GI24646341, Length=320, Percent_Identity=27.8125, Blast_Score=117, Evalue=2e-26,
Organism=Drosophila melanogaster, GI17136796, Length=320, Percent_Identity=27.8125, Blast_Score=117, Evalue=2e-26,
Organism=Drosophila melanogaster, GI20129479, Length=332, Percent_Identity=26.5060240963855, Blast_Score=112, Evalue=4e-25,
Organism=Drosophila melanogaster, GI24583988, Length=332, Percent_Identity=26.2048192771084, Blast_Score=111, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24583986, Length=332, Percent_Identity=26.2048192771084, Blast_Score=111, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24583984, Length=332, Percent_Identity=26.2048192771084, Blast_Score=111, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24583992, Length=324, Percent_Identity=27.1604938271605, Blast_Score=109, Evalue=4e-24,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020003
- InterPro:   IPR000194
- InterPro:   IPR003593
- InterPro:   IPR005714
- InterPro:   IPR020005 [H]

Pfam domain/function: PF00006 ATP-synt_ab [H]

EC number: =3.6.3.14 [H]

Molecular weight: Translated: 54305; Mature: 54305

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: PS00152 ATPASE_ALPHA_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTPTPESILYDGMTPLERELALASFGPDGAHDPAHGAAPHAAPAADDAPRAPHNPHLAH
CCCCCCHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
WRTHLNGLATRSQRALPLRPCGRLTRAAGLVLEAIGLRLSVGAECTIELPPGSTLPHAEA
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCEEECCCEEEEECCCCCCCCCCCC
EVVGFSGDRLFLMPTTDVAGVLPGARVWPRESAPVADPLAGAKRLPVGWEMLGRVVDASG
EEEECCCCEEEEEECCHHHHCCCCCCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHCCCC
RPLDGLGPLASKVDASLSAPSINPLDREPIHSVLDVGVRAINALLTVGRGQRMGLFAGSG
CCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC
VGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVVAAPADVSPLL
CCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHH
RMQGAAYATSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKL
HHCCHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHH
PALVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRALAEAGHYPA
HHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCE
IDIEASISRAMTALIDETHLDRVRQFKQMLSRYQRNRDLIAVGAYAPGRDAQLDRAIALY
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHH
PRIESFLQQGFRECAPFASSLAGLDALFDVHGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MVTPTPESILYDGMTPLERELALASFGPDGAHDPAHGAAPHAAPAADDAPRAPHNPHLAH
CCCCCCHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
WRTHLNGLATRSQRALPLRPCGRLTRAAGLVLEAIGLRLSVGAECTIELPPGSTLPHAEA
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCEEECCCEEEEECCCCCCCCCCCC
EVVGFSGDRLFLMPTTDVAGVLPGARVWPRESAPVADPLAGAKRLPVGWEMLGRVVDASG
EEEECCCCEEEEEECCHHHHCCCCCCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHCCCC
RPLDGLGPLASKVDASLSAPSINPLDREPIHSVLDVGVRAINALLTVGRGQRMGLFAGSG
CCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC
VGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVVAAPADVSPLL
CCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHH
RMQGAAYATSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKL
HHCCHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHH
PALVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRALAEAGHYPA
HHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCE
IDIEASISRAMTALIDETHLDRVRQFKQMLSRYQRNRDLIAVGAYAPGRDAQLDRAIALY
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHH
PRIESFLQQGFRECAPFASSLAGLDALFDVHGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]