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The map label for this gene is kdsC [H]

Identifier: 115352898

GI number: 115352898

Start: 3142512

End: 3143048

Strand: Direct

Name: kdsC [H]

Synonym: Bamb_2847

Alternate gene names: 115352898

Gene position: 3142512-3143048 (Clockwise)

Preceding gene: 115352897

Following gene: 115352899

Centisome position: 88.36

GC content: 70.58

Gene sequence:

>537_bases
ATGAGCGCAGCGCTGACTGCGGCCGAACGCGCGAGCCGCGTGAAGCTGATGATTTTCGACGTCGACGGTGTGCTGACCGA
CGGCGGCCTGCTGTTTACCGCGGCCGGCGACGCGATGAAGTCGTTCAATTCGCTCGACGGCCATGGCGTGAAGCTGCTCG
GCGAGGCCGGCATCGCGACCGCGATCATCACCGGCCGCAACTCCGAGATCGTCGCGGCGCGCGCGAAGGAAATGAAGATC
GCGCACCTGTTCCAGGGTGTCGAGAACAAGCTCGCCGTGTTCGCCGAGCTGACCGCGTCGCTCGACATCGGCGCCGACGC
ATGCGGCTACATGGGCGACGACTGGCCCGACCTGCCGGTGCTGCTGCGCTGCGGCTTCGCGGCCGCGCCGGCCAACGCGC
ACCCCGAGGTGATCGCCCGCGCGCACTGGGTGGCCGAGGCCCGCGGCGGCCACGGCGCGGTGCGTGAAGTGTGCGACGCA
ATCCTGCGCGCGCAGCGCCGCTACGACGCGCTGCTCGCGGCTGCCTGCGGAGCCTGA

Upstream 100 bases:

>100_bases
TGGAGCGCCACCGGATCAACCAGATGCTGGTGGTCGATGCCCACGGCGCGCTGATCGGCGCGCTGAACATGCACGACCTG
TTTTCGAAGAAGGTGATCTG

Downstream 100 bases:

>100_bases
CGGATGAACACGCATTTCCGCTGGACCCAGTTGCTGCCGCTGATCGCGGTCGCCGCGCTCGCGGGCATCACGTGGTGGCT
GCTGCAGGCGACGCTGCCGC

Product: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase

Products: NA

Alternate protein names: KDO 8-P phosphatase [H]

Number of amino acids: Translated: 178; Mature: 177

Protein sequence:

>178_residues
MSAALTAAERASRVKLMIFDVDGVLTDGGLLFTAAGDAMKSFNSLDGHGVKLLGEAGIATAIITGRNSEIVAARAKEMKI
AHLFQGVENKLAVFAELTASLDIGADACGYMGDDWPDLPVLLRCGFAAAPANAHPEVIARAHWVAEARGGHGAVREVCDA
ILRAQRRYDALLAAACGA

Sequences:

>Translated_178_residues
MSAALTAAERASRVKLMIFDVDGVLTDGGLLFTAAGDAMKSFNSLDGHGVKLLGEAGIATAIITGRNSEIVAARAKEMKI
AHLFQGVENKLAVFAELTASLDIGADACGYMGDDWPDLPVLLRCGFAAAPANAHPEVIARAHWVAEARGGHGAVREVCDA
ILRAQRRYDALLAAACGA
>Mature_177_residues
SAALTAAERASRVKLMIFDVDGVLTDGGLLFTAAGDAMKSFNSLDGHGVKLLGEAGIATAIITGRNSEIVAARAKEMKIA
HLFQGVENKLAVFAELTASLDIGADACGYMGDDWPDLPVLLRCGFAAAPANAHPEVIARAHWVAEARGGHGAVREVCDAI
LRAQRRYDALLAAACGA

Specific function: Catalyzes the hydrolysis of KDO 8-P to KDO and inorganic phosphate [H]

COG id: COG1778

COG function: function code R; Low specificity phosphatase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the kdsC family [H]

Homologues:

Organism=Homo sapiens, GI8923900, Length=155, Percent_Identity=26.4516129032258, Blast_Score=66, Evalue=2e-11,
Organism=Escherichia coli, GI2367202, Length=160, Percent_Identity=43.75, Blast_Score=141, Evalue=2e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023214
- InterPro:   IPR013200
- InterPro:   IPR006549
- InterPro:   IPR010023 [H]

Pfam domain/function: PF08282 Hydrolase_3 [H]

EC number: =3.1.3.45 [H]

Molecular weight: Translated: 18516; Mature: 18385

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAALTAAERASRVKLMIFDVDGVLTDGGLLFTAAGDAMKSFNSLDGHGVKLLGEAGIAT
CCCHHHHHHHCCEEEEEEEECCCEEECCCEEEEECCHHHHHHCCCCCCCEEEEECCCCEE
AIITGRNSEIVAARAKEMKIAHLFQGVENKLAVFAELTASLDIGADACGYMGDDWPDLPV
EEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHH
LLRCGFAAAPANAHPEVIARAHWVAEARGGHGAVREVCDAILRAQRRYDALLAAACGA
HHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SAALTAAERASRVKLMIFDVDGVLTDGGLLFTAAGDAMKSFNSLDGHGVKLLGEAGIAT
CCHHHHHHHCCEEEEEEEECCCEEECCCEEEEECCHHHHHHCCCCCCCEEEEECCCCEE
AIITGRNSEIVAARAKEMKIAHLFQGVENKLAVFAELTASLDIGADACGYMGDDWPDLPV
EEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHH
LLRCGFAAAPANAHPEVIARAHWVAEARGGHGAVREVCDAILRAQRRYDALLAAACGA
HHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]