| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is 115352866
Identifier: 115352866
GI number: 115352866
Start: 3105457
End: 3106101
Strand: Direct
Name: 115352866
Synonym: Bamb_2815
Alternate gene names: NA
Gene position: 3105457-3106101 (Clockwise)
Preceding gene: 115352865
Following gene: 115352867
Centisome position: 87.32
GC content: 69.92
Gene sequence:
>645_bases ATGACCGCCGTTCGCCGCTTCCTGTCACTGTTGCCGCTGTCGCTCCTGCTCGCGCCGCGCCGCGCCGCGCGCCTGTTCGC CGTCACGGCGGCCGTCGCGCTCGCGCTGCCCGCGCAGGCGGCCGACACCGGTTCGGCATGGACCCTCGACCGGCTGATGT CGACGCTCGCGCAGCACAAGTCCGGGCGTGCGACGTTCACCGAGACGAAGACGCTGTCGATCGCCGCGCAGCCGCTCGAA TCGTCGGGCGAGCTCGTGTTCGTCGCGCCCGACCATCTCGAGAAGCACACGCTGAGCCCGAAGCCCGAACATCTCGTCGT CGACGGCGACATGCTCACCGTCGAGCGCAACAACCGCAAATTCACGCTCGCGCTCGCGCGCTACCCCGAGCTCGGCGCCT TCATCGACAGCATCCGCGCGACGCTCGCCGGCAACCGCTACGCGCTCGAGCAGGTGTACAAGGTCGCGCTCGCCGGCCGT GGCGACGACTGGACGCTGACGCTCACGCCGCTCGATTCGCGGATGCTGAAGGTCGTCAGCACGATCACGCTCGACGGCAC GCGCGACGTGTTGCGCAGCGTCGCGATCCGGCAGGCCGACGGCGACCATTCGACGATGCGCCTGCAACCCGTCCCGGCGA ACTGA
Upstream 100 bases:
>100_bases GGTTTAACTATTTCGATTTCTGGCAGACCGGCGACGCCGCCGCGCGCCGCGACGATGCGTGCGCGTGCACCGGGCTGCCC ACCCCGAGGGATTCCGACGC
Downstream 100 bases:
>100_bases TGGACGAACGCACCCGGCCGACCGCTCCCGTCACCCGGCGCCTGCCCGCCTGGCGGCAACGCGCGGTGCTCGTGTGGCTG CTCGCGCTCGTCGCATGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: Fatty Acyl CoA Synthetase; Lipoprotein
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MTAVRRFLSLLPLSLLLAPRRAARLFAVTAAVALALPAQAADTGSAWTLDRLMSTLAQHKSGRATFTETKTLSIAAQPLE SSGELVFVAPDHLEKHTLSPKPEHLVVDGDMLTVERNNRKFTLALARYPELGAFIDSIRATLAGNRYALEQVYKVALAGR GDDWTLTLTPLDSRMLKVVSTITLDGTRDVLRSVAIRQADGDHSTMRLQPVPAN
Sequences:
>Translated_214_residues MTAVRRFLSLLPLSLLLAPRRAARLFAVTAAVALALPAQAADTGSAWTLDRLMSTLAQHKSGRATFTETKTLSIAAQPLE SSGELVFVAPDHLEKHTLSPKPEHLVVDGDMLTVERNNRKFTLALARYPELGAFIDSIRATLAGNRYALEQVYKVALAGR GDDWTLTLTPLDSRMLKVVSTITLDGTRDVLRSVAIRQADGDHSTMRLQPVPAN >Mature_213_residues TAVRRFLSLLPLSLLLAPRRAARLFAVTAAVALALPAQAADTGSAWTLDRLMSTLAQHKSGRATFTETKTLSIAAQPLES SGELVFVAPDHLEKHTLSPKPEHLVVDGDMLTVERNNRKFTLALARYPELGAFIDSIRATLAGNRYALEQVYKVALAGRG DDWTLTLTPLDSRMLKVVSTITLDGTRDVLRSVAIRQADGDHSTMRLQPVPAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23296; Mature: 23165
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAVRRFLSLLPLSLLLAPRRAARLFAVTAAVALALPAQAADTGSAWTLDRLMSTLAQHK CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHC SGRATFTETKTLSIAAQPLESSGELVFVAPDHLEKHTLSPKPEHLVVDGDMLTVERNNRK CCCEEEEECEEEEEEECCCCCCCCEEEEECCCHHHCCCCCCCCEEEEECCEEEEEECCCE FTLALARYPELGAFIDSIRATLAGNRYALEQVYKVALAGRGDDWTLTLTPLDSRMLKVVS EEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHH TITLDGTRDVLRSVAIRQADGDHSTMRLQPVPAN HHCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCC >Mature Secondary Structure TAVRRFLSLLPLSLLLAPRRAARLFAVTAAVALALPAQAADTGSAWTLDRLMSTLAQHK HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHC SGRATFTETKTLSIAAQPLESSGELVFVAPDHLEKHTLSPKPEHLVVDGDMLTVERNNRK CCCEEEEECEEEEEEECCCCCCCCEEEEECCCHHHCCCCCCCCEEEEECCEEEEEECCCE FTLALARYPELGAFIDSIRATLAGNRYALEQVYKVALAGRGDDWTLTLTPLDSRMLKVVS EEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHH TITLDGTRDVLRSVAIRQADGDHSTMRLQPVPAN HHCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA