Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115353030

Identifier: 115353030

GI number: 115353030

Start: 3286654

End: 3287910

Strand: Direct

Name: 115353030

Synonym: Bamb_2979

Alternate gene names: NA

Gene position: 3286654-3287910 (Clockwise)

Preceding gene: 115353029

Following gene: 115353031

Centisome position: 92.41

GC content: 69.53

Gene sequence:

>1257_bases
ATGGCGTTCAGCAAAGTATTGGTGGGATGGATGGCGGCCTGTGCGCTGTCGGCCGCTCAGGCCGGTGCGCTGCCGAACGC
AAATACCGGCGCGGCCGCAGCCGCCGGCTCGCTCGCCCATGCCGAGCGCTTCGATTACGGCGATTCGCGCCTCCCGCAAG
TTGCCGCGAACCTCAACGAACAAGTCATCAGCATTCCGGCCGATGCGTCGGGCACCGTGATGCTCGAGGCCACGCTGTTC
AAGCCGGACGGCCCCGGCCCGTTCCCGCTCGTCGTCTTCAACCACGGCAAGAACACCGGCGATCTGCATCTGCAGCCGCG
CAGCCGGCCGCTCGCGTTCGCCCGTGAATTCGTGCGCCGCGGCTATGCGGTGATCGCGCCGAACCGCCAAGGCTTCGCCG
GGTCGGGCGGCACGTACCAGCAGGAAGGCTGCAACGTCCGCAAGAACGGCCTCGCGCAGGCCGCCGACGTCGCCGCGACG
GTCCGCTACATGTCGCGTCAGTCGTACATCGATGCGTCGCGCATCGTCGTCGCCGGCACGTCGCATGGCGGCCTCGCGTC
GGTCGCGTACGGCACCGAAGCGGCGCCCGGCGTGCGCGGCATCATCAACTTCTCCGGCGGGCTGCGCCAGGATCTCTGCG
ACGGCTGGCAGCGCAATCTCGTCGAAGCATTCGACCAGTACGGCGCGCATACGGCCGTGCGCTCGCTGTGGCTGTACGGC
GACAACGATTCGGTGTGGACGCCCGCGCTCGTCGCGCAGATGCACGACGCGTACGTGTCGCACGGCACGCAGGCGCAGTT
CATCGATTTCGGCCGCTACAAGGACGACGCGCACCGGCTGATCGTCGATCGCGACGGCGTGCCCGTGTGGTGGCCGGCCG
TGCATGCGTTCCTCGCGGACCTGAGCCTGCCGACCTCGGTGCGCTATGCGGTCGCGAACCCGCACGAGCCGAATGCGACC
GGCTACGCGTCGATCGATGCGGTCGAGGCGGTGCCGTTCCTCGACGCGGCCGGCCGCGAAGGCTATCGCCGCTTCCTGAG
CCAGCATCCGAGCCGCGCGTTCGCGGTGTCCGCCGAAGGCGCGTGGTCGTGGGCCGAAGGCGGCGACGACCCGATGGCGC
TCGCGCTCGACAACTGCACGAAGCAGGGTGCGGGTGCGTGCCGGCTGTATGCGGTGAACGACCGCGTCGTGTGGAACGGC
GCGACGCAGACGGCCGACAACGGCGACGCCGATACGCACGCGCTGGCTTCGCGCTGA

Upstream 100 bases:

>100_bases
TGCCGTGTCAGACGCCGGGTAATTCCCGCATTGCACAACCTGAATTTGTCGGGCTACGATGGCCCCTCGGATCGGTCATG
TTGCATGGCAGGGCTTACGA

Downstream 100 bases:

>100_bases
TCGCGGATGGCGGATGGCGACGCCCAGGATCGGGCGGTTTCGGCATCGTCTTCTTCGCTTCTGTCCCTGCTCCCGGTAAC
TGAGCGCTCGCGCGGCGCGC

Product: dienelactone hydrolase and related enzyme-like protein

Products: NA

Alternate protein names: Signal Peptide Protein; Dipeptidyl Aminopeptidase/Acylaminoacyl-Peptidase; Dienelactone Hydrolase And Related S-Like Protein; Dienelactone Hydrolase-Like; Acylamino-Acid-Releasing; Acylaminoacyl-Peptidase; Dipeptidyl; Dienelactone Hydrolase And Related S Protein; Subfamily S9C Unassigned Peptidase; Dienelactone Hydrolase-Like Protein; Lipoprotein

Number of amino acids: Translated: 418; Mature: 417

Protein sequence:

>418_residues
MAFSKVLVGWMAACALSAAQAGALPNANTGAAAAAGSLAHAERFDYGDSRLPQVAANLNEQVISIPADASGTVMLEATLF
KPDGPGPFPLVVFNHGKNTGDLHLQPRSRPLAFAREFVRRGYAVIAPNRQGFAGSGGTYQQEGCNVRKNGLAQAADVAAT
VRYMSRQSYIDASRIVVAGTSHGGLASVAYGTEAAPGVRGIINFSGGLRQDLCDGWQRNLVEAFDQYGAHTAVRSLWLYG
DNDSVWTPALVAQMHDAYVSHGTQAQFIDFGRYKDDAHRLIVDRDGVPVWWPAVHAFLADLSLPTSVRYAVANPHEPNAT
GYASIDAVEAVPFLDAAGREGYRRFLSQHPSRAFAVSAEGAWSWAEGGDDPMALALDNCTKQGAGACRLYAVNDRVVWNG
ATQTADNGDADTHALASR

Sequences:

>Translated_418_residues
MAFSKVLVGWMAACALSAAQAGALPNANTGAAAAAGSLAHAERFDYGDSRLPQVAANLNEQVISIPADASGTVMLEATLF
KPDGPGPFPLVVFNHGKNTGDLHLQPRSRPLAFAREFVRRGYAVIAPNRQGFAGSGGTYQQEGCNVRKNGLAQAADVAAT
VRYMSRQSYIDASRIVVAGTSHGGLASVAYGTEAAPGVRGIINFSGGLRQDLCDGWQRNLVEAFDQYGAHTAVRSLWLYG
DNDSVWTPALVAQMHDAYVSHGTQAQFIDFGRYKDDAHRLIVDRDGVPVWWPAVHAFLADLSLPTSVRYAVANPHEPNAT
GYASIDAVEAVPFLDAAGREGYRRFLSQHPSRAFAVSAEGAWSWAEGGDDPMALALDNCTKQGAGACRLYAVNDRVVWNG
ATQTADNGDADTHALASR
>Mature_417_residues
AFSKVLVGWMAACALSAAQAGALPNANTGAAAAAGSLAHAERFDYGDSRLPQVAANLNEQVISIPADASGTVMLEATLFK
PDGPGPFPLVVFNHGKNTGDLHLQPRSRPLAFAREFVRRGYAVIAPNRQGFAGSGGTYQQEGCNVRKNGLAQAADVAATV
RYMSRQSYIDASRIVVAGTSHGGLASVAYGTEAAPGVRGIINFSGGLRQDLCDGWQRNLVEAFDQYGAHTAVRSLWLYGD
NDSVWTPALVAQMHDAYVSHGTQAQFIDFGRYKDDAHRLIVDRDGVPVWWPAVHAFLADLSLPTSVRYAVANPHEPNATG
YASIDAVEAVPFLDAAGREGYRRFLSQHPSRAFAVSAEGAWSWAEGGDDPMALALDNCTKQGAGACRLYAVNDRVVWNGA
TQTADNGDADTHALASR

Specific function: Unknown

COG id: COG0412

COG function: function code Q; Dienelactone hydrolase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44422; Mature: 44291

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFSKVLVGWMAACALSAAQAGALPNANTGAAAAAGSLAHAERFDYGDSRLPQVAANLNE
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCC
QVISIPADASGTVMLEATLFKPDGPGPFPLVVFNHGKNTGDLHLQPRSRPLAFAREFVRR
EEEEECCCCCCEEEEEEEEECCCCCCCCEEEEEECCCCCCEEEECCCCCHHHHHHHHHHC
GYAVIAPNRQGFAGSGGTYQQEGCNVRKNGLAQAADVAATVRYMSRQSYIDASRIVVAGT
CEEEECCCCCCCCCCCCCCHHCCCCCCHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEC
SHGGLASVAYGTEAAPGVRGIINFSGGLRQDLCDGWQRNLVEAFDQYGAHTAVRSLWLYG
CCCCEEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHEEEEEC
DNDSVWTPALVAQMHDAYVSHGTQAQFIDFGRYKDDAHRLIVDRDGVPVWWPAVHAFLAD
CCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHHH
LSLPTSVRYAVANPHEPNATGYASIDAVEAVPFLDAAGREGYRRFLSQHPSRAFAVSAEG
CCCCCCEEEEECCCCCCCCCCCEECCHHHHCCCHHHCCHHHHHHHHHHCCCCEEEEECCC
AWSWAEGGDDPMALALDNCTKQGAGACRLYAVNDRVVWNGATQTADNGDADTHALASR
CEECCCCCCCCEEEEECHHCCCCCCEEEEEEECCEEEECCCCCCCCCCCCCHHHHCCC
>Mature Secondary Structure 
AFSKVLVGWMAACALSAAQAGALPNANTGAAAAAGSLAHAERFDYGDSRLPQVAANLNE
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCC
QVISIPADASGTVMLEATLFKPDGPGPFPLVVFNHGKNTGDLHLQPRSRPLAFAREFVRR
EEEEECCCCCCEEEEEEEEECCCCCCCCEEEEEECCCCCCEEEECCCCCHHHHHHHHHHC
GYAVIAPNRQGFAGSGGTYQQEGCNVRKNGLAQAADVAATVRYMSRQSYIDASRIVVAGT
CEEEECCCCCCCCCCCCCCHHCCCCCCHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEC
SHGGLASVAYGTEAAPGVRGIINFSGGLRQDLCDGWQRNLVEAFDQYGAHTAVRSLWLYG
CCCCEEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHEEEEEC
DNDSVWTPALVAQMHDAYVSHGTQAQFIDFGRYKDDAHRLIVDRDGVPVWWPAVHAFLAD
CCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHHH
LSLPTSVRYAVANPHEPNATGYASIDAVEAVPFLDAAGREGYRRFLSQHPSRAFAVSAEG
CCCCCCEEEEECCCCCCCCCCCEECCHHHHCCCHHHCCHHHHHHHHHHCCCCEEEEECCC
AWSWAEGGDDPMALALDNCTKQGAGACRLYAVNDRVVWNGATQTADNGDADTHALASR
CEECCCCCCCCEEEEECHHCCCCCCEEEEEEECCEEEECCCCCCCCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA