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The map label for this gene is ybhP [H]

Identifier: 115353147

GI number: 115353147

Start: 3417597

End: 3418412

Strand: Direct

Name: ybhP [H]

Synonym: Bamb_3096

Alternate gene names: 115353147

Gene position: 3417597-3418412 (Clockwise)

Preceding gene: 115353146

Following gene: 115353148

Centisome position: 96.09

GC content: 70.47

Gene sequence:

>816_bases
ATGTCCGCCGACGCCCTGTCCCTGCCGTTCGCCGAACCGCACGCCGCGCCCGACGAAATCACCGCGGTCAGCTGGAACCT
GCACAAGGGCCGCTCGCCGCTCGGCTTCACCGCGTGGAATGCGATGCGCAACTGGATGCAATCGACGCACGCCGACGTGT
ATTTTCTGCAGGAAGCGATGGCGCGCCGCATGCCGCGCCCGATGCTTGCAACCGGCTTCGGCGCACCGATCGACGACGCG
GTCGACGACGTGTGGCACTGCCAGGCCACCGAGATCGCGCAGGCACTCGACTGGCAGATCGCGCTCGGGCCCAACGTGTT
CAAGCCGTCATGGCGGCACGGCAACGCGATCCTGTCGCCACATCCGCTCGACCTCGGCGGCCGCTGGGACATCTCCGCGC
ACCGGTTCGAGCGGCGCGGGCTGCTGGTCGCGCGCGCGACGCTCGCCGGCGCGCGGCCCGTCACGCTGCTGTGCGCGCAC
CTCGCGCTCACGCGCGCGGCGCGGCTGCGCCAGATGCACTGGATCGCGCACTGGATCGTGCGCAACGCGGGCGACGATCC
GCTCGTGCTCGCCGGCGACTTCAACGACTGGCGCAACGATTCGGTCGCGTTGTTCGGCGAGATCGGAATGTCCGAGGTCG
CGACGCTGCTCGGCCAGTCGGGCCGCACGTTCCCCGCGTTCTCCCCCGCGCTCGCGCTCGACAAGATGTTCGTGCGCGGG
CTGACGCCGCTCGAATGGCAGGCGCCGTCCGGCGAAACCGCTTGGCTGTCCGACCACCTGCCGTATATCGCGCGGCTGCG
GCTCGATCCGCGGTGA

Upstream 100 bases:

>100_bases
TGTCGGTCGGCGGCGAGGCCTGGACCGACTGGACGCTCGTCGAGCAGCATCCGCATCTCGTCTACCGCATGCGTGCGCGC
GTCGCGAAGGACTGAGCGCC

Downstream 100 bases:

>100_bases
TGCACCCTTGAAGCGCTGACGCCCTTGAAGCCCTGACACCGCAAGCGCGGTTGCACGGCGCGCGCTACAGTAACGCTTTG
CCCGCCTGCCACCCCGCCGC

Product: endonuclease/exonuclease/phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 270

Protein sequence:

>271_residues
MSADALSLPFAEPHAAPDEITAVSWNLHKGRSPLGFTAWNAMRNWMQSTHADVYFLQEAMARRMPRPMLATGFGAPIDDA
VDDVWHCQATEIAQALDWQIALGPNVFKPSWRHGNAILSPHPLDLGGRWDISAHRFERRGLLVARATLAGARPVTLLCAH
LALTRAARLRQMHWIAHWIVRNAGDDPLVLAGDFNDWRNDSVALFGEIGMSEVATLLGQSGRTFPAFSPALALDKMFVRG
LTPLEWQAPSGETAWLSDHLPYIARLRLDPR

Sequences:

>Translated_271_residues
MSADALSLPFAEPHAAPDEITAVSWNLHKGRSPLGFTAWNAMRNWMQSTHADVYFLQEAMARRMPRPMLATGFGAPIDDA
VDDVWHCQATEIAQALDWQIALGPNVFKPSWRHGNAILSPHPLDLGGRWDISAHRFERRGLLVARATLAGARPVTLLCAH
LALTRAARLRQMHWIAHWIVRNAGDDPLVLAGDFNDWRNDSVALFGEIGMSEVATLLGQSGRTFPAFSPALALDKMFVRG
LTPLEWQAPSGETAWLSDHLPYIARLRLDPR
>Mature_270_residues
SADALSLPFAEPHAAPDEITAVSWNLHKGRSPLGFTAWNAMRNWMQSTHADVYFLQEAMARRMPRPMLATGFGAPIDDAV
DDVWHCQATEIAQALDWQIALGPNVFKPSWRHGNAILSPHPLDLGGRWDISAHRFERRGLLVARATLAGARPVTLLCAHL
ALTRAARLRQMHWIAHWIVRNAGDDPLVLAGDFNDWRNDSVALFGEIGMSEVATLLGQSGRTFPAFSPALALDKMFVRGL
TPLEWQAPSGETAWLSDHLPYIARLRLDPR

Specific function: Unknown

COG id: COG3568

COG function: function code R; Metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787008, Length=268, Percent_Identity=30.5970149253731, Blast_Score=102, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005135 [H]

Pfam domain/function: PF03372 Exo_endo_phos [H]

EC number: NA

Molecular weight: Translated: 30105; Mature: 29974

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSADALSLPFAEPHAAPDEITAVSWNLHKGRSPLGFTAWNAMRNWMQSTHADVYFLQEAM
CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHH
ARRMPRPMLATGFGAPIDDAVDDVWHCQATEIAQALDWQIALGPNVFKPSWRHGNAILSP
HHHCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCEEEECCCCCCCCCCCCCEECCC
HPLDLGGRWDISAHRFERRGLLVARATLAGARPVTLLCAHLALTRAARLRQMHWIAHWIV
CCCCCCCEECCHHHHHHHCCEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RNAGDDPLVLAGDFNDWRNDSVALFGEIGMSEVATLLGQSGRTFPAFSPALALDKMFVRG
HCCCCCCEEEECCCCCCCCCCEEEEECCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHC
LTPLEWQAPSGETAWLSDHLPYIARLRLDPR
CCCCEEECCCCCEEEHHHCCCEEEEEECCCC
>Mature Secondary Structure 
SADALSLPFAEPHAAPDEITAVSWNLHKGRSPLGFTAWNAMRNWMQSTHADVYFLQEAM
CCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHH
ARRMPRPMLATGFGAPIDDAVDDVWHCQATEIAQALDWQIALGPNVFKPSWRHGNAILSP
HHHCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCEEEECCCCCCCCCCCCCEECCC
HPLDLGGRWDISAHRFERRGLLVARATLAGARPVTLLCAHLALTRAARLRQMHWIAHWIV
CCCCCCCEECCHHHHHHHCCEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RNAGDDPLVLAGDFNDWRNDSVALFGEIGMSEVATLLGQSGRTFPAFSPALALDKMFVRG
HCCCCCCEEEECCCCCCCCCCEEEEECCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHC
LTPLEWQAPSGETAWLSDHLPYIARLRLDPR
CCCCEEECCCCCEEEHHHCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]