| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is 115352865
Identifier: 115352865
GI number: 115352865
Start: 3104486
End: 3105460
Strand: Direct
Name: 115352865
Synonym: Bamb_2814
Alternate gene names: NA
Gene position: 3104486-3105460 (Clockwise)
Preceding gene: 115352864
Following gene: 115352866
Centisome position: 87.29
GC content: 71.08
Gene sequence:
>975_bases ATGAAGCGCACCGCATGGGCCGAGCGCCAGGAACGCAGCAACGCGGCGCTGCTGCGCGCGATGGCCTGGATCTCGCTGCG GTTCGGCCGGCGGCCGTCGCGCGTCGTGCTGCACGCCATCGCGGCCTATTTCGTGCTGTTCTCGCCGGTCGCCCGCGCGG CGTCGCGCGACTACCTGCGCCGCGTGCTCGGCCGTCCGGCGCGCTGGCGCGACGTGTACCGGCACGTGTTCACGTTCGCG GCGACGATCCACGACCGCATCTACCTGATGAACGGCCGCTTCGACCTGTTCGACATCCGGCTGCACGGCGAAACGCGGGT CGATGACGCGCTCGCCGGGGGGCGCGGCGCAGTGCTGATGGGCGCGCACCTCGGCAGCTTCGAAGTCGTGCGCGCGATCG GCCGCACGCGGCCGGACCTGCGCGTCGTCGTCACGATGTTCGAAGAGAACGCGCGCAAGATCAACGCGACGCTCGCCGCC GTGAATCCGGCCGCGAAGCCGGAAGTGATTCCGCTCGGGCAGGTCGATTCGATGCTGAAGGTGCGCGAGCGCCTCGACGC GAACTGCATGGTCGGGATGCTCGCCGACCGCACGCTGCTCGACGACGCGGCCGCGTCGATGCGGCGGCTGCCGCTGCTCG GCGCGCCGGCCGCGTTCCCGCTCGGGCCGCTCTACATGGCCGCGATGCTGCGGCGCCCGGTGCTGTTCATGACCGGCCTC TATCGCGACGGCAATCGCTACGACGTGCACTTCGAGACGCTCGCCGATTTCTCCGACGTGCGCCGCGACACGCGCGCGGC GGCCGTCGATGCGGCGCTCGCGCGCTACGTCGCGCTGCTCGACCGGTATTGCCGCGCGGCCCCGTACAACTGGTTTAACT ATTTCGATTTCTGGCAGACCGGCGACGCCGCCGCGCGCCGCGACGATGCGTGCGCGTGCACCGGGCTGCCCACCCCGAGG GATTCCGACGCATGA
Upstream 100 bases:
>100_bases CGGCAGGCGGTGCAATCCGCTTCACGCTGCGCGCCGGCACGCGCGACGTCGCGACCGGCGTGCTGTCCGCGCCGCCAGCC GCACCGGAAGGCGCGCAGCC
Downstream 100 bases:
>100_bases CCGCCGTTCGCCGCTTCCTGTCACTGTTGCCGCTGTCGCTCCTGCTCGCGCCGCGCCGCGCCGCGCGCCTGTTCGCCGTC ACGGCGGCCGTCGCGCTCGC
Product: acyltransferase-like protein
Products: NA
Alternate protein names: Lipid A Biosynthesis Acyltransferase; Glycosyl Transferase Family Protein; Glycosyl Transferase Group 2 Family Protein; Acetyltransferase; Glycosyl Transferase; Glycosyl Transferase Family 2 And Acyltransferase Domains; Acyltransferase-Like Protein; Lipid A Biosynthesis Acyltransferase Family; Bacterial Lipid A Biosynthesis Acyltransferase Family; Oligosaccharide Acyltransferase Family Protein; Family 2 Glycosyl Transferase; XanthomoNADin Biosynthesis Acyltransferase Protein
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MKRTAWAERQERSNAALLRAMAWISLRFGRRPSRVVLHAIAAYFVLFSPVARAASRDYLRRVLGRPARWRDVYRHVFTFA ATIHDRIYLMNGRFDLFDIRLHGETRVDDALAGGRGAVLMGAHLGSFEVVRAIGRTRPDLRVVVTMFEENARKINATLAA VNPAAKPEVIPLGQVDSMLKVRERLDANCMVGMLADRTLLDDAAASMRRLPLLGAPAAFPLGPLYMAAMLRRPVLFMTGL YRDGNRYDVHFETLADFSDVRRDTRAAAVDAALARYVALLDRYCRAAPYNWFNYFDFWQTGDAAARRDDACACTGLPTPR DSDA
Sequences:
>Translated_324_residues MKRTAWAERQERSNAALLRAMAWISLRFGRRPSRVVLHAIAAYFVLFSPVARAASRDYLRRVLGRPARWRDVYRHVFTFA ATIHDRIYLMNGRFDLFDIRLHGETRVDDALAGGRGAVLMGAHLGSFEVVRAIGRTRPDLRVVVTMFEENARKINATLAA VNPAAKPEVIPLGQVDSMLKVRERLDANCMVGMLADRTLLDDAAASMRRLPLLGAPAAFPLGPLYMAAMLRRPVLFMTGL YRDGNRYDVHFETLADFSDVRRDTRAAAVDAALARYVALLDRYCRAAPYNWFNYFDFWQTGDAAARRDDACACTGLPTPR DSDA >Mature_324_residues MKRTAWAERQERSNAALLRAMAWISLRFGRRPSRVVLHAIAAYFVLFSPVARAASRDYLRRVLGRPARWRDVYRHVFTFA ATIHDRIYLMNGRFDLFDIRLHGETRVDDALAGGRGAVLMGAHLGSFEVVRAIGRTRPDLRVVVTMFEENARKINATLAA VNPAAKPEVIPLGQVDSMLKVRERLDANCMVGMLADRTLLDDAAASMRRLPLLGAPAAFPLGPLYMAAMLRRPVLFMTGL YRDGNRYDVHFETLADFSDVRRDTRAAAVDAALARYVALLDRYCRAAPYNWFNYFDFWQTGDAAARRDDACACTGLPTPR DSDA
Specific function: Unknown
COG id: COG4261
COG function: function code R; Predicted acyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36458; Mature: 36458
Theoretical pI: Translated: 10.31; Mature: 10.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRTAWAERQERSNAALLRAMAWISLRFGRRPSRVVLHAIAAYFVLFSPVARAASRDYLR CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVLGRPARWRDVYRHVFTFAATIHDRIYLMNGRFDLFDIRLHGETRVDDALAGGRGAVLM HHHCCCHHHHHHHHHHHHHHHHHHCEEEEECCCEEEEEEEECCCCCHHHHHCCCCCEEEE GAHLGSFEVVRAIGRTRPDLRVVVTMFEENARKINATLAAVNPAAKPEVIPLGQVDSMLK ECCCCHHHHHHHHHCCCCCCEEEHHHHHHCHHHHHHEEEECCCCCCCCEEECCHHHHHHH VRERLDANCMVGMLADRTLLDDAAASMRRLPLLGAPAAFPLGPLYMAAMLRRPVLFMTGL HHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHH YRDGNRYDVHFETLADFSDVRRDTRAAAVDAALARYVALLDRYCRAAPYNWFNYFDFWQT CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCC GDAAARRDDACACTGLPTPRDSDA CCHHHCCCCCEEECCCCCCCCCCC >Mature Secondary Structure MKRTAWAERQERSNAALLRAMAWISLRFGRRPSRVVLHAIAAYFVLFSPVARAASRDYLR CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVLGRPARWRDVYRHVFTFAATIHDRIYLMNGRFDLFDIRLHGETRVDDALAGGRGAVLM HHHCCCHHHHHHHHHHHHHHHHHHCEEEEECCCEEEEEEEECCCCCHHHHHCCCCCEEEE GAHLGSFEVVRAIGRTRPDLRVVVTMFEENARKINATLAAVNPAAKPEVIPLGQVDSMLK ECCCCHHHHHHHHHCCCCCCEEEHHHHHHCHHHHHHEEEECCCCCCCCEEECCHHHHHHH VRERLDANCMVGMLADRTLLDDAAASMRRLPLLGAPAAFPLGPLYMAAMLRRPVLFMTGL HHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHH YRDGNRYDVHFETLADFSDVRRDTRAAAVDAALARYVALLDRYCRAAPYNWFNYFDFWQT CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCC GDAAARRDDACACTGLPTPRDSDA CCHHHCCCCCEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA