| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is coaX [H]
Identifier: 115353005
GI number: 115353005
Start: 3257825
End: 3258613
Strand: Direct
Name: coaX [H]
Synonym: Bamb_2954
Alternate gene names: 115353005
Gene position: 3257825-3258613 (Clockwise)
Preceding gene: 115353004
Following gene: 115353006
Centisome position: 91.6
GC content: 73.0
Gene sequence:
>789_bases ATGAACGACCCGCATCTGCTGATCGACGCCGGCAACAGCCGGATCAAGTGGGCGCTCGCCGATGCGCGGCGCACGCTCGT CGACACGGGCGCGTTCGGCCATACGCGCGACGGCGGCGCCGATCCCGACTGGTCGGCCCTGCCGCGTCCCCATGGCGCAT GGATCTCGAACGTCGCGGGCGCCGACGTGGCCGCACGGCTCGACGCGCTGCTCGACGCATGCTGGCCGGGCCTGCCGCGC ACGACGATCCGCTCGCAACCCGCGCAATGCGGCGTGACGAACGGCTACACGACGCCCGACCAGCTCGGCAGCGATCGCTG GGCCGGCTTGATCGGCGCACGTGCGGCGTTTCCGGGCGAGCATCTGTTGATCGCGACATTCGGCACGGCGACGACGCTCG AAGCGCTGCGCGCGGACGGTCGCTTCACCGGCGGGCTGATCGCGCCGGGCTGGGCGCTGATGATGCGCGCGCTCGGCACG CACACCGCGCAGTTGCCGACGCTGACCACCGACATCGCGAGCGGGCTGCTCGCCGGCGCGCAGGCCGAGCCGTTCCAGGT CGATACGCCGCGCTCGCTGTCGGCGGGTTGCCTGTACGCGCAGGCCGGGCTGATCGAACGCGCATGGCGCGATCTCGCCG ATGCGTGGCAGGCGCCCGTGCGGCTGGTGCTGGCAGGCGGCGCGGCGGACGACGTCGCGCGCGCGCTGACGCTGCCGCAT ACGCGGCACGACGCGCTGATCCTGTCGGGCCTTGCGTTGATCGCCGCGGAAGGGGCGGCGCAGGATTGA
Upstream 100 bases:
>100_bases GCGTCGCGACGGGCATCGACGCGACCGGCCAGTTGCTGCTCGACACGCCCGACGGCGTGCTGGCGATCGCGGCCGGCGAC GTATCGCTGCGCGAAGCGCA
Downstream 100 bases:
>100_bases CGGAAACCGGCCGGCATCGCGCCGACCGCGTCGACGGATGCCCGGCTGCGTTGCTTCGTCACGGGAAGGATGGAAGAACG GGCGCGGTGTGTGCGCCCAT
Product: pantothenate kinase
Products: NA
Alternate protein names: PanK-III; Pantothenic acid kinase [H]
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MNDPHLLIDAGNSRIKWALADARRTLVDTGAFGHTRDGGADPDWSALPRPHGAWISNVAGADVAARLDALLDACWPGLPR TTIRSQPAQCGVTNGYTTPDQLGSDRWAGLIGARAAFPGEHLLIATFGTATTLEALRADGRFTGGLIAPGWALMMRALGT HTAQLPTLTTDIASGLLAGAQAEPFQVDTPRSLSAGCLYAQAGLIERAWRDLADAWQAPVRLVLAGGAADDVARALTLPH TRHDALILSGLALIAAEGAAQD
Sequences:
>Translated_262_residues MNDPHLLIDAGNSRIKWALADARRTLVDTGAFGHTRDGGADPDWSALPRPHGAWISNVAGADVAARLDALLDACWPGLPR TTIRSQPAQCGVTNGYTTPDQLGSDRWAGLIGARAAFPGEHLLIATFGTATTLEALRADGRFTGGLIAPGWALMMRALGT HTAQLPTLTTDIASGLLAGAQAEPFQVDTPRSLSAGCLYAQAGLIERAWRDLADAWQAPVRLVLAGGAADDVARALTLPH TRHDALILSGLALIAAEGAAQD >Mature_262_residues MNDPHLLIDAGNSRIKWALADARRTLVDTGAFGHTRDGGADPDWSALPRPHGAWISNVAGADVAARLDALLDACWPGLPR TTIRSQPAQCGVTNGYTTPDQLGSDRWAGLIGARAAFPGEHLLIATFGTATTLEALRADGRFTGGLIAPGWALMMRALGT HTAQLPTLTTDIASGLLAGAQAEPFQVDTPRSLSAGCLYAQAGLIERAWRDLADAWQAPVRLVLAGGAADDVARALTLPH TRHDALILSGLALIAAEGAAQD
Specific function: Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis [H]
COG id: COG1521
COG function: function code K; Putative transcriptional regulator, homolog of Bvg accessory factor
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the type III pantothenate kinase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004619 [H]
Pfam domain/function: PF03309 Bvg_acc_factor [H]
EC number: =2.7.1.33 [H]
Molecular weight: Translated: 27330; Mature: 27330
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDPHLLIDAGNSRIKWALADARRTLVDTGAFGHTRDGGADPDWSALPRPHGAWISNVAG CCCCEEEEECCCCEEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCC ADVAARLDALLDACWPGLPRTTIRSQPAQCGVTNGYTTPDQLGSDRWAGLIGARAAFPGE CHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHCCCCC HLLIATFGTATTLEALRADGRFTGGLIAPGWALMMRALGTHTAQLPTLTTDIASGLLAGA EEEEEECCCHHHHHHHHCCCCCCCCEECCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCC QAEPFQVDTPRSLSAGCLYAQAGLIERAWRDLADAWQAPVRLVLAGGAADDVARALTLPH CCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCHHHHHHHHHCCC TRHDALILSGLALIAAEGAAQD CCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNDPHLLIDAGNSRIKWALADARRTLVDTGAFGHTRDGGADPDWSALPRPHGAWISNVAG CCCCEEEEECCCCEEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCC ADVAARLDALLDACWPGLPRTTIRSQPAQCGVTNGYTTPDQLGSDRWAGLIGARAAFPGE CHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHCCCCC HLLIATFGTATTLEALRADGRFTGGLIAPGWALMMRALGTHTAQLPTLTTDIASGLLAGA EEEEEECCCHHHHHHHHCCCCCCCCEECCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCC QAEPFQVDTPRSLSAGCLYAQAGLIERAWRDLADAWQAPVRLVLAGGAADDVARALTLPH CCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCHHHHHHHHHCCC TRHDALILSGLALIAAEGAAQD CCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA