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The map label for this gene is 115353076

Identifier: 115353076

GI number: 115353076

Start: 3344444

End: 3345187

Strand: Direct

Name: 115353076

Synonym: Bamb_3025

Alternate gene names: NA

Gene position: 3344444-3345187 (Clockwise)

Preceding gene: 115353073

Following gene: 115353077

Centisome position: 94.04

GC content: 77.55

Gene sequence:

>744_bases
ATGACCGTTTCAGCCGATACGTCGACCCCGCGCATCGCGCTCGTCGCAGGCGCGCTGGACAGCGCGGCCGACGCCGCGTC
GCTCGGTCGTGCGCTCGCGACCGCCTTCGCGCAGCGCGGCTGGGACGTCGCGCTGCAACGCAGCGCCGGCGCGCCGCGCG
CGGCCGGCGACGCGCTCGTCGCCGAAGTCGCCGCCCGCGGCCGCCGCGCGGCCGTGCTTGACGCCGATCTGGCCCTGGAA
GCCGACGCGGGCGCGCTGGTGGCCGCTTGCGGCACGGCGCTCGGCCGGCCCGCCTGTGCGGTGTTCGTGAGCGCGTGCGC
CGGCACCGACGACGCGCAGACGGTGGATGGCGCATCGCTCGCCGGCGCGCTTGCCCGCAACGTCACAGCGCCGCTCGCAC
TGGCCCGCGCGCTCGCCGATGCGACGCCCGACGCCGCGCGCGACGACGAAACACTGCGCGCGTGCGTGATCCACGTGCTG
GACCAGGCGCTGTTTCATCCGGCGCCGGCCCGGCTGTCGCACGCGCTGATGCAGGCCGCGCTGAACCGCGCGACCGCCGC
GCTGGCGCTGGCCCTCGCGCCGAAGGTGCGTGTCGCGGCGCTCGTGCGCGGCCACGCGCCGCACGCGGACGACATCGCGG
CGGCGGCCTGCTATCTCGCGACCGCGCCCGGCGTCACGGGCGCGACGCTGACCGTCGACGGCGGCGAGCACCTGGTGCCG
CCCGCCGCCGGCCCGAATGAATGA

Upstream 100 bases:

>100_bases
CAGTTGCGCGGCGAGCGTTTCGGACTGCGCGAGCGCGTCAGGGCCGGGAGCAGGTAAACTAGCGGATTCGTGAGCTTTCG
GGTTCATCCCGGCATTGTAA

Downstream 100 bases:

>100_bases
ATTGCGCGGACCGCGGCCTGATCGCCGCCGTCCGCGCCGCTTTGCGTGCGCGCACGCCAATTTGACTGGGACGACCATGT
TTTCCGCTCTCCTGCACCCC

Product: short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MTVSADTSTPRIALVAGALDSAADAASLGRALATAFAQRGWDVALQRSAGAPRAAGDALVAEVAARGRRAAVLDADLALE
ADAGALVAACGTALGRPACAVFVSACAGTDDAQTVDGASLAGALARNVTAPLALARALADATPDAARDDETLRACVIHVL
DQALFHPAPARLSHALMQAALNRATAALALALAPKVRVAALVRGHAPHADDIAAAACYLATAPGVTGATLTVDGGEHLVP
PAAGPNE

Sequences:

>Translated_247_residues
MTVSADTSTPRIALVAGALDSAADAASLGRALATAFAQRGWDVALQRSAGAPRAAGDALVAEVAARGRRAAVLDADLALE
ADAGALVAACGTALGRPACAVFVSACAGTDDAQTVDGASLAGALARNVTAPLALARALADATPDAARDDETLRACVIHVL
DQALFHPAPARLSHALMQAALNRATAALALALAPKVRVAALVRGHAPHADDIAAAACYLATAPGVTGATLTVDGGEHLVP
PAAGPNE
>Mature_246_residues
TVSADTSTPRIALVAGALDSAADAASLGRALATAFAQRGWDVALQRSAGAPRAAGDALVAEVAARGRRAAVLDADLALEA
DAGALVAACGTALGRPACAVFVSACAGTDDAQTVDGASLAGALARNVTAPLALARALADATPDAARDDETLRACVIHVLD
QALFHPAPARLSHALMQAALNRATAALALALAPKVRVAALVRGHAPHADDIAAAACYLATAPGVTGATLTVDGGEHLVPP
AAGPNE

Specific function: Unknown

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24276; Mature: 24144

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVSADTSTPRIALVAGALDSAADAASLGRALATAFAQRGWDVALQRSAGAPRAAGDALV
CCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHH
AEVAARGRRAAVLDADLALEADAGALVAACGTALGRPACAVFVSACAGTDDAQTVDGASL
HHHHHCCCCEEEEECCCEEECCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHH
AGALARNVTAPLALARALADATPDAARDDETLRACVIHVLDQALFHPAPARLSHALMQAA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
LNRATAALALALAPKVRVAALVRGHAPHADDIAAAACYLATAPGVTGATLTVDGGEHLVP
HHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCEECC
PAAGPNE
CCCCCCC
>Mature Secondary Structure 
TVSADTSTPRIALVAGALDSAADAASLGRALATAFAQRGWDVALQRSAGAPRAAGDALV
CCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHH
AEVAARGRRAAVLDADLALEADAGALVAACGTALGRPACAVFVSACAGTDDAQTVDGASL
HHHHHCCCCEEEEECCCEEECCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHH
AGALARNVTAPLALARALADATPDAARDDETLRACVIHVLDQALFHPAPARLSHALMQAA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
LNRATAALALALAPKVRVAALVRGHAPHADDIAAAACYLATAPGVTGATLTVDGGEHLVP
HHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCEECC
PAAGPNE
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA