| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
Click here to switch to the map view.
The map label for this gene is 115353073
Identifier: 115353073
GI number: 115353073
Start: 3342551
End: 3342772
Strand: Direct
Name: 115353073
Synonym: Bamb_3022
Alternate gene names: NA
Gene position: 3342551-3342772 (Clockwise)
Preceding gene: 115353072
Following gene: 115353076
Centisome position: 93.98
GC content: 62.16
Gene sequence:
>222_bases ATGGACACGAACACGTTCACCAAAGGCATCTATACGGCCAAGGCGCATACGCAGCACACCGCCAACGGGCAATACCAGGG CTACGTGATCCTCGCCCGGGACGACGGCGACGAGACGGAGAACATGCGCTACGACGTCCACACGACGAGCCCGAGCGAGG AAGAGGCGTTCGACGAAGCGAAGGCGCTCGCGCACCGGATCCTCGGCGAGATTGAACTGTGA
Upstream 100 bases:
>100_bases AGGTGGCACGGGGCGGCGCGCTGATCGGTCGCCGATTAGCGGCGCTGTACATGCTGCGCCGCAGTGCTACGATGAAGTGT CCTATTGCGGGAGAGGCACG
Downstream 100 bases:
>100_bases TGCGCGAACTGTAATGCGCACGACCATCACGCGCGCGCCGCGGCCGGACCGCGACGCGCCGCCGCATGCGGCGCGGCTCA GAGCAGCCGCGCGACCATCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 73; Mature: 73
Protein sequence:
>73_residues MDTNTFTKGIYTAKAHTQHTANGQYQGYVILARDDGDETENMRYDVHTTSPSEEEAFDEAKALAHRILGEIEL
Sequences:
>Translated_73_residues MDTNTFTKGIYTAKAHTQHTANGQYQGYVILARDDGDETENMRYDVHTTSPSEEEAFDEAKALAHRILGEIEL >Mature_73_residues MDTNTFTKGIYTAKAHTQHTANGQYQGYVILARDDGDETENMRYDVHTTSPSEEEAFDEAKALAHRILGEIEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8218; Mature: 8218
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTNTFTKGIYTAKAHTQHTANGQYQGYVILARDDGDETENMRYDVHTTSPSEEEAFDEA CCCCCCCCCEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCHHHHHHHH KALAHRILGEIEL HHHHHHHHHCCCC >Mature Secondary Structure MDTNTFTKGIYTAKAHTQHTANGQYQGYVILARDDGDETENMRYDVHTTSPSEEEAFDEA CCCCCCCCCEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCHHHHHHHH KALAHRILGEIEL HHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA