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The map label for this gene is ydeD [C]

Identifier: 115352810

GI number: 115352810

Start: 3039431

End: 3040342

Strand: Direct

Name: ydeD [C]

Synonym: Bamb_2759

Alternate gene names: 115352810

Gene position: 3039431-3040342 (Clockwise)

Preceding gene: 115352808

Following gene: 115352815

Centisome position: 85.46

GC content: 71.93

Gene sequence:

>912_bases
GTGCGCCGCGCACTCGATACGCGCGCCATCGGCGTGATGCTGCTGCTGTGCGCGATCTGGGGCTTCCAGCAGGTCGCGAT
CAAGAGCACGAACGCGGCGATCCCGCCGATGTTCCAGGCCGGGCTGCGCTCGGTGATCGCCGCGCTGCTGCTGTGGGGTT
GGGCGCACTCGCGCGGCACGCCGCTGTTCCGCGCGGACGGCACGCTCGGCGCGGGCATCGCCGCCGGCGCGCTGTTCGCC
GGCGAGTTCATCTGCGTGTTCTTCGGGCTGACGCTGACGAGCGCATCGCACATGGCGATCTTCCTGTACACGGCACCGTG
CTTCACCGCGCTCGGCCTGCACCTGTTCACGCCGGGTGAGCGGCTGCAACGCGTTCAGTGGGCCGGCGTGGGCCTCGCGT
TCGCCGGCATCGCGCTCGCGTTCGCGGATGGCTTCCTCGAGCCGCGCGCGCCCGGCGCGTCGGTCCTGGCGGGGCTCGCC
GGCGACGCGCTCGGGATCCTCGGCGGCGCGATGTGGGCCGCGACGACGGTCGTCGTGCGCTGGACGTCGCTCGCGCGGGC
CAGCGCGAGCAAGACGCTGTTCTACCAGCTCGCGGTGTCGGCCGTCGTGCTGGTCGCGCTCGCCGCGCTGCTCGGCCAGA
TGTCGTTCGCGCAGGTCACGCCGGTCGCGCTCGCGAGCCTCGCCTACCAGTCGGTGATCGTCGCGTTCGTCAGCTATCTG
TCGTGGTTCTGGCTGCTGACGCGCTACAGCGCGTCGCGGCTGTCCGTGTTCACGTTCCTGTCGCCGCTGTTCGGCGTCGC
GTTTGGCGTGCTGCTGCTCGGCGAATCGGTCGGCTGGCGCTTCATGTCGGCGGCCGCGCTGGTGCTGACCGGGATCGCGC
TCGTCAACGCGCCGCCACGCCGGCGCGCGTAA

Upstream 100 bases:

>100_bases
CCGGACACGCCGTCCGCTCGCCGCTGCCCCTGCCGATGTCCGTGCCCCCTCCCCGCCGCGTCGGCGTGGTCCGCCGATGA
GCGCGCTTGCCGGGTCGCCC

Downstream 100 bases:

>100_bases
GGGCGCGCGGCCGCGGTCCTTCGTCGACGAAAGCGGATCGGAAAAATAAAAAGGCTGCCCGTCAGGACAGCCTCATGAAT
CTCGAGCCAGCGCGCGTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MRRALDTRAIGVMLLLCAIWGFQQVAIKSTNAAIPPMFQAGLRSVIAALLLWGWAHSRGTPLFRADGTLGAGIAAGALFA
GEFICVFFGLTLTSASHMAIFLYTAPCFTALGLHLFTPGERLQRVQWAGVGLAFAGIALAFADGFLEPRAPGASVLAGLA
GDALGILGGAMWAATTVVVRWTSLARASASKTLFYQLAVSAVVLVALAALLGQMSFAQVTPVALASLAYQSVIVAFVSYL
SWFWLLTRYSASRLSVFTFLSPLFGVAFGVLLLGESVGWRFMSAAALVLTGIALVNAPPRRRA

Sequences:

>Translated_303_residues
MRRALDTRAIGVMLLLCAIWGFQQVAIKSTNAAIPPMFQAGLRSVIAALLLWGWAHSRGTPLFRADGTLGAGIAAGALFA
GEFICVFFGLTLTSASHMAIFLYTAPCFTALGLHLFTPGERLQRVQWAGVGLAFAGIALAFADGFLEPRAPGASVLAGLA
GDALGILGGAMWAATTVVVRWTSLARASASKTLFYQLAVSAVVLVALAALLGQMSFAQVTPVALASLAYQSVIVAFVSYL
SWFWLLTRYSASRLSVFTFLSPLFGVAFGVLLLGESVGWRFMSAAALVLTGIALVNAPPRRRA
>Mature_303_residues
MRRALDTRAIGVMLLLCAIWGFQQVAIKSTNAAIPPMFQAGLRSVIAALLLWGWAHSRGTPLFRADGTLGAGIAAGALFA
GEFICVFFGLTLTSASHMAIFLYTAPCFTALGLHLFTPGERLQRVQWAGVGLAFAGIALAFADGFLEPRAPGASVLAGLA
GDALGILGGAMWAATTVVVRWTSLARASASKTLFYQLAVSAVVLVALAALLGQMSFAQVTPVALASLAYQSVIVAFVSYL
SWFWLLTRYSASRLSVFTFLSPLFGVAFGVLLLGESVGWRFMSAAALVLTGIALVNAPPRRRA

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 31878; Mature: 31878

Theoretical pI: Translated: 11.24; Mature: 11.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRALDTRAIGVMLLLCAIWGFQQVAIKSTNAAIPPMFQAGLRSVIAALLLWGWAHSRGT
CCCCHHHHHHHHHHHHHHHHCHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
PLFRADGTLGAGIAAGALFAGEFICVFFGLTLTSASHMAIFLYTAPCFTALGLHLFTPGE
CEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHCCCHH
RLQRVQWAGVGLAFAGIALAFADGFLEPRAPGASVLAGLAGDALGILGGAMWAATTVVVR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WTSLARASASKTLFYQLAVSAVVLVALAALLGQMSFAQVTPVALASLAYQSVIVAFVSYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SWFWLLTRYSASRLSVFTFLSPLFGVAFGVLLLGESVGWRFMSAAALVLTGIALVNAPPR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC
RRA
CCC
>Mature Secondary Structure
MRRALDTRAIGVMLLLCAIWGFQQVAIKSTNAAIPPMFQAGLRSVIAALLLWGWAHSRGT
CCCCHHHHHHHHHHHHHHHHCHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
PLFRADGTLGAGIAAGALFAGEFICVFFGLTLTSASHMAIFLYTAPCFTALGLHLFTPGE
CEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHCCCHH
RLQRVQWAGVGLAFAGIALAFADGFLEPRAPGASVLAGLAGDALGILGGAMWAATTVVVR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WTSLARASASKTLFYQLAVSAVVLVALAALLGQMSFAQVTPVALASLAYQSVIVAFVSYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SWFWLLTRYSASRLSVFTFLSPLFGVAFGVLLLGESVGWRFMSAAALVLTGIALVNAPPR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC
RRA
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]