Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115353006

Identifier: 115353006

GI number: 115353006

Start: 3258848

End: 3259090

Strand: Direct

Name: 115353006

Synonym: Bamb_2955

Alternate gene names: NA

Gene position: 3258848-3259090 (Clockwise)

Preceding gene: 115353005

Following gene: 115353013

Centisome position: 91.63

GC content: 74.49

Gene sequence:

>243_bases
ATGCTGCGCTGGCTGATCGCTGTTCTCTTTCTCGCGAACCTGCTCGCGTTCGTGGCGGTGCGCGGCGTGTTCGGGCCGCC
GCCGGCGGCCGGCGCGCGCGAACCGGGCGTGCTGTCCCGGCAGGTGCGGCCCGATGCAGTGCATGCGATGCCGCTCGCGC
AGGCGACCGATCAGCCCGTGATCGGCGCTCCGATCGCCGCGCCGGCTCTCACGGAGGCGCCGCTCGCGGCATCCGCGCCC
TGA

Upstream 100 bases:

>100_bases
GCGAACGATGGCCGGCTGCAACGGCAACCTTTGCCATGCAGCAGGCCCGACTGAACGGTTGAACGACTGAACGACTGAAC
CACGACGAGGAGTGTCGACG

Downstream 100 bases:

>100_bases
CGGCGCGGCGTACGCATCAGGACTGCTGCGCGCGCACCTTCTTCAGCAGCGCGGTGGTCGAGCGGTCATGCGCGAACGGA
ATCGCGAGCGCACGGCCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 80; Mature: 80

Protein sequence:

>80_residues
MLRWLIAVLFLANLLAFVAVRGVFGPPPAAGAREPGVLSRQVRPDAVHAMPLAQATDQPVIGAPIAAPALTEAPLAASAP

Sequences:

>Translated_80_residues
MLRWLIAVLFLANLLAFVAVRGVFGPPPAAGAREPGVLSRQVRPDAVHAMPLAQATDQPVIGAPIAAPALTEAPLAASAP
>Mature_80_residues
MLRWLIAVLFLANLLAFVAVRGVFGPPPAAGAREPGVLSRQVRPDAVHAMPLAQATDQPVIGAPIAAPALTEAPLAASAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8158; Mature: 8158

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRWLIAVLFLANLLAFVAVRGVFGPPPAAGAREPGVLSRQVRPDAVHAMPLAQATDQPV
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCC
IGAPIAAPALTEAPLAASAP
CCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLRWLIAVLFLANLLAFVAVRGVFGPPPAAGAREPGVLSRQVRPDAVHAMPLAQATDQPV
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCC
IGAPIAAPALTEAPLAASAP
CCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA