Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115352899

Identifier: 115352899

GI number: 115352899

Start: 3143052

End: 3143666

Strand: Direct

Name: 115352899

Synonym: Bamb_2848

Alternate gene names: NA

Gene position: 3143052-3143666 (Clockwise)

Preceding gene: 115352898

Following gene: 115352900

Centisome position: 88.37

GC content: 65.85

Gene sequence:

>615_bases
ATGAACACGCATTTCCGCTGGACCCAGTTGCTGCCGCTGATCGCGGTCGCCGCGCTCGCGGGCATCACGTGGTGGCTGCT
GCAGGCGACGCTGCCGCCGCCCGGCGAAGGCGCCGCGCAGCCGAAGCGCCATACGCCCGACTATTTCGCGGACAACTTCT
CGGTCACCGAGCTCGACCAGTCGGGCACGACCCAGTACCGGCTCACGGCCGCGAAGCTGGTCCACTATGAAGACACCGAC
AACAGCGACCTGACCGCTCCGGCCATGCGCGCATTCCAGCCCGGCAAGCCGGTCGTCACGACCACCGCGAAGCGCGGCAC
CGTCAACGGCGACGTGTCGATCGTCGACTTGTACGACGACGCGCGCATCCTGCGCGTGGCCGGCGGCGGCGATCCGCAGA
TGCAGGCCGATTCCCAGCATTTCCGGATCTTGGTCAATGACGATGTGATCCAGACCGAAAAGCCGGTTAAACTTCAGCGC
GGCCTGTCGCTCGTCAACGCGACCGACGGCATGAAGTACAACAACGTCACCCGGGTCATCGAGCTTTACGGCAACGTGCG
CGGCACGATCGCCGCGGCGGACACGTCCGGCGGCTCGAAAGGTCAATCCAGGTGA

Upstream 100 bases:

>100_bases
CCGCGGCGGCCACGGCGCGGTGCGTGAAGTGTGCGACGCAATCCTGCGCGCGCAGCGCCGCTACGACGCGCTGCTCGCGG
CTGCCTGCGGAGCCTGACGG

Downstream 100 bases:

>100_bases
CGCATCCCTCACGTGACTGCATGAACGAACCGTTCCCTCGACAGAATTCCGGCGGCGCTGCGCGCGCCGTCCGCGCCGCG
CTCGCCGCGACGCTCGTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: Exported Protein

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MNTHFRWTQLLPLIAVAALAGITWWLLQATLPPPGEGAAQPKRHTPDYFADNFSVTELDQSGTTQYRLTAAKLVHYEDTD
NSDLTAPAMRAFQPGKPVVTTTAKRGTVNGDVSIVDLYDDARILRVAGGGDPQMQADSQHFRILVNDDVIQTEKPVKLQR
GLSLVNATDGMKYNNVTRVIELYGNVRGTIAAADTSGGSKGQSR

Sequences:

>Translated_204_residues
MNTHFRWTQLLPLIAVAALAGITWWLLQATLPPPGEGAAQPKRHTPDYFADNFSVTELDQSGTTQYRLTAAKLVHYEDTD
NSDLTAPAMRAFQPGKPVVTTTAKRGTVNGDVSIVDLYDDARILRVAGGGDPQMQADSQHFRILVNDDVIQTEKPVKLQR
GLSLVNATDGMKYNNVTRVIELYGNVRGTIAAADTSGGSKGQSR
>Mature_204_residues
MNTHFRWTQLLPLIAVAALAGITWWLLQATLPPPGEGAAQPKRHTPDYFADNFSVTELDQSGTTQYRLTAAKLVHYEDTD
NSDLTAPAMRAFQPGKPVVTTTAKRGTVNGDVSIVDLYDDARILRVAGGGDPQMQADSQHFRILVNDDVIQTEKPVKLQR
GLSLVNATDGMKYNNVTRVIELYGNVRGTIAAADTSGGSKGQSR

Specific function: Unknown

COG id: COG3117

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22181; Mature: 22181

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTHFRWTQLLPLIAVAALAGITWWLLQATLPPPGEGAAQPKRHTPDYFADNFSVTELDQ
CCCCCHHHHHHHHHHHHHHHHHHHEEHEECCCCCCCCCCCCCCCCCCHHCCCCEEEEECC
SGTTQYRLTAAKLVHYEDTDNSDLTAPAMRAFQPGKPVVTTTAKRGTVNGDVSIVDLYDD
CCCCEEEEEEEEEEEECCCCCCCCCHHHHHHCCCCCCEEEECCCCCCCCCCEEEEEEECC
ARILRVAGGGDPQMQADSQHFRILVNDDVIQTEKPVKLQRGLSLVNATDGMKYNNVTRVI
CEEEEEECCCCCCCCCCCCEEEEEECCCEECCCCCHHHHHCCEEEECCCCCEECHHHHHH
ELYGNVRGTIAAADTSGGSKGQSR
HHHCCCCEEEEEECCCCCCCCCCC
>Mature Secondary Structure
MNTHFRWTQLLPLIAVAALAGITWWLLQATLPPPGEGAAQPKRHTPDYFADNFSVTELDQ
CCCCCHHHHHHHHHHHHHHHHHHHEEHEECCCCCCCCCCCCCCCCCCHHCCCCEEEEECC
SGTTQYRLTAAKLVHYEDTDNSDLTAPAMRAFQPGKPVVTTTAKRGTVNGDVSIVDLYDD
CCCCEEEEEEEEEEEECCCCCCCCCHHHHHHCCCCCCEEEECCCCCCCCCCEEEEEEECC
ARILRVAGGGDPQMQADSQHFRILVNDDVIQTEKPVKLQRGLSLVNATDGMKYNNVTRVI
CEEEEEECCCCCCCCCCCCEEEEEECCCEECCCCCHHHHHCCEEEECCCCCEECHHHHHH
ELYGNVRGTIAAADTSGGSKGQSR
HHHCCCCEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA