| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is hisC2 [H]
Identifier: 115352916
GI number: 115352916
Start: 3159078
End: 3160145
Strand: Direct
Name: hisC2 [H]
Synonym: Bamb_2865
Alternate gene names: 115352916
Gene position: 3159078-3160145 (Clockwise)
Preceding gene: 115352915
Following gene: 115352920
Centisome position: 88.82
GC content: 66.85
Gene sequence:
>1068_bases GTGAGCCGTTACTGGAGCGACCTCGTTCAGCAACTCGTGCCTTACGTGCCGGGCGAACAGCCCGCACTCGCACACCCCGT CAAGCTGAACACCAACGAGAATCCCTATCCGCCTTCGCCGCGCGTCGTCGCGGCGATCGCACGCGAACTCGGCGACACCG GCGACACGCTGCGCCGCTATCCCGATCCGCTCGCGCGCGCACTGCGCGAGACGGTCGCGGCCCATCACCGCATCAAGCCC GAACAGGTCTTCGTCGGCAACGGCTCCGATGAAGTGCTCGCGCATGCATTCCAGGCACTGCTCAAGCATGACCGGCCGCT GCGCTTTCCCGACATCTCGTACAGCTTCTATCCGACCTACGCGCGCCTGTACGGCGTCGAGACCACGGTCGTGCCGCTCG CGGACGACTTCTCGATCCGTGTCGAGGATTACCTCGACGACGCGGGCGGCGTGCTGTTTCCGAACCCGAACGCGCCGACC GGGCGCGCGCTGCCGCTCGCGGACATCGAACGGATCGCGGCCGCGAACCCGTCGTCGGTCGTGCTGATCGACGAAGCGTA TGTCGATTTCGGCGCGCAATCCGCGATCACGCTGATCGACCGCTATCCGAACCTGCTCGTCGTGCACACGACGTCGAAGG CGCGCTCGCTCGCGGGCATGCGCGTCGGTTTCGCGTTCGGCGATGCGGCGCTGATCAACGCGCTCAATCGCGTAAAAGAC AGCTTCAACTCGTATCCGCTCGACCGGCTCGCGCAGGCCGCCGCCCAGGCCGCATACGAAGACACCGACTATTTCAACGC GACCTGCCGGCGTGTGATCGACACGCGTGCGCGGCTCACGCACGCGCTCGAGGCGCTCGGCTTCGACGTCGTGCCGTCGG CCGCGAATTTCGTGTTCGCGCGCCACCCCGCGCACGATGCGGGCGCGATCGCGGCAAAGCTGAAGGATCGGGAAATTTTC GTGCGGCACTTCCGCGCGCCGCGCATCGACCAGCACTTGCGCATCACCGTCGGCACCGACGCGGAATGCGACGCGCTCGT CGCGGCGTTGCGCGAACTGATCGGCTGA
Upstream 100 bases:
>100_bases CCGTGCGGCGGCGCCGGGCGGCCTCCCGGTCCTGTGCAATTGCGCACCCCGTCGCGCACATGCGGTAATCTGGTCGTTTT TGCCCGTCAGGAGCCAAGCG
Downstream 100 bases:
>100_bases AGCACAAGCGGGAAGCGGAACCGGCGCCGAGAGGCGCCGGTCGAGGAAATCGTGACGTCGTGACGCACGCGTCACGACGG AGTCACTGCGGGGTCACGCT
Product: histidinol-phosphate aminotransferase
Products: NA
Alternate protein names: Imidazole acetol-phosphate transaminase 2 [H]
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MSRYWSDLVQQLVPYVPGEQPALAHPVKLNTNENPYPPSPRVVAAIARELGDTGDTLRRYPDPLARALRETVAAHHRIKP EQVFVGNGSDEVLAHAFQALLKHDRPLRFPDISYSFYPTYARLYGVETTVVPLADDFSIRVEDYLDDAGGVLFPNPNAPT GRALPLADIERIAAANPSSVVLIDEAYVDFGAQSAITLIDRYPNLLVVHTTSKARSLAGMRVGFAFGDAALINALNRVKD SFNSYPLDRLAQAAAQAAYEDTDYFNATCRRVIDTRARLTHALEALGFDVVPSAANFVFARHPAHDAGAIAAKLKDREIF VRHFRAPRIDQHLRITVGTDAECDALVAALRELIG
Sequences:
>Translated_355_residues MSRYWSDLVQQLVPYVPGEQPALAHPVKLNTNENPYPPSPRVVAAIARELGDTGDTLRRYPDPLARALRETVAAHHRIKP EQVFVGNGSDEVLAHAFQALLKHDRPLRFPDISYSFYPTYARLYGVETTVVPLADDFSIRVEDYLDDAGGVLFPNPNAPT GRALPLADIERIAAANPSSVVLIDEAYVDFGAQSAITLIDRYPNLLVVHTTSKARSLAGMRVGFAFGDAALINALNRVKD SFNSYPLDRLAQAAAQAAYEDTDYFNATCRRVIDTRARLTHALEALGFDVVPSAANFVFARHPAHDAGAIAAKLKDREIF VRHFRAPRIDQHLRITVGTDAECDALVAALRELIG >Mature_354_residues SRYWSDLVQQLVPYVPGEQPALAHPVKLNTNENPYPPSPRVVAAIARELGDTGDTLRRYPDPLARALRETVAAHHRIKPE QVFVGNGSDEVLAHAFQALLKHDRPLRFPDISYSFYPTYARLYGVETTVVPLADDFSIRVEDYLDDAGGVLFPNPNAPTG RALPLADIERIAAANPSSVVLIDEAYVDFGAQSAITLIDRYPNLLVVHTTSKARSLAGMRVGFAFGDAALINALNRVKDS FNSYPLDRLAQAAAQAAYEDTDYFNATCRRVIDTRARLTHALEALGFDVVPSAANFVFARHPAHDAGAIAAKLKDREIFV RHFRAPRIDQHLRITVGTDAECDALVAALRELIG
Specific function: Histidine biosynthesis; seventh step. [C]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788332, Length=355, Percent_Identity=31.830985915493, Blast_Score=134, Evalue=1e-32, Organism=Escherichia coli, GI1788722, Length=242, Percent_Identity=29.3388429752066, Blast_Score=68, Evalue=7e-13, Organism=Saccharomyces cerevisiae, GI6322075, Length=363, Percent_Identity=28.6501377410468, Blast_Score=110, Evalue=3e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.6.1.9 [H]
Molecular weight: Translated: 39036; Mature: 38904
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: PS00639 THIOL_PROTEASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRYWSDLVQQLVPYVPGEQPALAHPVKLNTNENPYPPSPRVVAAIARELGDTGDTLRRY CCHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCHHHHHHC PDPLARALRETVAAHHRIKPEQVFVGNGSDEVLAHAFQALLKHDRPLRFPDISYSFYPTY CCHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCEECCHH ARLYGVETTVVPLADDFSIRVEDYLDDAGGVLFPNPNAPTGRALPLADIERIAAANPSSV HHHHCCCEEEEEECCCCEEEHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHHHCCCCCCE VLIDEAYVDFGAQSAITLIDRYPNLLVVHTTSKARSLAGMRVGFAFGDAALINALNRVKD EEEEHHHHCCCCHHHHHHHHCCCCEEEEEECHHHHHHHHHEEEHHHHHHHHHHHHHHHHH SFNSYPLDRLAQAAAQAAYEDTDYFNATCRRVIDTRARLTHALEALGFDVVPSAANFVFA HHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE RHPAHDAGAIAAKLKDREIFVRHFRAPRIDQHLRITVGTDAECDALVAALRELIG ECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHC >Mature Secondary Structure SRYWSDLVQQLVPYVPGEQPALAHPVKLNTNENPYPPSPRVVAAIARELGDTGDTLRRY CHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCHHHHHHC PDPLARALRETVAAHHRIKPEQVFVGNGSDEVLAHAFQALLKHDRPLRFPDISYSFYPTY CCHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCEECCHH ARLYGVETTVVPLADDFSIRVEDYLDDAGGVLFPNPNAPTGRALPLADIERIAAANPSSV HHHHCCCEEEEEECCCCEEEHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHHHCCCCCCE VLIDEAYVDFGAQSAITLIDRYPNLLVVHTTSKARSLAGMRVGFAFGDAALINALNRVKD EEEEHHHHCCCCHHHHHHHHCCCCEEEEEECHHHHHHHHHEEEHHHHHHHHHHHHHHHHH SFNSYPLDRLAQAAAQAAYEDTDYFNATCRRVIDTRARLTHALEALGFDVVPSAANFVFA HHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE RHPAHDAGAIAAKLKDREIFVRHFRAPRIDQHLRITVGTDAECDALVAALRELIG ECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA