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The map label for this gene is glyS

Identifier: 115352805

GI number: 115352805

Start: 3034105

End: 3036204

Strand: Direct

Name: glyS

Synonym: Bamb_2754

Alternate gene names: 115352805

Gene position: 3034105-3036204 (Clockwise)

Preceding gene: 115352804

Following gene: 115352806

Centisome position: 85.31

GC content: 69.1

Gene sequence:

>2100_bases
ATGACGCATAACCATCCCGCCCCCCTGCTCGTCGAATTGCTGACCGAAGAGCTGCCGCCGAAGGCCCTCGCGCGCCTCGG
CGACGCATTCGCCGAAGGTCTCGCGCAACGCCTCGCGGCGCGCGACCTCGTCGAAGGCGAACTCGTGTTCGAACGCTACG
CCACGCCGCGCCGCCTCGCCGTCGTCGTGCAGAACGTGCGCGCCGTCGCGCCTGAAAAGCAGGTCCGCGAAAAGGTCCTG
CCCGTCTCGGTCGCGCTCGACGCCGAAGGCAAGCCGACGGCCCCGCTCGCGAAGAAGCTCGCGGCGCTCGGTCACCCGCA
CCTGTCGATCGCCGATCTCGAGCGCGCGCAGGACGGCAAGGCCGAAGCGTTCTTCGTCAATTACTCGGCAGCCGGCGCGA
CGCTCGCCGACGGCCTGCAGGCCGCGCTCGACGAAACCCTCGCGAAGCTGCCGATCCCGAAGTTCATGACCTACCAGCGC
CCGGACGGCACCGACGTGAAGTTCGTGCGCCCGGTGCACCGCCTGACCGTGCTGCACGACGATCGCGTCGTGCCCGTGAC
CGCGTTCGGCATCGACGCCGGCGACACCACGCTCGGCCACCGCTTCCTGTCCGACGGCCTCGTCGCGATCCAGCATGCGC
ACGCGTATGCCGACACGCTGCGCGACAAGGGTCGCGTGATCGCGCACTTCGCCGACCGCCGCGAAACGATCCGCACGCAG
CTGAACGAACACGCGAACGGCGACACGGTCGTGATGCCCGAAGCGCTGCTCGACGAAGTGACGTCGCTGGTCGAATGGCC
GGTCGTCTATCCGTGCCGCTTCGAGGACGAATTCCTGCAGGTGCCGCAGGAATGCCTGATCCTCACGATGCAGACGAACC
AGAAGTACTTCGCGCTGACCGACGTCGGCGGCAAGCTGCGCTCGCGCTTCCTGATCGTGTCGAACATCGACACGAAGACG
CCGGGCGAGATCATCGAAGGCAACGAGCGCGTCGTGCGCCCGCGCCTCGCCGACGCGAAGTTCTTCTTCGAGCAGGACAA
GAAGAAGCCGCTCGCCGACCGCGTGCCGCTGCTCGCGAACGTCGTCTATCACAACAAGCTCGGTTCGGCGCTCGCGCGCG
TCGAGCGCCTCGAGGCGCTGGCCGGCGAGATCGCGCCCGCGATCGGCGCCGACGCCGCGCACGCGAAGCGCGCCGCGCGC
CTCGCGAAGGCCGACCTGCTGACCGACATGGTCGGCGAGTTCCCTGAACTGCAGGGCACGATGGGCACGTACTACGCGCG
TCACGACGGCGAGCCCGACGACGTCGCGCTCGCATGCGCCGAGCACTACCAGCCGCGCTTCTCCGGCGACGCGCTGCCGA
CCACGCCGGTGTCGACCGCCGTCGCGCTGGCCGACAAGCTCGAGACGATCGTCGGCATCTGGGGCATCGGCCTCGCGCCG
ACGGGCGAAAAGGATCCGTTCGCGCTGCGCCGCCACGCGCTCGGCGTGCTGCGCCTGCTGCTCGAGAAGCAGCTGCCGCT
CGATCTCGTCGCGCTGCTGCGCACGGCCCATGCACGCTTCGAAGGCGTGCCGGGCGTCGCCGAATCGACCGACGCGATCT
TCGCGTTCTTCATGGACCGCCTGCGCGGCCTGCTGCGCGAACGCGGCTACTCGGCCGGCGAAGTCGACGCGGTGCTGAGC
CTGAACCCGACGCGCGTCGACGATCTCGTCGCGCGCCTCGACGCGGTGCGCGAATTCACGCTTCTCGCGGAAGCCGAGGC
GCTCGCGGCCGCGAACAAGCGGATCTCGAACATCCTGAAGAAGTCGGAAGGCGGCGCGAACGGCACGGTGCAGCCGACGC
TGCTCGTCGAGGCCGCCGAAAAGGCGCTGCACGAACAGCTCGCGGCCGTGACGCCGCACGTGCAGTCGCAGCTCGAGGCA
CGTGCGTACACGGGCGCGCTGTCGGCGCTCGCCGCGCTGCGCGCACCGGTCGATACGTTCTTCAACGACGTGATGGTCAA
CGCCGAGGATCCCGCGCTGCGCGCCAACCGTCTCGCGCTGCTGTTCGCGCTGCATCAGCAGATGAACTGTGTCGCCGACA
TCTCGAAGCTCGCCGCATAA

Upstream 100 bases:

>100_bases
ACCACCGACGCCCAGGACGCCGCGCAGCCGGCATGGGCGCCGCCGCTCAAGGTCGAACGCAAGATCGATCAGGACTGACG
AGACGAGATTGATTCCACAC

Downstream 100 bases:

>100_bases
AGGCCGCACGATGCCGATCAGCCCCAACCGTAAGCTCGTCGTCCTCGACCGGGACGGCGTGATCAACGTCGATTCGGACG
CGTTCATCAAGACGCCCGAC

Product: glycyl-tRNA synthetase subunit beta

Products: NA

Alternate protein names: Glycine--tRNA ligase beta subunit; GlyRS [H]

Number of amino acids: Translated: 699; Mature: 698

Protein sequence:

>699_residues
MTHNHPAPLLVELLTEELPPKALARLGDAFAEGLAQRLAARDLVEGELVFERYATPRRLAVVVQNVRAVAPEKQVREKVL
PVSVALDAEGKPTAPLAKKLAALGHPHLSIADLERAQDGKAEAFFVNYSAAGATLADGLQAALDETLAKLPIPKFMTYQR
PDGTDVKFVRPVHRLTVLHDDRVVPVTAFGIDAGDTTLGHRFLSDGLVAIQHAHAYADTLRDKGRVIAHFADRRETIRTQ
LNEHANGDTVVMPEALLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALTDVGGKLRSRFLIVSNIDTKT
PGEIIEGNERVVRPRLADAKFFFEQDKKKPLADRVPLLANVVYHNKLGSALARVERLEALAGEIAPAIGADAAHAKRAAR
LAKADLLTDMVGEFPELQGTMGTYYARHDGEPDDVALACAEHYQPRFSGDALPTTPVSTAVALADKLETIVGIWGIGLAP
TGEKDPFALRRHALGVLRLLLEKQLPLDLVALLRTAHARFEGVPGVAESTDAIFAFFMDRLRGLLRERGYSAGEVDAVLS
LNPTRVDDLVARLDAVREFTLLAEAEALAAANKRISNILKKSEGGANGTVQPTLLVEAAEKALHEQLAAVTPHVQSQLEA
RAYTGALSALAALRAPVDTFFNDVMVNAEDPALRANRLALLFALHQQMNCVADISKLAA

Sequences:

>Translated_699_residues
MTHNHPAPLLVELLTEELPPKALARLGDAFAEGLAQRLAARDLVEGELVFERYATPRRLAVVVQNVRAVAPEKQVREKVL
PVSVALDAEGKPTAPLAKKLAALGHPHLSIADLERAQDGKAEAFFVNYSAAGATLADGLQAALDETLAKLPIPKFMTYQR
PDGTDVKFVRPVHRLTVLHDDRVVPVTAFGIDAGDTTLGHRFLSDGLVAIQHAHAYADTLRDKGRVIAHFADRRETIRTQ
LNEHANGDTVVMPEALLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALTDVGGKLRSRFLIVSNIDTKT
PGEIIEGNERVVRPRLADAKFFFEQDKKKPLADRVPLLANVVYHNKLGSALARVERLEALAGEIAPAIGADAAHAKRAAR
LAKADLLTDMVGEFPELQGTMGTYYARHDGEPDDVALACAEHYQPRFSGDALPTTPVSTAVALADKLETIVGIWGIGLAP
TGEKDPFALRRHALGVLRLLLEKQLPLDLVALLRTAHARFEGVPGVAESTDAIFAFFMDRLRGLLRERGYSAGEVDAVLS
LNPTRVDDLVARLDAVREFTLLAEAEALAAANKRISNILKKSEGGANGTVQPTLLVEAAEKALHEQLAAVTPHVQSQLEA
RAYTGALSALAALRAPVDTFFNDVMVNAEDPALRANRLALLFALHQQMNCVADISKLAA
>Mature_698_residues
THNHPAPLLVELLTEELPPKALARLGDAFAEGLAQRLAARDLVEGELVFERYATPRRLAVVVQNVRAVAPEKQVREKVLP
VSVALDAEGKPTAPLAKKLAALGHPHLSIADLERAQDGKAEAFFVNYSAAGATLADGLQAALDETLAKLPIPKFMTYQRP
DGTDVKFVRPVHRLTVLHDDRVVPVTAFGIDAGDTTLGHRFLSDGLVAIQHAHAYADTLRDKGRVIAHFADRRETIRTQL
NEHANGDTVVMPEALLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALTDVGGKLRSRFLIVSNIDTKTP
GEIIEGNERVVRPRLADAKFFFEQDKKKPLADRVPLLANVVYHNKLGSALARVERLEALAGEIAPAIGADAAHAKRAARL
AKADLLTDMVGEFPELQGTMGTYYARHDGEPDDVALACAEHYQPRFSGDALPTTPVSTAVALADKLETIVGIWGIGLAPT
GEKDPFALRRHALGVLRLLLEKQLPLDLVALLRTAHARFEGVPGVAESTDAIFAFFMDRLRGLLRERGYSAGEVDAVLSL
NPTRVDDLVARLDAVREFTLLAEAEALAAANKRISNILKKSEGGANGTVQPTLLVEAAEKALHEQLAAVTPHVQSQLEAR
AYTGALSALAALRAPVDTFFNDVMVNAEDPALRANRLALLFALHQQMNCVADISKLAA

Specific function: Unknown

COG id: COG0751

COG function: function code J; Glycyl-tRNA synthetase, beta subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family [H]

Homologues:

Organism=Escherichia coli, GI1789982, Length=691, Percent_Identity=43.9942112879884, Blast_Score=529, Evalue=1e-151,

Paralogues:

None

Copy number: 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 400 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 1,800 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008909
- InterPro:   IPR006194
- InterPro:   IPR015944
- InterPro:   IPR002311 [H]

Pfam domain/function: PF05746 DALR_1; PF02092 tRNA_synt_2f [H]

EC number: =6.1.1.14 [H]

Molecular weight: Translated: 75989; Mature: 75858

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: PS50861 AA_TRNA_LIGASE_II_GLYAB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHNHPAPLLVELLTEELPPKALARLGDAFAEGLAQRLAARDLVEGELVFERYATPRRLA
CCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
VVVQNVRAVAPEKQVREKVLPVSVALDAEGKPTAPLAKKLAALGHPHLSIADLERAQDGK
HHHHHHHHCCCHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHCCCCCCHHHHHHCCCCC
AEAFFVNYSAAGATLADGLQAALDETLAKLPIPKFMTYQRPDGTDVKFVRPVHRLTVLHD
CEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCHHCCHHHHHEEEEC
DRVVPVTAFGIDAGDTTLGHRFLSDGLVAIQHAHAYADTLRDKGRVIAHFADRRETIRTQ
CCEEEEEEECCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHH
LNEHANGDTVVMPEALLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALT
HHHCCCCCEEEECHHHHHHHHHHHHCCCEECCCCCHHHHHCCHHHEEEEEECCCCEEEEE
DVGGKLRSRFLIVSNIDTKTPGEIIEGNERVVRPRLADAKFFFEQDKKKPLADRVPLLAN
CCCHHHHCCEEEEECCCCCCCCHHHCCCCCEECCCHHHHHHHHHHHCCCCCHHHHHHHHH
VVYHNKLGSALARVERLEALAGEIAPAIGADAAHAKRAARLAKADLLTDMVGEFPELQGT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCC
MGTYYARHDGEPDDVALACAEHYQPRFSGDALPTTPVSTAVALADKLETIVGIWGIGLAP
HHHEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
TGEKDPFALRRHALGVLRLLLEKQLPLDLVALLRTAHARFEGVPGVAESTDAIFAFFMDR
CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
LRGLLRERGYSAGEVDAVLSLNPTRVDDLVARLDAVREFTLLAEAEALAAANKRISNILK
HHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSEGGANGTVQPTLLVEAAEKALHEQLAAVTPHVQSQLEARAYTGALSALAALRAPVDTF
HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
FNDVMVNAEDPALRANRLALLFALHQQMNCVADISKLAA
HHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
THNHPAPLLVELLTEELPPKALARLGDAFAEGLAQRLAARDLVEGELVFERYATPRRLA
CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
VVVQNVRAVAPEKQVREKVLPVSVALDAEGKPTAPLAKKLAALGHPHLSIADLERAQDGK
HHHHHHHHCCCHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHCCCCCCHHHHHHCCCCC
AEAFFVNYSAAGATLADGLQAALDETLAKLPIPKFMTYQRPDGTDVKFVRPVHRLTVLHD
CEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCHHCCHHHHHEEEEC
DRVVPVTAFGIDAGDTTLGHRFLSDGLVAIQHAHAYADTLRDKGRVIAHFADRRETIRTQ
CCEEEEEEECCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHH
LNEHANGDTVVMPEALLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALT
HHHCCCCCEEEECHHHHHHHHHHHHCCCEECCCCCHHHHHCCHHHEEEEEECCCCEEEEE
DVGGKLRSRFLIVSNIDTKTPGEIIEGNERVVRPRLADAKFFFEQDKKKPLADRVPLLAN
CCCHHHHCCEEEEECCCCCCCCHHHCCCCCEECCCHHHHHHHHHHHCCCCCHHHHHHHHH
VVYHNKLGSALARVERLEALAGEIAPAIGADAAHAKRAARLAKADLLTDMVGEFPELQGT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCC
MGTYYARHDGEPDDVALACAEHYQPRFSGDALPTTPVSTAVALADKLETIVGIWGIGLAP
HHHEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
TGEKDPFALRRHALGVLRLLLEKQLPLDLVALLRTAHARFEGVPGVAESTDAIFAFFMDR
CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
LRGLLRERGYSAGEVDAVLSLNPTRVDDLVARLDAVREFTLLAEAEALAAANKRISNILK
HHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSEGGANGTVQPTLLVEAAEKALHEQLAAVTPHVQSQLEARAYTGALSALAALRAPVDTF
HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
FNDVMVNAEDPALRANRLALLFALHQQMNCVADISKLAA
HHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA