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The map label for this gene is yrbE [H]

Identifier: 115352791

GI number: 115352791

Start: 3017366

End: 3018352

Strand: Direct

Name: yrbE [H]

Synonym: Bamb_2740

Alternate gene names: 115352791

Gene position: 3017366-3018352 (Clockwise)

Preceding gene: 115352790

Following gene: 115352792

Centisome position: 84.84

GC content: 69.6

Gene sequence:

>987_bases
ATGATCGAATTCGCTTTGTTCGGTGCGGGAAGAATCGGGAAGATCCACGCGGCGAATCTGGCGCGCCACCCGGGCGCGAA
ACTCAAGTACGTGGTCGATCGGCATGCGCCGTCGGCCGACGCGCTCGCGCATGCGCACGGCGCGCAGGTCGCCGACATCG
AACGCGCGCTCGGCGACACGTCCGTGCAGGCCGTCGTGATTGCATCGAGCACCGATACGCACGCAGACCTGATCGTGGCG
GCGGCGAACGCGGGCAAGGCCGTGTTCTGCGAGAAGCCGGTCGACCTGAGCGTCGCACGCTCGCGCGAATGCGCGGAGGT
CGTGCGCCGCCGCGGCATCACCTGCATGATCGGCTTCCAGCGCCGCTTCGACCCGACCTTCGCCGCGCTGAAGGCGCGCG
TCGAGCGCGGCGACATCGGCGCGCCGGAAATGCTGGTCGTCACGAGCCGCGACCCTGGCGCGCCGCCCGTCGACTACATC
CGCAGCTCGGGCGGCATCTTCAAGGACATGCTGATCCACGACTTCGACGTGTTCCGCTGGATCCTCGGCGACGAAGCGCA
GACGCTGCATGCGACCGGCAGCTGCCTGACCGATCCGGCCGTGGGCGACGCCGGCGACCTCGATTCGACCGCCGTGACGA
TCCGCACGCGGCGCGGCCTGCTGTGCCAGATCAATACGTCGCGCCGCGCGGCGTACGGCTACGACCAGCGCTTCGAGCTG
CTCGGCAGCAAAGGCATGCTGCAGGCCGGCAACGTGCGGCCGACCGAAGTGACCGCGTGGTCGGCGAACGGCGTCGCCAC
CGACGTGCCGGAGCCGTTCTTCCTTGAGCGCTACCGGCACGCCTACGCGGCCGAGATCGCGCACTTCGTCGATGCGCTGC
GCGACGGCACGCCGGTCAGGACGACGATCGACGACGGGCTCGCCGCGCTCGAGCTGGCGGAGGCCGCGATGAAGTCGTGG
CAGACGGGGCGCGTGATCGAGGTGTGA

Upstream 100 bases:

>100_bases
CGCTGCCGGGCCGTTCGCAGACCGGCGTGAACATCGGCATCAACCATTCGTTCTGACGCCGCGCGCTGTCGGAACCCAAC
GGAGTCAACAGGAGAACGAC

Downstream 100 bases:

>100_bases
CGTGCACGGCGGCGCCGTGCGGCGATACCGTGCCGCGTCCGGTACGCCGGATCGATCCGACCGCGCAAGCAGCTCGCCGA
ACGGTGCGCGGCACGGCCGC

Product: inositol 2-dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MIEFALFGAGRIGKIHAANLARHPGAKLKYVVDRHAPSADALAHAHGAQVADIERALGDTSVQAVVIASSTDTHADLIVA
AANAGKAVFCEKPVDLSVARSRECAEVVRRRGITCMIGFQRRFDPTFAALKARVERGDIGAPEMLVVTSRDPGAPPVDYI
RSSGGIFKDMLIHDFDVFRWILGDEAQTLHATGSCLTDPAVGDAGDLDSTAVTIRTRRGLLCQINTSRRAAYGYDQRFEL
LGSKGMLQAGNVRPTEVTAWSANGVATDVPEPFFLERYRHAYAAEIAHFVDALRDGTPVRTTIDDGLAALELAEAAMKSW
QTGRVIEV

Sequences:

>Translated_328_residues
MIEFALFGAGRIGKIHAANLARHPGAKLKYVVDRHAPSADALAHAHGAQVADIERALGDTSVQAVVIASSTDTHADLIVA
AANAGKAVFCEKPVDLSVARSRECAEVVRRRGITCMIGFQRRFDPTFAALKARVERGDIGAPEMLVVTSRDPGAPPVDYI
RSSGGIFKDMLIHDFDVFRWILGDEAQTLHATGSCLTDPAVGDAGDLDSTAVTIRTRRGLLCQINTSRRAAYGYDQRFEL
LGSKGMLQAGNVRPTEVTAWSANGVATDVPEPFFLERYRHAYAAEIAHFVDALRDGTPVRTTIDDGLAALELAEAAMKSW
QTGRVIEV
>Mature_328_residues
MIEFALFGAGRIGKIHAANLARHPGAKLKYVVDRHAPSADALAHAHGAQVADIERALGDTSVQAVVIASSTDTHADLIVA
AANAGKAVFCEKPVDLSVARSRECAEVVRRRGITCMIGFQRRFDPTFAALKARVERGDIGAPEMLVVTSRDPGAPPVDYI
RSSGGIFKDMLIHDFDVFRWILGDEAQTLHATGSCLTDPAVGDAGDLDSTAVTIRTRRGLLCQINTSRRAAYGYDQRFEL
LGSKGMLQAGNVRPTEVTAWSANGVATDVPEPFFLERYRHAYAAEIAHFVDALRDGTPVRTTIDDGLAALELAEAAMKSW
QTGRVIEV

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI1789848, Length=168, Percent_Identity=27.9761904761905, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 35323; Mature: 35323

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEFALFGAGRIGKIHAANLARHPGAKLKYVVDRHAPSADALAHAHGAQVADIERALGDT
CEEEEEECCCCCCEEEEHHHCCCCCCCEEEEEECCCCCHHHHHHHCCCHHHHHHHHHCCC
SVQAVVIASSTDTHADLIVAAANAGKAVFCEKPVDLSVARSRECAEVVRRRGITCMIGFQ
CEEEEEEECCCCCCCEEEEEECCCCCEEEECCCCCCHHHCCHHHHHHHHHCCCEEEEECC
RRFDPTFAALKARVERGDIGAPEMLVVTSRDPGAPPVDYIRSSGGIFKDMLIHDFDVFRW
CCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHH
ILGDEAQTLHATGSCLTDPAVGDAGDLDSTAVTIRTRRGLLCQINTSRRAAYGYDQRFEL
HHCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCCCHHHHH
LGSKGMLQAGNVRPTEVTAWSANGVATDVPEPFFLERYRHAYAAEIAHFVDALRDGTPVR
HCCCCCEECCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
TTIDDGLAALELAEAAMKSWQTGRVIEV
EEHHHHHHHHHHHHHHHHCCCCCCEEEC
>Mature Secondary Structure
MIEFALFGAGRIGKIHAANLARHPGAKLKYVVDRHAPSADALAHAHGAQVADIERALGDT
CEEEEEECCCCCCEEEEHHHCCCCCCCEEEEEECCCCCHHHHHHHCCCHHHHHHHHHCCC
SVQAVVIASSTDTHADLIVAAANAGKAVFCEKPVDLSVARSRECAEVVRRRGITCMIGFQ
CEEEEEEECCCCCCCEEEEEECCCCCEEEECCCCCCHHHCCHHHHHHHHHCCCEEEEECC
RRFDPTFAALKARVERGDIGAPEMLVVTSRDPGAPPVDYIRSSGGIFKDMLIHDFDVFRW
CCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHH
ILGDEAQTLHATGSCLTDPAVGDAGDLDSTAVTIRTRRGLLCQINTSRRAAYGYDQRFEL
HHCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCCCHHHHH
LGSKGMLQAGNVRPTEVTAWSANGVATDVPEPFFLERYRHAYAAEIAHFVDALRDGTPVR
HCCCCCEECCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
TTIDDGLAALELAEAAMKSWQTGRVIEV
EEHHHHHHHHHHHHHHHHCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 9025289 [H]