| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is 115352815
Identifier: 115352815
GI number: 115352815
Start: 3046344
End: 3047393
Strand: Direct
Name: 115352815
Synonym: Bamb_2764
Alternate gene names: NA
Gene position: 3046344-3047393 (Clockwise)
Preceding gene: 115352810
Following gene: 115352816
Centisome position: 85.65
GC content: 69.52
Gene sequence:
>1050_bases ATGACGCCCCCATCCGCCGCATCCCAGCCCGACGCCCGCCTCGAAGCACTGACCGCGTGGCTGCGCCCGCTCGCCGAGCG CTTCGCCCTCGACCTGTCGACCCTCGCACCCGCGTCGTCGGACGCCAGTTTCCGCCGCTATTTCCGTGTCGGGTCGGCCA CGCGCCCCGGCGGCTCGCTGATCGCGGTCGACGCGCCGCCGCCCGAGAAGTGCCGTGAATTCGTCCAGGTCGCGCAGTTG CTCGCCGCGGCCGGCGACCACGTGCCGGACGTGCTGGCCCACGATTTCGACGCCGGCTTCATGCTCGTGACCGACCTCGG CCGCACGTCGTACATCTCGGTGCTCGATCCGGCCGATCCGGTCGCGGCACGCCCGCTGATGCGCGACGCGCTCGACGCGC TGATCCGCTTCCAGCTGACGTCGCGGCCGGACGTGCTGCCGCCGTTCGACGAGGCGTTCCTGCGCCGCGAGACGGAGCTG CTGCCCGAATGGTTCGTCGGCCGGCACCTCGGCAGGCCCGTCACCGACGCGATGCGCGGCACACTCGATCGCACCTTCGC GCTGCTGGTCGCGAGCGCCCATGCGCAGCCGCAGGGCTTCATGCTGCGCGATTTCATGCCGCGCAACCTGATGGTCTGCG AGCCGAACCCGGGCGTGCTCGACTTCCAGGACGCCGTGTACGGGCCGCTCACGTACGACGTCGTGTCGCTGGTGCGCGAC GCGTTCATCAGCTGGGACGAGGAGTTCGAGCTCGACTGCTTCGCGTACTACTGGGAGCGGGCGAAGAAAGCCGGTCTGCC GGTCGATCCGGACTTCGGCGAGTTCTACCGCCAGCTCGAATGGATGGGGCTGCAGCGCCACATCAAGATCCTCGGCCTGT TCGCGCGCATCAACTACCGCGACGGCAAGCCGCACTACCTGAACGACCTGCCGCGCTTTGTCGCCTATGCGCGCAAGGTC GCGCTGCGCTACCGCCCGCTCGTGCCGTTCGCGAAGCTGCTCGACGAGCTCGAGGGCAAGGGCGCGGCCGACGTCGGCTA TACATTCTGA
Upstream 100 bases:
>100_bases GCGACAGGCGGCGGGCCTGCGCGGCGCAAGCTGACGCGGGGCGCGTCAAAAAAGTCGTGGGGTATTATATGGCAAGACGT TCCCCCCTCCGCCGAGTTTC
Downstream 100 bases:
>100_bases CCGTTCTGACCGCTCTCACATTCAGACGAACAACATGAGCACTACCCTCACCACGGCGATGATCTTCGCCGCCGGGCGCG GCGAGCGGATGCGTCCGCTG
Product: aminoglycoside phosphotransferase
Products: NA
Alternate protein names: Phosphotransferase; Phosphotransferase Family Protein; Phosphotransferase Related Ser/Thr Protein Kinase; Chlorosome Protein; Phosphotransferase Family Protein; Phosphotransferase Family; .5 Kda Chlorosome Protein; Bifunctional ATPase/Phosphotransferase; P-Loop Hydrolase; Putatuive Aminoglycoside Phosphotransferase; Ser/Thr Kinase-Like Phosphotransferase; ATPase; .5 KDa CHLOROSOME PROTEIN; P-Loop Hydrolase/Phosphotransferase; Phosphotransferase Protein
Number of amino acids: Translated: 349; Mature: 348
Protein sequence:
>349_residues MTPPSAASQPDARLEALTAWLRPLAERFALDLSTLAPASSDASFRRYFRVGSATRPGGSLIAVDAPPPEKCREFVQVAQL LAAAGDHVPDVLAHDFDAGFMLVTDLGRTSYISVLDPADPVAARPLMRDALDALIRFQLTSRPDVLPPFDEAFLRRETEL LPEWFVGRHLGRPVTDAMRGTLDRTFALLVASAHAQPQGFMLRDFMPRNLMVCEPNPGVLDFQDAVYGPLTYDVVSLVRD AFISWDEEFELDCFAYYWERAKKAGLPVDPDFGEFYRQLEWMGLQRHIKILGLFARINYRDGKPHYLNDLPRFVAYARKV ALRYRPLVPFAKLLDELEGKGAADVGYTF
Sequences:
>Translated_349_residues MTPPSAASQPDARLEALTAWLRPLAERFALDLSTLAPASSDASFRRYFRVGSATRPGGSLIAVDAPPPEKCREFVQVAQL LAAAGDHVPDVLAHDFDAGFMLVTDLGRTSYISVLDPADPVAARPLMRDALDALIRFQLTSRPDVLPPFDEAFLRRETEL LPEWFVGRHLGRPVTDAMRGTLDRTFALLVASAHAQPQGFMLRDFMPRNLMVCEPNPGVLDFQDAVYGPLTYDVVSLVRD AFISWDEEFELDCFAYYWERAKKAGLPVDPDFGEFYRQLEWMGLQRHIKILGLFARINYRDGKPHYLNDLPRFVAYARKV ALRYRPLVPFAKLLDELEGKGAADVGYTF >Mature_348_residues TPPSAASQPDARLEALTAWLRPLAERFALDLSTLAPASSDASFRRYFRVGSATRPGGSLIAVDAPPPEKCREFVQVAQLL AAAGDHVPDVLAHDFDAGFMLVTDLGRTSYISVLDPADPVAARPLMRDALDALIRFQLTSRPDVLPPFDEAFLRRETELL PEWFVGRHLGRPVTDAMRGTLDRTFALLVASAHAQPQGFMLRDFMPRNLMVCEPNPGVLDFQDAVYGPLTYDVVSLVRDA FISWDEEFELDCFAYYWERAKKAGLPVDPDFGEFYRQLEWMGLQRHIKILGLFARINYRDGKPHYLNDLPRFVAYARKVA LRYRPLVPFAKLLDELEGKGAADVGYTF
Specific function: Unknown
COG id: COG3178
COG function: function code R; Predicted phosphotransferase related to Ser/Thr protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39225; Mature: 39094
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPPSAASQPDARLEALTAWLRPLAERFALDLSTLAPASSDASFRRYFRVGSATRPGGSL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCE IAVDAPPPEKCREFVQVAQLLAAAGDHVPDVLAHDFDAGFMLVTDLGRTSYISVLDPADP EEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEEEEECCCCCEEEEECCCCC VAARPLMRDALDALIRFQLTSRPDVLPPFDEAFLRRETELLPEWFVGRHLGRPVTDAMRG HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH TLDRTFALLVASAHAQPQGFMLRDFMPRNLMVCEPNPGVLDFQDAVYGPLTYDVVSLVRD HHHHHHHHHHHHHCCCCCCCHHHHCCCCCEEEECCCCCEEECHHHHCCCHHHHHHHHHHH AFISWDEEFELDCFAYYWERAKKAGLPVDPDFGEFYRQLEWMGLQRHIKILGLFARINYR HHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECC DGKPHYLNDLPRFVAYARKVALRYRPLVPFAKLLDELEGKGAADVGYTF CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure TPPSAASQPDARLEALTAWLRPLAERFALDLSTLAPASSDASFRRYFRVGSATRPGGSL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCE IAVDAPPPEKCREFVQVAQLLAAAGDHVPDVLAHDFDAGFMLVTDLGRTSYISVLDPADP EEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEEEEECCCCCEEEEECCCCC VAARPLMRDALDALIRFQLTSRPDVLPPFDEAFLRRETELLPEWFVGRHLGRPVTDAMRG HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH TLDRTFALLVASAHAQPQGFMLRDFMPRNLMVCEPNPGVLDFQDAVYGPLTYDVVSLVRD HHHHHHHHHHHHHCCCCCCCHHHHCCCCCEEEECCCCCEEECHHHHCCCHHHHHHHHHHH AFISWDEEFELDCFAYYWERAKKAGLPVDPDFGEFYRQLEWMGLQRHIKILGLFARINYR HHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECC DGKPHYLNDLPRFVAYARKVALRYRPLVPFAKLLDELEGKGAADVGYTF CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA