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The map label for this gene is lutB [H]

Identifier: 115352856

GI number: 115352856

Start: 3093803

End: 3095248

Strand: Direct

Name: lutB [H]

Synonym: Bamb_2805

Alternate gene names: 115352856

Gene position: 3093803-3095248 (Clockwise)

Preceding gene: 115352855

Following gene: 115352857

Centisome position: 86.99

GC content: 70.26

Gene sequence:

>1446_bases
ATGAGCGACCAACCGCTGCAATTCGTCGCCCCCGGCGACTTCAAGGCCCGTGCGCGCGCCGCGCTCGACGATCCCGCGCT
GCGCCAAAGCTTTCGCGGCGCGATGGACTTCCTGCAGGGCAAGCGTACGTCCCAGTTCCCCGACGACACCGAGCTGCAGC
AGCTGCGCGATCTCGGCGAAGCCGTGCGGCAGCACGCGCTCGCGCAACTGCCGGCGCTGCTCGAACAGTTGGAGGCAAAG
CTCACCGCCGCCGGCGTGCAGGTGCACTGGGCGGAGACCGCCGCCGACGCGAACGCGATCGTGCTCGGCATCGCGCAGGC
GAACCATGCGCGCCGCGTGATCAAGGGCAAGTCGATGGCGAGCGAGGAAATCGAGCTGAACCATTACCTCGCGGAGCACG
GCGTCGACTGCATCGAGTCCGACATGGGCGAGTTCATCGTGCAGCTCGCGGGCGAGAAGCCGTCGCACATCGTGATGCCG
GCGATCCACAAGACGCGCGGCGACATCGCCGAGCTGTTCGAGCGGCACATCCCCGGCACGCGCTACACGGAGGACGTCGA
CGAGCTGATCCAGACCGGCCGGCGCGCGCTGCGCCGCGCGTTCGCGGAAGCCGACATCGGCCTGTCCGGCGTGAACTTCG
CGGCGGCCGACACGGGCACGCTGTGGCTCGTCGAAAACGAGGGCAACGGCCGGCTGTCGACCACCGTGCCCGATACGCAC
GTCGCGATCATGGGGATCGAGAAGGTCGTCGAGAAGCTCGAGCACATCGTGCCGCTGTCGAGCCTGCTGACGCGTTCGGC
CACCGGCCAGGCGATCACGACCTACTTCAACCTGATCTCGGGCCCGCGCCGCGAAGGCGAACGCGACGGCCCGCGCGAGC
TGCATCTCGTGCTGCTCGACAACGGCCGCACGCAGGCCTACGCGGACGAACAGCTGCGCGCGACGCTGCAGTGCATCCGC
TGCGGCGCGTGCATGAACCATTGCCCCGTCTATACGCGCATCGGCGGCCATGCGTACGGCACGACCTATCCCGGCCCGAT
CGGCAAGATCATCTCGCCGCACCTGCTCGGCCTCGACGCGACGGCCGACCTGCCGACCGCGTCGACGCTGTGCGGCGCAT
GCGGCGAGGTGTGCCCGGTCCGGATTCCGATCCCGCAGCTGCTGGTGCGGCTGCGCACCGAGGCGAACCGCAAGCCCGAC
GAACCCGTCGCGCATCCGCTGCGCGGCCAGGGTGCGAACTACAACCGCGCGGAAGACCTCGTGTGGCGCTTCTGGTCGGG
CGCGTTCGCGCATCCGCGCGCGTATCGCGCGTTCCGCTGGACCGCGACGCGGCTGCGCGCGCTCACGCCCGCGAAGCAGA
TGGGCTGGACGCAGCACCGCACGCCGCTCGAGCCGGCGCCGCGCAGCCTGTCCGACCTGCTGCGCGCGCGCGGCCAGCCC
GAATAG

Upstream 100 bases:

>100_bases
CCCTCGCGTACGGCGCCCACGGCCCGCGCAACCTCTGGGTCGTGATCGTCACCGGGCCGGCCGCCGAACCGGCCGCAACC
GCCTGCCAGGAGCTGCCGCG

Downstream 100 bases:

>100_bases
AACACCCCGCTTTCAAACCCGTACCCCGATAAATCCATGGAGGAGACAACCATGCAGGTTTGGCATCAGATCTACACGCC
GCTCGGCAGCCTCGGGCTGT

Product: iron-sulfur cluster binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 481; Mature: 480

Protein sequence:

>481_residues
MSDQPLQFVAPGDFKARARAALDDPALRQSFRGAMDFLQGKRTSQFPDDTELQQLRDLGEAVRQHALAQLPALLEQLEAK
LTAAGVQVHWAETAADANAIVLGIAQANHARRVIKGKSMASEEIELNHYLAEHGVDCIESDMGEFIVQLAGEKPSHIVMP
AIHKTRGDIAELFERHIPGTRYTEDVDELIQTGRRALRRAFAEADIGLSGVNFAAADTGTLWLVENEGNGRLSTTVPDTH
VAIMGIEKVVEKLEHIVPLSSLLTRSATGQAITTYFNLISGPRREGERDGPRELHLVLLDNGRTQAYADEQLRATLQCIR
CGACMNHCPVYTRIGGHAYGTTYPGPIGKIISPHLLGLDATADLPTASTLCGACGEVCPVRIPIPQLLVRLRTEANRKPD
EPVAHPLRGQGANYNRAEDLVWRFWSGAFAHPRAYRAFRWTATRLRALTPAKQMGWTQHRTPLEPAPRSLSDLLRARGQP
E

Sequences:

>Translated_481_residues
MSDQPLQFVAPGDFKARARAALDDPALRQSFRGAMDFLQGKRTSQFPDDTELQQLRDLGEAVRQHALAQLPALLEQLEAK
LTAAGVQVHWAETAADANAIVLGIAQANHARRVIKGKSMASEEIELNHYLAEHGVDCIESDMGEFIVQLAGEKPSHIVMP
AIHKTRGDIAELFERHIPGTRYTEDVDELIQTGRRALRRAFAEADIGLSGVNFAAADTGTLWLVENEGNGRLSTTVPDTH
VAIMGIEKVVEKLEHIVPLSSLLTRSATGQAITTYFNLISGPRREGERDGPRELHLVLLDNGRTQAYADEQLRATLQCIR
CGACMNHCPVYTRIGGHAYGTTYPGPIGKIISPHLLGLDATADLPTASTLCGACGEVCPVRIPIPQLLVRLRTEANRKPD
EPVAHPLRGQGANYNRAEDLVWRFWSGAFAHPRAYRAFRWTATRLRALTPAKQMGWTQHRTPLEPAPRSLSDLLRARGQP
E
>Mature_480_residues
SDQPLQFVAPGDFKARARAALDDPALRQSFRGAMDFLQGKRTSQFPDDTELQQLRDLGEAVRQHALAQLPALLEQLEAKL
TAAGVQVHWAETAADANAIVLGIAQANHARRVIKGKSMASEEIELNHYLAEHGVDCIESDMGEFIVQLAGEKPSHIVMPA
IHKTRGDIAELFERHIPGTRYTEDVDELIQTGRRALRRAFAEADIGLSGVNFAAADTGTLWLVENEGNGRLSTTVPDTHV
AIMGIEKVVEKLEHIVPLSSLLTRSATGQAITTYFNLISGPRREGERDGPRELHLVLLDNGRTQAYADEQLRATLQCIRC
GACMNHCPVYTRIGGHAYGTTYPGPIGKIISPHLLGLDATADLPTASTLCGACGEVCPVRIPIPQLLVRLRTEANRKPDE
PVAHPLRGQGANYNRAEDLVWRFWSGAFAHPRAYRAFRWTATRLRALTPAKQMGWTQHRTPLEPAPRSLSDLLRARGQPE

Specific function: Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source. Has probably a role as an electron transporter during oxidation of L-lactate [H]

COG id: COG1139

COG function: function code C; Uncharacterized conserved protein containing a ferredoxin-like domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1786498, Length=471, Percent_Identity=39.2781316348195, Blast_Score=346, Evalue=2e-96,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR003741
- InterPro:   IPR004452
- InterPro:   IPR002698
- InterPro:   IPR012285
- InterPro:   IPR009051
- InterPro:   IPR022825 [H]

Pfam domain/function: PF02589 DUF162 [H]

EC number: NA

Molecular weight: Translated: 52893; Mature: 52762

Theoretical pI: Translated: 7.12; Mature: 7.12

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDQPLQFVAPGDFKARARAALDDPALRQSFRGAMDFLQGKRTSQFPDDTELQQLRDLGE
CCCCCCEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
AVRQHALAQLPALLEQLEAKLTAAGVQVHWAETAADANAIVLGIAQANHARRVIKGKSMA
HHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHCCCCCEEEEEECCCHHHHHHHHCCCCC
SEEIELNHYLAEHGVDCIESDMGEFIVQLAGEKPSHIVMPAIHKTRGDIAELFERHIPGT
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCEEECCCHHHCCCHHHHHHHHHCCCC
RYTEDVDELIQTGRRALRRAFAEADIGLSGVNFAAADTGTLWLVENEGNGRLSTTVPDTH
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCEEEEEEECCCCEEEECCCCCH
VAIMGIEKVVEKLEHIVPLSSLLTRSATGQAITTYFNLISGPRREGERDGPRELHLVLLD
HHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEE
NGRTQAYADEQLRATLQCIRCGACMNHCPVYTRIGGHAYGTTYPGPIGKIISPHLLGLDA
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHCCCHHCCCCC
TADLPTASTLCGACGEVCPVRIPIPQLLVRLRTEANRKPDEPVAHPLRGQGANYNRAEDL
CCCCCCHHHHHHHCCCCCEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHH
VWRFWSGAFAHPRAYRAFRWTATRLRALTPAKQMGWTQHRTPLEPAPRSLSDLLRARGQP
HHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCHHHHHHHHHCCCC
E
C
>Mature Secondary Structure 
SDQPLQFVAPGDFKARARAALDDPALRQSFRGAMDFLQGKRTSQFPDDTELQQLRDLGE
CCCCCEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
AVRQHALAQLPALLEQLEAKLTAAGVQVHWAETAADANAIVLGIAQANHARRVIKGKSMA
HHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHCCCCCEEEEEECCCHHHHHHHHCCCCC
SEEIELNHYLAEHGVDCIESDMGEFIVQLAGEKPSHIVMPAIHKTRGDIAELFERHIPGT
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCEEECCCHHHCCCHHHHHHHHHCCCC
RYTEDVDELIQTGRRALRRAFAEADIGLSGVNFAAADTGTLWLVENEGNGRLSTTVPDTH
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCEEEEEEECCCCEEEECCCCCH
VAIMGIEKVVEKLEHIVPLSSLLTRSATGQAITTYFNLISGPRREGERDGPRELHLVLLD
HHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEE
NGRTQAYADEQLRATLQCIRCGACMNHCPVYTRIGGHAYGTTYPGPIGKIISPHLLGLDA
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHCCCHHCCCCC
TADLPTASTLCGACGEVCPVRIPIPQLLVRLRTEANRKPDEPVAHPLRGQGANYNRAEDL
CCCCCCHHHHHHHCCCCCEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHH
VWRFWSGAFAHPRAYRAFRWTATRLRALTPAKQMGWTQHRTPLEPAPRSLSDLLRARGQP
HHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCHHHHHHHHHCCCC
E
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA