Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115353077

Identifier: 115353077

GI number: 115353077

Start: 3345264

End: 3345668

Strand: Direct

Name: 115353077

Synonym: Bamb_3026

Alternate gene names: NA

Gene position: 3345264-3345668 (Clockwise)

Preceding gene: 115353076

Following gene: 115353078

Centisome position: 94.06

GC content: 64.69

Gene sequence:

>405_bases
ATGTTTTCCGCTCTCCTGCACCCCCGCCTCGCGGACTGCCGCAGGCTCTACCTGCGCGACTACGAGGTGCACATGAAGAT
CGGGGCCTTCGAACACGAGAAGCGCGGCGAGCAGCGCGTCGTCATCAACATCGACCTGTTCGTGCCGCTCGCGCTGTCCA
CCCCCGTCGACGACCGGCTGCATGAAGTCGTCGACTACGATCTGATGAAACAGAGCGTCGCGCAGTGTCTCGCGCGCGGC
CACATCCACCTGCAGGAAACGCTGTGCGACGCGATCGCCGCGAACCTGCTGGCGCACGACATCGTGCGCGCGGTACGTGT
CCGTACCGAGAAACCGGACGCCTATCCGGACTGCGACGCCGTCGGCGTCGAAGTCTTTCGCATCAAGGACGAGGAGCGCG
CATGA

Upstream 100 bases:

>100_bases
CCCGCCGCCGGCCCGAATGAATGAATTGCGCGGACCGCGGCCTGATCGCCGCCGTCCGCGCCGCTTTGCGTGCGCGCACG
CCAATTTGACTGGGACGACC

Downstream 100 bases:

>100_bases
ACGCCCCCCACACGCATGACACGGTGGCCGATGGCGCCGCCATCGAAGCCACCGTCGCCGACATCGCCGACACCGGCCGC
CGCGCGCTGACGCGCCGCGA

Product: dihydroneopterin aldolase

Products: NA

Alternate protein names: Dihydroneopterin Aldolase Protein

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MFSALLHPRLADCRRLYLRDYEVHMKIGAFEHEKRGEQRVVINIDLFVPLALSTPVDDRLHEVVDYDLMKQSVAQCLARG
HIHLQETLCDAIAANLLAHDIVRAVRVRTEKPDAYPDCDAVGVEVFRIKDEERA

Sequences:

>Translated_134_residues
MFSALLHPRLADCRRLYLRDYEVHMKIGAFEHEKRGEQRVVINIDLFVPLALSTPVDDRLHEVVDYDLMKQSVAQCLARG
HIHLQETLCDAIAANLLAHDIVRAVRVRTEKPDAYPDCDAVGVEVFRIKDEERA
>Mature_134_residues
MFSALLHPRLADCRRLYLRDYEVHMKIGAFEHEKRGEQRVVINIDLFVPLALSTPVDDRLHEVVDYDLMKQSVAQCLARG
HIHLQETLCDAIAANLLAHDIVRAVRVRTEKPDAYPDCDAVGVEVFRIKDEERA

Specific function: Unknown

COG id: COG1539

COG function: function code H; Dihydroneopterin aldolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15376; Mature: 15376

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSALLHPRLADCRRLYLRDYEVHMKIGAFEHEKRGEQRVVINIDLFVPLALSTPVDDRL
CCCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCCEEEEEEEEEEEEEECCCCHHHHH
HEVVDYDLMKQSVAQCLARGHIHLQETLCDAIAANLLAHDIVRAVRVRTEKPDAYPDCDA
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
VGVEVFRIKDEERA
CCEEEEEECCCCCC
>Mature Secondary Structure
MFSALLHPRLADCRRLYLRDYEVHMKIGAFEHEKRGEQRVVINIDLFVPLALSTPVDDRL
CCCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCCEEEEEEEEEEEEEECCCCHHHHH
HEVVDYDLMKQSVAQCLARGHIHLQETLCDAIAANLLAHDIVRAVRVRTEKPDAYPDCDA
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
VGVEVFRIKDEERA
CCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA