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The map label for this gene is ychJ [C]

Identifier: 115353029

GI number: 115353029

Start: 3286108

End: 3286545

Strand: Direct

Name: ychJ [C]

Synonym: Bamb_2978

Alternate gene names: 115353029

Gene position: 3286108-3286545 (Clockwise)

Preceding gene: 115353028

Following gene: 115353030

Centisome position: 92.4

GC content: 70.78

Gene sequence:

>438_bases
ATGAATTTGAACCGACCTGACGCGTGCCCGTGCGGCGGCGCGTCCCCCACTCCCGCCGGCAAAGCCCCGGCGCCGCGCTA
TGCGGCGTGCTGCGGGCGCTTCATCGACGGCGGCGAAGCCGCGCCCACCGCGCTCGAGTTGATGCGCTCGCGGTACACTG
CGTACGTGCTCGGCGCGACCGACTACCTGCGCGCGACCTGGGACGCACGCACCTGCCCGGCCGATCTCGATGCCGACCCG
AATGCGCCCGACGCGCCGCGCTGGCTCGGCTTGGCGGTCAAACGCCACGCGCTGCTGGACGAACGGCACGCGGAGGTCGA
GTTCGTGGCCCGCTACAAGGTCGGCGGGCGCGCGTACCGGCTCCACGAGACGAGTCGCTTCGCCCGCGACGAGCACGGTT
TCTGGCGTTATGTCGACGGCGAAGTAAGTGAACGCTGA

Upstream 100 bases:

>100_bases
GGACGTGTCCCGCGCCAACGGCCGTTTCTTCCAGTACGACGGCGTCGAGCTCAGTTGGTGAGCCGGCATGACAACCCGGC
GTCGTTAATTCACGATTCGC

Downstream 100 bases:

>100_bases
CAAATAGTTGCCGTGTCAGACGCCGGGTAATTCCCGCATTGCACAACCTGAATTTGTCGGGCTACGATGGCCCCTCGGAT
CGGTCATGTTGCATGGCAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MNLNRPDACPCGGASPTPAGKAPAPRYAACCGRFIDGGEAAPTALELMRSRYTAYVLGATDYLRATWDARTCPADLDADP
NAPDAPRWLGLAVKRHALLDERHAEVEFVARYKVGGRAYRLHETSRFARDEHGFWRYVDGEVSER

Sequences:

>Translated_145_residues
MNLNRPDACPCGGASPTPAGKAPAPRYAACCGRFIDGGEAAPTALELMRSRYTAYVLGATDYLRATWDARTCPADLDADP
NAPDAPRWLGLAVKRHALLDERHAEVEFVARYKVGGRAYRLHETSRFARDEHGFWRYVDGEVSER
>Mature_145_residues
MNLNRPDACPCGGASPTPAGKAPAPRYAACCGRFIDGGEAAPTALELMRSRYTAYVLGATDYLRATWDARTCPADLDADP
NAPDAPRWLGLAVKRHALLDERHAEVEFVARYKVGGRAYRLHETSRFARDEHGFWRYVDGEVSER

Specific function: Unknown

COG id: COG3012

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0225 family [H]

Homologues:

Organism=Escherichia coli, GI1787484, Length=134, Percent_Identity=39.5522388059701, Blast_Score=80, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006521
- InterPro:   IPR023006 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16011; Mature: 16011

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLNRPDACPCGGASPTPAGKAPAPRYAACCGRFIDGGEAAPTALELMRSRYTAYVLGAT
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCEEEEECCH
DYLRATWDARTCPADLDADPNAPDAPRWLGLAVKRHALLDERHAEVEFVARYKVGGRAYR
HHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEE
LHETSRFARDEHGFWRYVDGEVSER
ECHHHHHHCCCCCEEEEECCCCCCC
>Mature Secondary Structure
MNLNRPDACPCGGASPTPAGKAPAPRYAACCGRFIDGGEAAPTALELMRSRYTAYVLGAT
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCEEEEECCH
DYLRATWDARTCPADLDADPNAPDAPRWLGLAVKRHALLDERHAEVEFVARYKVGGRAYR
HHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEE
LHETSRFARDEHGFWRYVDGEVSER
ECHHHHHHCCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA