| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is lnt
Identifier: 115352802
GI number: 115352802
Start: 3029390
End: 3031078
Strand: Direct
Name: lnt
Synonym: Bamb_2751
Alternate gene names: 115352802
Gene position: 3029390-3031078 (Clockwise)
Preceding gene: 115352801
Following gene: 115352804
Centisome position: 85.18
GC content: 70.46
Gene sequence:
>1689_bases ATGGACGATCCGATCCCGTCCCGCCCGGCTGGCGGCCTTCTCGCGCCGGCGCCCGGCCGCGCGCTGCCGCGCTGGCACTA TCCGGCCGCGCTGCTCGCCGGCGCGGCCAATACGCTCGGCTTCGCACCGACCCCGCATGGCGGCTGGCTGCAGCTCGTCG TATTCGTCTGGTTTTTCGCGCAGCTGACGCGCACGTCGAGCTGGCGCGGCGCCGCGCTCACCGGCGGCGCGTTCGGCTTC GGCAACTTCATCACCGGCGTGTGGTGGCTCTACATCAGCATGCACGTGTACGGCGAGATGGCCGCGCCGCTCGCGGGCGG CGCGCTGGTGCTGTTCTCGCTGTACCTGTCGCTGTACCCGGCGTTCTCGGCCGGGCTATGGTCGTTCTGCGCGGGCCACG CGTGGCATCGCCGCGAAGCCGACCCGCGGCCGTTCTCGCCGACCTGGCACGGCGCGTTCGCATTCGCGAGCGCCTGGGCG CTCGGCGAATGGCTGCGCGGCACCGTGTTGACCGGCTTTCCGTGGCTCGCGAGCGGCTATGCGCAGGTCGACGGCCCGTT CGCGGGCTTCGCGCCAGTGGTCGGCGTGTACGGGATCGCCTGGGTGCTCGCGCTGTTCGCCGCGCTGGTCGTGCAGGCGC TCGTCGCCGCGCGCCGGTCGCCCGCCGCTGAACGCGCCGGCGGCAACGCACGCATCCGCATCGCCGCGCCGGCCGGCGTC GCCGTCGCGCTCGTCGCGGCCGGCATCGGGCTGTCGCAGGCCACGTGGACCGTGCCCGCGAACGCGCCGCTCAGCGTGCG GCTGCTGCAGGGCAACGTGAAGCAGGACATCAAGTTCGAGCAGGCGGGCATCGACGCGGCGATCAAGATGTACCAGCAGA TGATCGTCGAGAAGCCCGCCGACCTGATCGTCACGCCGGAGACCGCGATCGCGGTGATGATCCAGGAGCTGCCCGAGCCG TTCGCCGTCGCGATCCGCAAGTTCAGCGACACGACGGGCTCGGCCGTGCTGTTCGGCGCGGTCGGCGCGTCGGTCACGCC CGAAGGCCGCTACGTCGACTACACGAACAGCCTGTACGGCGTGACGCCGCATTCGCGCGACATCTATCACTACGACAAGC ACCATCTCGTGCCCTTCGGCGAATTCATCCCGTGGGGCTTCCGGTGGTTCGTCGACCTGATGAAGATGCCGCTCGGCGAC TTCGCGCGCGGCGCGCCGGTGCAGAAGCCGTTCCTCGTGCACAACCAGCCGGTGATGGCCGACATCTGCTACGAGGACTT GTTCGGCGAGGAAATCGCCGCGACGATCCGCGACAATCCGCAGCCGCCCGGCGTGCTCGTCAACGTGACGAACCTCGCGT GGTTCGGCGACACGATCGCGCTCGACCAGCATCTGCAGATCGCGCGGATGCGCGCGCTCGAGACGGGCCGGCCGATGCTG CGCGCGACCAATACCGGGATGACGGCCGCGATCGACGCGCGCGGCCGCGTGCTCGGCCAGCTGAAACCGTTCACGATCGG CTCGCTCGACCTGCGGATCGAAGGCACGAGCGGGTTCACGCCGTACGTGACGAGCGGCAACAATGTCGTGCTCGCGGTAT CGCTGGTGCTGCTCGCGTTCGGCTTCACGTTCGGGCCGGGCCTGCGCCGCCGCAACGGTTCGAAGGCCGGCGACGACCCC GACCTGTGA
Upstream 100 bases:
>100_bases CGCAACCCGCACGCGAGCCGCCGCGCCGAAACCTCGCACGAAGACTGACCGTCTCGCGCCGCCCGCGTCTCCTTCAACCG CTCGCCCCCTTTCGCTTCAC
Downstream 100 bases:
>100_bases CGCCTCGGCCGGCCGCTCAGGCCGGCCGCTTCGCCTGCGCGGCCAGGCCGCGCAGATCCCGCCCGAGCGCCGCCATCACC GGCGCCCATGCGCCGAACGT
Product: apolipoprotein N-acyltransferase
Products: NA
Alternate protein names: ALP N-acyltransferase [H]
Number of amino acids: Translated: 562; Mature: 562
Protein sequence:
>562_residues MDDPIPSRPAGGLLAPAPGRALPRWHYPAALLAGAANTLGFAPTPHGGWLQLVVFVWFFAQLTRTSSWRGAALTGGAFGF GNFITGVWWLYISMHVYGEMAAPLAGGALVLFSLYLSLYPAFSAGLWSFCAGHAWHRREADPRPFSPTWHGAFAFASAWA LGEWLRGTVLTGFPWLASGYAQVDGPFAGFAPVVGVYGIAWVLALFAALVVQALVAARRSPAAERAGGNARIRIAAPAGV AVALVAAGIGLSQATWTVPANAPLSVRLLQGNVKQDIKFEQAGIDAAIKMYQQMIVEKPADLIVTPETAIAVMIQELPEP FAVAIRKFSDTTGSAVLFGAVGASVTPEGRYVDYTNSLYGVTPHSRDIYHYDKHHLVPFGEFIPWGFRWFVDLMKMPLGD FARGAPVQKPFLVHNQPVMADICYEDLFGEEIAATIRDNPQPPGVLVNVTNLAWFGDTIALDQHLQIARMRALETGRPML RATNTGMTAAIDARGRVLGQLKPFTIGSLDLRIEGTSGFTPYVTSGNNVVLAVSLVLLAFGFTFGPGLRRRNGSKAGDDP DL
Sequences:
>Translated_562_residues MDDPIPSRPAGGLLAPAPGRALPRWHYPAALLAGAANTLGFAPTPHGGWLQLVVFVWFFAQLTRTSSWRGAALTGGAFGF GNFITGVWWLYISMHVYGEMAAPLAGGALVLFSLYLSLYPAFSAGLWSFCAGHAWHRREADPRPFSPTWHGAFAFASAWA LGEWLRGTVLTGFPWLASGYAQVDGPFAGFAPVVGVYGIAWVLALFAALVVQALVAARRSPAAERAGGNARIRIAAPAGV AVALVAAGIGLSQATWTVPANAPLSVRLLQGNVKQDIKFEQAGIDAAIKMYQQMIVEKPADLIVTPETAIAVMIQELPEP FAVAIRKFSDTTGSAVLFGAVGASVTPEGRYVDYTNSLYGVTPHSRDIYHYDKHHLVPFGEFIPWGFRWFVDLMKMPLGD FARGAPVQKPFLVHNQPVMADICYEDLFGEEIAATIRDNPQPPGVLVNVTNLAWFGDTIALDQHLQIARMRALETGRPML RATNTGMTAAIDARGRVLGQLKPFTIGSLDLRIEGTSGFTPYVTSGNNVVLAVSLVLLAFGFTFGPGLRRRNGSKAGDDP DL >Mature_562_residues MDDPIPSRPAGGLLAPAPGRALPRWHYPAALLAGAANTLGFAPTPHGGWLQLVVFVWFFAQLTRTSSWRGAALTGGAFGF GNFITGVWWLYISMHVYGEMAAPLAGGALVLFSLYLSLYPAFSAGLWSFCAGHAWHRREADPRPFSPTWHGAFAFASAWA LGEWLRGTVLTGFPWLASGYAQVDGPFAGFAPVVGVYGIAWVLALFAALVVQALVAARRSPAAERAGGNARIRIAAPAGV AVALVAAGIGLSQATWTVPANAPLSVRLLQGNVKQDIKFEQAGIDAAIKMYQQMIVEKPADLIVTPETAIAVMIQELPEP FAVAIRKFSDTTGSAVLFGAVGASVTPEGRYVDYTNSLYGVTPHSRDIYHYDKHHLVPFGEFIPWGFRWFVDLMKMPLGD FARGAPVQKPFLVHNQPVMADICYEDLFGEEIAATIRDNPQPPGVLVNVTNLAWFGDTIALDQHLQIARMRALETGRPML RATNTGMTAAIDARGRVLGQLKPFTIGSLDLRIEGTSGFTPYVTSGNNVVLAVSLVLLAFGFTFGPGLRRRNGSKAGDDP DL
Specific function: Transfers the fatty acyl group on membrane lipoproteins [H]
COG id: COG0815
COG function: function code M; Apolipoprotein N-acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
Organism=Escherichia coli, GI1786878, Length=508, Percent_Identity=34.251968503937, Blast_Score=249, Evalue=3e-67,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004563 - InterPro: IPR003010 [H]
Pfam domain/function: PF00795 CN_hydrolase [H]
EC number: 2.3.1.- [C]
Molecular weight: Translated: 60359; Mature: 60359
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDPIPSRPAGGLLAPAPGRALPRWHYPAALLAGAANTLGFAPTPHGGWLQLVVFVWFFA CCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHH QLTRTSSWRGAALTGGAFGFGNFITGVWWLYISMHVYGEMAAPLAGGALVLFSLYLSLYP HHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH AFSAGLWSFCAGHAWHRREADPRPFSPTWHGAFAFASAWALGEWLRGTVLTGFPWLASGY HHHHHHHHHHHCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHCCCHHHHCCC AQVDGPFAGFAPVVGVYGIAWVLALFAALVVQALVAARRSPAAERAGGNARIRIAAPAGV HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEEEEECCCCH AVALVAAGIGLSQATWTVPANAPLSVRLLQGNVKQDIKFEQAGIDAAIKMYQQMIVEKPA HHHHHHHCCCCCCCEEEECCCCCEEEEEECCCCCCCCCHHHHCHHHHHHHHHHHHHCCCC DLIVTPETAIAVMIQELPEPFAVAIRKFSDTTGSAVLFGAVGASVTPEGRYVDYTNSLYG CEEECCHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEECCCEEE VTPHSRDIYHYDKHHLVPFGEFIPWGFRWFVDLMKMPLGDFARGAPVQKPFLVHNQPVMA CCCCCCCCEECCCCCCCCCHHHCCHHHHHHHHHHHCCCCHHHCCCCCCCCEEECCCCHHH DICYEDLFGEEIAATIRDNPQPPGVLVNVTNLAWFGDTIALDQHLQIARMRALETGRPML HHHHHHHCCHHHHHHHCCCCCCCCEEEEECEEEEECCHHHHHHHHHHHHHHHHHCCCCEE RATNTGMTAAIDARGRVLGQLKPFTIGSLDLRIEGTSGFTPYVTSGNNVVLAVSLVLLAF EECCCCCEEEECCCCHHHHCCCCEEECEEEEEEECCCCCCCEEECCCCEEHHHHHHHHHH GFTFGPGLRRRNGSKAGDDPDL HHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDDPIPSRPAGGLLAPAPGRALPRWHYPAALLAGAANTLGFAPTPHGGWLQLVVFVWFFA CCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHH QLTRTSSWRGAALTGGAFGFGNFITGVWWLYISMHVYGEMAAPLAGGALVLFSLYLSLYP HHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH AFSAGLWSFCAGHAWHRREADPRPFSPTWHGAFAFASAWALGEWLRGTVLTGFPWLASGY HHHHHHHHHHHCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHCCCHHHHCCC AQVDGPFAGFAPVVGVYGIAWVLALFAALVVQALVAARRSPAAERAGGNARIRIAAPAGV HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEEEEECCCCH AVALVAAGIGLSQATWTVPANAPLSVRLLQGNVKQDIKFEQAGIDAAIKMYQQMIVEKPA HHHHHHHCCCCCCCEEEECCCCCEEEEEECCCCCCCCCHHHHCHHHHHHHHHHHHHCCCC DLIVTPETAIAVMIQELPEPFAVAIRKFSDTTGSAVLFGAVGASVTPEGRYVDYTNSLYG CEEECCHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEECCCEEE VTPHSRDIYHYDKHHLVPFGEFIPWGFRWFVDLMKMPLGDFARGAPVQKPFLVHNQPVMA CCCCCCCCEECCCCCCCCCHHHCCHHHHHHHHHHHCCCCHHHCCCCCCCCEEECCCCHHH DICYEDLFGEEIAATIRDNPQPPGVLVNVTNLAWFGDTIALDQHLQIARMRALETGRPML HHHHHHHCCHHHHHHHCCCCCCCCEEEEECEEEEECCHHHHHHHHHHHHHHHHHCCCCEE RATNTGMTAAIDARGRVLGQLKPFTIGSLDLRIEGTSGFTPYVTSGNNVVLAVSLVLLAF EECCCCCEEEECCCCHHHHCCCCEEECEEEEEEECCCCCCCEEECCCCEEHHHHHHHHHH GFTFGPGLRRRNGSKAGDDPDL HHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Acyltransferases; Transferring groups other than amino-acyl groups [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]