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The map label for this gene is corC [H]

Identifier: 115352801

GI number: 115352801

Start: 3028450

End: 3029337

Strand: Direct

Name: corC [H]

Synonym: Bamb_2750

Alternate gene names: 115352801

Gene position: 3028450-3029337 (Clockwise)

Preceding gene: 115352800

Following gene: 115352802

Centisome position: 85.15

GC content: 63.63

Gene sequence:

>888_bases
ATGAACGATTCGTATCCCAGTCGTAAGCTCACCGACAAACCGCAAGAAAAGCGCTCGCTGCTCGAGCGCCTGACCGACTT
CATCTCGCCCGAGCCGGAATCCCGGACCGAGCTGCTGGAAATCCTCCAGGACGCCCACGAACGCAACCTGATCGACGCCG
ATTCGCTGTCGATGATCGAAGGTGTGTTCCAGGTGTCCGACCTGTGCGCCCGCGACATCATGGTGCCGCGCGCGCAGATG
GACGCGATCAACATCGCCGACAAGCCTGAAGACTTCATCCCGTTCGTCCTCGAGAAAGCGCACTCGCGCTACCCCGTGTT
CGAGGAGAACCGCGACAACGTGATCGGCGTGCTGCTCGCGAAAGACCTGCTGCGCTTCTATGCCGAAGAGGAATTCGACG
TGCGCGGGATGCTGCGCCCCGCCGTGTTCATCCCCGAATCGAAGCGCCTGAACGTGCTGCTGCACGACTTCCGCGTGAAC
CGCAACCACCTCGCGATCGTCGTCGACGAATACGGCGGCGTCGCGGGCCTGATCACGATCGAGGACGTGCTCGAACAGAT
CGTCGGCGACATCGAGGACGAATACGACTTCGACGAAGAGGCCGGCAACATCATCTCGGGGCCGGACGGCCGCTACCGCG
TGCGCGCGCTCACCGAGATCGAACAGTTCAACGAATCGTTCGGCACCGACTTCCCCGACGACGAAGTCGACACGATCGGC
GGGCTGATCACCCATCATTTCGGCCGCGTGCCGCACCGCGGCGAGAAGCTGCAGCTCGGCAACCTCGTGTTCGAGATCCA
GCGCGGCGATGCGCGCCAGGTCCACGTGCTGCTGGTGCGCCGCAACCCGCACGCGAGCCGCCGCGCCGAAACCTCGCACG
AAGACTGA

Upstream 100 bases:

>100_bases
CCCCGGCCGGACGGCCGGGGTGACACGGCCGCGCCATGCCCTTGGTGTATCCTTGCCTACTCCGTGACCGCGCGCCCCGG
CATGACCCGGGCGCACCACC

Downstream 100 bases:

>100_bases
CCGTCTCGCGCCGCCCGCGTCTCCTTCAACCGCTCGCCCCCTTTCGCTTCACATGGACGATCCGATCCCGTCCCGCCCGG
CTGGCGGCCTTCTCGCGCCG

Product: transport-associated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MNDSYPSRKLTDKPQEKRSLLERLTDFISPEPESRTELLEILQDAHERNLIDADSLSMIEGVFQVSDLCARDIMVPRAQM
DAINIADKPEDFIPFVLEKAHSRYPVFEENRDNVIGVLLAKDLLRFYAEEEFDVRGMLRPAVFIPESKRLNVLLHDFRVN
RNHLAIVVDEYGGVAGLITIEDVLEQIVGDIEDEYDFDEEAGNIISGPDGRYRVRALTEIEQFNESFGTDFPDDEVDTIG
GLITHHFGRVPHRGEKLQLGNLVFEIQRGDARQVHVLLVRRNPHASRRAETSHED

Sequences:

>Translated_295_residues
MNDSYPSRKLTDKPQEKRSLLERLTDFISPEPESRTELLEILQDAHERNLIDADSLSMIEGVFQVSDLCARDIMVPRAQM
DAINIADKPEDFIPFVLEKAHSRYPVFEENRDNVIGVLLAKDLLRFYAEEEFDVRGMLRPAVFIPESKRLNVLLHDFRVN
RNHLAIVVDEYGGVAGLITIEDVLEQIVGDIEDEYDFDEEAGNIISGPDGRYRVRALTEIEQFNESFGTDFPDDEVDTIG
GLITHHFGRVPHRGEKLQLGNLVFEIQRGDARQVHVLLVRRNPHASRRAETSHED
>Mature_295_residues
MNDSYPSRKLTDKPQEKRSLLERLTDFISPEPESRTELLEILQDAHERNLIDADSLSMIEGVFQVSDLCARDIMVPRAQM
DAINIADKPEDFIPFVLEKAHSRYPVFEENRDNVIGVLLAKDLLRFYAEEEFDVRGMLRPAVFIPESKRLNVLLHDFRVN
RNHLAIVVDEYGGVAGLITIEDVLEQIVGDIEDEYDFDEEAGNIISGPDGRYRVRALTEIEQFNESFGTDFPDDEVDTIG
GLITHHFGRVPHRGEKLQLGNLVFEIQRGDARQVHVLLVRRNPHASRRAETSHED

Specific function: Plays a role in the transport of magnesium and cobalt ions [H]

COG id: COG4535

COG function: function code P; Putative Mg2+ and Co2+ transporter CorC

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=225, Percent_Identity=29.7777777777778, Blast_Score=113, Evalue=2e-25,
Organism=Homo sapiens, GI94681046, Length=179, Percent_Identity=29.0502793296089, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI40068055, Length=179, Percent_Identity=27.9329608938547, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI40068053, Length=179, Percent_Identity=27.9329608938547, Blast_Score=68, Evalue=1e-11,
Organism=Escherichia coli, GI1786879, Length=288, Percent_Identity=41.3194444444444, Blast_Score=210, Evalue=7e-56,
Organism=Escherichia coli, GI145693175, Length=263, Percent_Identity=27.7566539923954, Blast_Score=111, Evalue=6e-26,
Organism=Escherichia coli, GI87082033, Length=246, Percent_Identity=27.6422764227642, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1788119, Length=231, Percent_Identity=29.8701298701299, Blast_Score=81, Evalue=7e-17,
Organism=Escherichia coli, GI1790664, Length=232, Percent_Identity=25.4310344827586, Blast_Score=78, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC [H]

EC number: NA

Molecular weight: Translated: 33774; Mature: 33774

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDSYPSRKLTDKPQEKRSLLERLTDFISPEPESRTELLEILQDAHERNLIDADSLSMIE
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHH
GVFQVSDLCARDIMVPRAQMDAINIADKPEDFIPFVLEKAHSRYPVFEENRDNVIGVLLA
HHHHHHHHHHHHHCCCCHHHCEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHH
KDLLRFYAEEEFDVRGMLRPAVFIPESKRLNVLLHDFRVNRNHLAIVVDEYGGVAGLITI
HHHHHHHCCCCCCHHHHCCCEEECCCCCCCEEEEEEEEECCCEEEEEEECCCCEEEEEEH
EDVLEQIVGDIEDEYDFDEEAGNIISGPDGRYRVRALTEIEQFNESFGTDFPDDEVDTIG
HHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCHHHHHH
GLITHHFGRVPHRGEKLQLGNLVFEIQRGDARQVHVLLVRRNPHASRRAETSHED
HHHHHHHCCCCCCCCEEEECCEEEEEECCCCCEEEEEEEECCCCCHHHCCCCCCC
>Mature Secondary Structure
MNDSYPSRKLTDKPQEKRSLLERLTDFISPEPESRTELLEILQDAHERNLIDADSLSMIE
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHH
GVFQVSDLCARDIMVPRAQMDAINIADKPEDFIPFVLEKAHSRYPVFEENRDNVIGVLLA
HHHHHHHHHHHHHCCCCHHHCEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHH
KDLLRFYAEEEFDVRGMLRPAVFIPESKRLNVLLHDFRVNRNHLAIVVDEYGGVAGLITI
HHHHHHHCCCCCCHHHHCCCEEECCCCCCCEEEEEEEEECCCEEEEEEECCCCEEEEEEH
EDVLEQIVGDIEDEYDFDEEAGNIISGPDGRYRVRALTEIEQFNESFGTDFPDDEVDTIG
HHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCHHHHHH
GLITHHFGRVPHRGEKLQLGNLVFEIQRGDARQVHVLLVRRNPHASRRAETSHED
HHHHHHHCCCCCCCCEEEECCEEEEEECCCCCEEEEEEEECCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12089438 [H]