Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is lnt

Identifier: 115352802

GI number: 115352802

Start: 3029390

End: 3031078

Strand: Direct

Name: lnt

Synonym: Bamb_2751

Alternate gene names: 115352802

Gene position: 3029390-3031078 (Clockwise)

Preceding gene: 115352801

Following gene: 115352804

Centisome position: 85.18

GC content: 70.46

Gene sequence:

>1689_bases
ATGGACGATCCGATCCCGTCCCGCCCGGCTGGCGGCCTTCTCGCGCCGGCGCCCGGCCGCGCGCTGCCGCGCTGGCACTA
TCCGGCCGCGCTGCTCGCCGGCGCGGCCAATACGCTCGGCTTCGCACCGACCCCGCATGGCGGCTGGCTGCAGCTCGTCG
TATTCGTCTGGTTTTTCGCGCAGCTGACGCGCACGTCGAGCTGGCGCGGCGCCGCGCTCACCGGCGGCGCGTTCGGCTTC
GGCAACTTCATCACCGGCGTGTGGTGGCTCTACATCAGCATGCACGTGTACGGCGAGATGGCCGCGCCGCTCGCGGGCGG
CGCGCTGGTGCTGTTCTCGCTGTACCTGTCGCTGTACCCGGCGTTCTCGGCCGGGCTATGGTCGTTCTGCGCGGGCCACG
CGTGGCATCGCCGCGAAGCCGACCCGCGGCCGTTCTCGCCGACCTGGCACGGCGCGTTCGCATTCGCGAGCGCCTGGGCG
CTCGGCGAATGGCTGCGCGGCACCGTGTTGACCGGCTTTCCGTGGCTCGCGAGCGGCTATGCGCAGGTCGACGGCCCGTT
CGCGGGCTTCGCGCCAGTGGTCGGCGTGTACGGGATCGCCTGGGTGCTCGCGCTGTTCGCCGCGCTGGTCGTGCAGGCGC
TCGTCGCCGCGCGCCGGTCGCCCGCCGCTGAACGCGCCGGCGGCAACGCACGCATCCGCATCGCCGCGCCGGCCGGCGTC
GCCGTCGCGCTCGTCGCGGCCGGCATCGGGCTGTCGCAGGCCACGTGGACCGTGCCCGCGAACGCGCCGCTCAGCGTGCG
GCTGCTGCAGGGCAACGTGAAGCAGGACATCAAGTTCGAGCAGGCGGGCATCGACGCGGCGATCAAGATGTACCAGCAGA
TGATCGTCGAGAAGCCCGCCGACCTGATCGTCACGCCGGAGACCGCGATCGCGGTGATGATCCAGGAGCTGCCCGAGCCG
TTCGCCGTCGCGATCCGCAAGTTCAGCGACACGACGGGCTCGGCCGTGCTGTTCGGCGCGGTCGGCGCGTCGGTCACGCC
CGAAGGCCGCTACGTCGACTACACGAACAGCCTGTACGGCGTGACGCCGCATTCGCGCGACATCTATCACTACGACAAGC
ACCATCTCGTGCCCTTCGGCGAATTCATCCCGTGGGGCTTCCGGTGGTTCGTCGACCTGATGAAGATGCCGCTCGGCGAC
TTCGCGCGCGGCGCGCCGGTGCAGAAGCCGTTCCTCGTGCACAACCAGCCGGTGATGGCCGACATCTGCTACGAGGACTT
GTTCGGCGAGGAAATCGCCGCGACGATCCGCGACAATCCGCAGCCGCCCGGCGTGCTCGTCAACGTGACGAACCTCGCGT
GGTTCGGCGACACGATCGCGCTCGACCAGCATCTGCAGATCGCGCGGATGCGCGCGCTCGAGACGGGCCGGCCGATGCTG
CGCGCGACCAATACCGGGATGACGGCCGCGATCGACGCGCGCGGCCGCGTGCTCGGCCAGCTGAAACCGTTCACGATCGG
CTCGCTCGACCTGCGGATCGAAGGCACGAGCGGGTTCACGCCGTACGTGACGAGCGGCAACAATGTCGTGCTCGCGGTAT
CGCTGGTGCTGCTCGCGTTCGGCTTCACGTTCGGGCCGGGCCTGCGCCGCCGCAACGGTTCGAAGGCCGGCGACGACCCC
GACCTGTGA

Upstream 100 bases:

>100_bases
CGCAACCCGCACGCGAGCCGCCGCGCCGAAACCTCGCACGAAGACTGACCGTCTCGCGCCGCCCGCGTCTCCTTCAACCG
CTCGCCCCCTTTCGCTTCAC

Downstream 100 bases:

>100_bases
CGCCTCGGCCGGCCGCTCAGGCCGGCCGCTTCGCCTGCGCGGCCAGGCCGCGCAGATCCCGCCCGAGCGCCGCCATCACC
GGCGCCCATGCGCCGAACGT

Product: apolipoprotein N-acyltransferase

Products: NA

Alternate protein names: ALP N-acyltransferase [H]

Number of amino acids: Translated: 562; Mature: 562

Protein sequence:

>562_residues
MDDPIPSRPAGGLLAPAPGRALPRWHYPAALLAGAANTLGFAPTPHGGWLQLVVFVWFFAQLTRTSSWRGAALTGGAFGF
GNFITGVWWLYISMHVYGEMAAPLAGGALVLFSLYLSLYPAFSAGLWSFCAGHAWHRREADPRPFSPTWHGAFAFASAWA
LGEWLRGTVLTGFPWLASGYAQVDGPFAGFAPVVGVYGIAWVLALFAALVVQALVAARRSPAAERAGGNARIRIAAPAGV
AVALVAAGIGLSQATWTVPANAPLSVRLLQGNVKQDIKFEQAGIDAAIKMYQQMIVEKPADLIVTPETAIAVMIQELPEP
FAVAIRKFSDTTGSAVLFGAVGASVTPEGRYVDYTNSLYGVTPHSRDIYHYDKHHLVPFGEFIPWGFRWFVDLMKMPLGD
FARGAPVQKPFLVHNQPVMADICYEDLFGEEIAATIRDNPQPPGVLVNVTNLAWFGDTIALDQHLQIARMRALETGRPML
RATNTGMTAAIDARGRVLGQLKPFTIGSLDLRIEGTSGFTPYVTSGNNVVLAVSLVLLAFGFTFGPGLRRRNGSKAGDDP
DL

Sequences:

>Translated_562_residues
MDDPIPSRPAGGLLAPAPGRALPRWHYPAALLAGAANTLGFAPTPHGGWLQLVVFVWFFAQLTRTSSWRGAALTGGAFGF
GNFITGVWWLYISMHVYGEMAAPLAGGALVLFSLYLSLYPAFSAGLWSFCAGHAWHRREADPRPFSPTWHGAFAFASAWA
LGEWLRGTVLTGFPWLASGYAQVDGPFAGFAPVVGVYGIAWVLALFAALVVQALVAARRSPAAERAGGNARIRIAAPAGV
AVALVAAGIGLSQATWTVPANAPLSVRLLQGNVKQDIKFEQAGIDAAIKMYQQMIVEKPADLIVTPETAIAVMIQELPEP
FAVAIRKFSDTTGSAVLFGAVGASVTPEGRYVDYTNSLYGVTPHSRDIYHYDKHHLVPFGEFIPWGFRWFVDLMKMPLGD
FARGAPVQKPFLVHNQPVMADICYEDLFGEEIAATIRDNPQPPGVLVNVTNLAWFGDTIALDQHLQIARMRALETGRPML
RATNTGMTAAIDARGRVLGQLKPFTIGSLDLRIEGTSGFTPYVTSGNNVVLAVSLVLLAFGFTFGPGLRRRNGSKAGDDP
DL
>Mature_562_residues
MDDPIPSRPAGGLLAPAPGRALPRWHYPAALLAGAANTLGFAPTPHGGWLQLVVFVWFFAQLTRTSSWRGAALTGGAFGF
GNFITGVWWLYISMHVYGEMAAPLAGGALVLFSLYLSLYPAFSAGLWSFCAGHAWHRREADPRPFSPTWHGAFAFASAWA
LGEWLRGTVLTGFPWLASGYAQVDGPFAGFAPVVGVYGIAWVLALFAALVVQALVAARRSPAAERAGGNARIRIAAPAGV
AVALVAAGIGLSQATWTVPANAPLSVRLLQGNVKQDIKFEQAGIDAAIKMYQQMIVEKPADLIVTPETAIAVMIQELPEP
FAVAIRKFSDTTGSAVLFGAVGASVTPEGRYVDYTNSLYGVTPHSRDIYHYDKHHLVPFGEFIPWGFRWFVDLMKMPLGD
FARGAPVQKPFLVHNQPVMADICYEDLFGEEIAATIRDNPQPPGVLVNVTNLAWFGDTIALDQHLQIARMRALETGRPML
RATNTGMTAAIDARGRVLGQLKPFTIGSLDLRIEGTSGFTPYVTSGNNVVLAVSLVLLAFGFTFGPGLRRRNGSKAGDDP
DL

Specific function: Transfers the fatty acyl group on membrane lipoproteins [H]

COG id: COG0815

COG function: function code M; Apolipoprotein N-acyltransferase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CN hydrolase domain [H]

Homologues:

Organism=Escherichia coli, GI1786878, Length=508, Percent_Identity=34.251968503937, Blast_Score=249, Evalue=3e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004563
- InterPro:   IPR003010 [H]

Pfam domain/function: PF00795 CN_hydrolase [H]

EC number: 2.3.1.- [C]

Molecular weight: Translated: 60359; Mature: 60359

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: PS50263 CN_HYDROLASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDPIPSRPAGGLLAPAPGRALPRWHYPAALLAGAANTLGFAPTPHGGWLQLVVFVWFFA
CCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHH
QLTRTSSWRGAALTGGAFGFGNFITGVWWLYISMHVYGEMAAPLAGGALVLFSLYLSLYP
HHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
AFSAGLWSFCAGHAWHRREADPRPFSPTWHGAFAFASAWALGEWLRGTVLTGFPWLASGY
HHHHHHHHHHHCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHCCCHHHHCCC
AQVDGPFAGFAPVVGVYGIAWVLALFAALVVQALVAARRSPAAERAGGNARIRIAAPAGV
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEEEEECCCCH
AVALVAAGIGLSQATWTVPANAPLSVRLLQGNVKQDIKFEQAGIDAAIKMYQQMIVEKPA
HHHHHHHCCCCCCCEEEECCCCCEEEEEECCCCCCCCCHHHHCHHHHHHHHHHHHHCCCC
DLIVTPETAIAVMIQELPEPFAVAIRKFSDTTGSAVLFGAVGASVTPEGRYVDYTNSLYG
CEEECCHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEECCCEEE
VTPHSRDIYHYDKHHLVPFGEFIPWGFRWFVDLMKMPLGDFARGAPVQKPFLVHNQPVMA
CCCCCCCCEECCCCCCCCCHHHCCHHHHHHHHHHHCCCCHHHCCCCCCCCEEECCCCHHH
DICYEDLFGEEIAATIRDNPQPPGVLVNVTNLAWFGDTIALDQHLQIARMRALETGRPML
HHHHHHHCCHHHHHHHCCCCCCCCEEEEECEEEEECCHHHHHHHHHHHHHHHHHCCCCEE
RATNTGMTAAIDARGRVLGQLKPFTIGSLDLRIEGTSGFTPYVTSGNNVVLAVSLVLLAF
EECCCCCEEEECCCCHHHHCCCCEEECEEEEEEECCCCCCCEEECCCCEEHHHHHHHHHH
GFTFGPGLRRRNGSKAGDDPDL
HHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDDPIPSRPAGGLLAPAPGRALPRWHYPAALLAGAANTLGFAPTPHGGWLQLVVFVWFFA
CCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHH
QLTRTSSWRGAALTGGAFGFGNFITGVWWLYISMHVYGEMAAPLAGGALVLFSLYLSLYP
HHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
AFSAGLWSFCAGHAWHRREADPRPFSPTWHGAFAFASAWALGEWLRGTVLTGFPWLASGY
HHHHHHHHHHHCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHCCCHHHHCCC
AQVDGPFAGFAPVVGVYGIAWVLALFAALVVQALVAARRSPAAERAGGNARIRIAAPAGV
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEEEEECCCCH
AVALVAAGIGLSQATWTVPANAPLSVRLLQGNVKQDIKFEQAGIDAAIKMYQQMIVEKPA
HHHHHHHCCCCCCCEEEECCCCCEEEEEECCCCCCCCCHHHHCHHHHHHHHHHHHHCCCC
DLIVTPETAIAVMIQELPEPFAVAIRKFSDTTGSAVLFGAVGASVTPEGRYVDYTNSLYG
CEEECCHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEECCCEEE
VTPHSRDIYHYDKHHLVPFGEFIPWGFRWFVDLMKMPLGDFARGAPVQKPFLVHNQPVMA
CCCCCCCCEECCCCCCCCCHHHCCHHHHHHHHHHHCCCCHHHCCCCCCCCEEECCCCHHH
DICYEDLFGEEIAATIRDNPQPPGVLVNVTNLAWFGDTIALDQHLQIARMRALETGRPML
HHHHHHHCCHHHHHHHCCCCCCCCEEEEECEEEEECCHHHHHHHHHHHHHHHHHCCCCEE
RATNTGMTAAIDARGRVLGQLKPFTIGSLDLRIEGTSGFTPYVTSGNNVVLAVSLVLLAF
EECCCCCEEEECCCCHHHHCCCCEEECEEEEEEECCCCCCCEEECCCCEEHHHHHHHHHH
GFTFGPGLRRRNGSKAGDDPDL
HHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Transferases; Acyltransferases; Transferring groups other than amino-acyl groups [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]