| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is 115353053
Identifier: 115353053
GI number: 115353053
Start: 3321844
End: 3322128
Strand: Direct
Name: 115353053
Synonym: Bamb_3002
Alternate gene names: NA
Gene position: 3321844-3322128 (Clockwise)
Preceding gene: 115353049
Following gene: 115353054
Centisome position: 93.4
GC content: 73.68
Gene sequence:
>285_bases ATGCGTCGCGTTGCCCTCGTCGTCGTTCTGTGTGCCGCCACCTTCGTCGCCGCCTGCAGCGACGACGCGCCGCACGACGC GCACACGGCCGACGGCTCGCCACCGGCCGGCGCATCGTCCGGCTCCGCGAGCGCATTCAACAGCGGTGCAGGCGCGAGCG CCGCCGCATCCGATGCCGCACCGCTCGCGCCGCCTGTCGTCCACTACCCGCCCGACGATGACGACGACGCCAAGCCCGCG ACGAATGCGGGCGCGTCCGGCGTCGCCGCGTCCTCATCGCACTGA
Upstream 100 bases:
>100_bases CTTTCGCGATCACGCCCCGGTTGCAAACGATTCACCGAATCGTCGCATCGCACCGGCATACTGGAAATCGTTTCCCGATC CGCCTGCCAGGAGAGAAGTC
Downstream 100 bases:
>100_bases TCCCGCCGTTCCTGTCCCGTCCCCCGATCGCAGAACCGAGGTGAAACAACATGACGTCATCCAGCCGCCGCCGTTTCCTG CATACCGTCGCACAATCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 94; Mature: 94
Protein sequence:
>94_residues MRRVALVVVLCAATFVAACSDDAPHDAHTADGSPPAGASSGSASAFNSGAGASAAASDAAPLAPPVVHYPPDDDDDAKPA TNAGASGVAASSSH
Sequences:
>Translated_94_residues MRRVALVVVLCAATFVAACSDDAPHDAHTADGSPPAGASSGSASAFNSGAGASAAASDAAPLAPPVVHYPPDDDDDAKPA TNAGASGVAASSSH >Mature_94_residues MRRVALVVVLCAATFVAACSDDAPHDAHTADGSPPAGASSGSASAFNSGAGASAAASDAAPLAPPVVHYPPDDDDDAKPA TNAGASGVAASSSH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8870; Mature: 8870
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRVALVVVLCAATFVAACSDDAPHDAHTADGSPPAGASSGSASAFNSGAGASAAASDAA CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PLAPPVVHYPPDDDDDAKPATNAGASGVAASSSH CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRRVALVVVLCAATFVAACSDDAPHDAHTADGSPPAGASSGSASAFNSGAGASAAASDAA CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PLAPPVVHYPPDDDDDAKPATNAGASGVAASSSH CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA