Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115352788

Identifier: 115352788

GI number: 115352788

Start: 3015185

End: 3016219

Strand: Direct

Name: 115352788

Synonym: Bamb_2737

Alternate gene names: NA

Gene position: 3015185-3016219 (Clockwise)

Preceding gene: 115352787

Following gene: 115352789

Centisome position: 84.78

GC content: 69.47

Gene sequence:

>1035_bases
ATGGCTGAAGCGATCCTCATCGGCGTAAACCTCGACGGCGTGCTCGAACACGACGGCCTGCCGCTGCCCACGCCGGCCGA
GCGGTTCCGGATGATCGCCGGCGCCGGCGCGTTCGACTATGTCGAAAAGAACCCGGTGCGCGGCGAGGATCTCGCGCCGT
ACTTCGCGCTGGTCGACCGGCATGCGCTGCCGATTCGCGTGATCGGCGGCATCTGGCGCGCCGGCCGCGACGAAGCGCAT
GTCGACGAGATCATCGACGCCGGCGCGCGGTTCGGCAGCACGGTGCTCAACTGCCAGCTGTACGCGCACCACGCGGACGG
TCATCCGTTGTCGGACCGCGAAGTCGCCGCCTTCTACCTGCGCGCGTACGAACGCGGCGAGCCGGTCGGCTGCCTGCCGA
GCCTCGAAGTGCACGTCGACATGTGGAGCGAGGATTTCCGGCGGGTCGCGCGGGTCGCGCAATGCGTCGAGCGGGCCGGC
GCGCCGTTCAGGATCACGCTCGACCATTCGCATCTGCTGTTCAAGATCGGCAATCGCGGCGAACTCGACGCGTCAGGCTT
GCACGAGCCGGCCGGCAGCGCGCGCCACTTGCTCGACCCGGCGTCGCCGTCGGCCGTCTACGCCGACTGGATCGCACGCG
GCTGGGTCCGGCACGCGCATGCGCGCAGCGTGATCCCGAACAATCCGGAGAACCGCTGGATGCGCCGCGCGGACGGCCGG
CCCGGCCGCGGAATCCAGTATCCGTTCGTCGAACCGGCGCCAGGCGTCTATCACGGCGATTGGCATGCGGCGCCGCTCGA
CACATGGAAGACGGCGCTGTGGCAGCTGCTGCAGTGGCAGGTCCATGCGCGGCCGACGTTGCTCGAGCAGATCAGCTGCG
AGTTCATTCCGTTTCCGGACTACGGCGGCGGCGCCCGCTATTCGATCTTCGACAACAACGTCGCGTGCGCGCAGTGGCTG
CGCGACACGTGGCACGCGCTTGCCGCGCAGCCGGCGGATACGCCGGCCGCCGGCTGCGCGCGCAGCTTTACCTGA

Upstream 100 bases:

>100_bases
ACCGCCGCATTGGCGATTTTTCGTCAACGTTTGTCATGCGGCGCGCGCGGCATGTCCGTACATTTGGCAGCCATCCAGGG
ACCAGGACGGACGGGAGACG

Downstream 100 bases:

>100_bases
TTCGCCCGCCCCACCCGAGACCTGAGGACCGAACGATGACGCAACCAGCATTCCATTTTTCGCTGAACCGGATGAGCGCG
CCGCGCCTGCCGCTCGACCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 344; Mature: 343

Protein sequence:

>344_residues
MAEAILIGVNLDGVLEHDGLPLPTPAERFRMIAGAGAFDYVEKNPVRGEDLAPYFALVDRHALPIRVIGGIWRAGRDEAH
VDEIIDAGARFGSTVLNCQLYAHHADGHPLSDREVAAFYLRAYERGEPVGCLPSLEVHVDMWSEDFRRVARVAQCVERAG
APFRITLDHSHLLFKIGNRGELDASGLHEPAGSARHLLDPASPSAVYADWIARGWVRHAHARSVIPNNPENRWMRRADGR
PGRGIQYPFVEPAPGVYHGDWHAAPLDTWKTALWQLLQWQVHARPTLLEQISCEFIPFPDYGGGARYSIFDNNVACAQWL
RDTWHALAAQPADTPAAGCARSFT

Sequences:

>Translated_344_residues
MAEAILIGVNLDGVLEHDGLPLPTPAERFRMIAGAGAFDYVEKNPVRGEDLAPYFALVDRHALPIRVIGGIWRAGRDEAH
VDEIIDAGARFGSTVLNCQLYAHHADGHPLSDREVAAFYLRAYERGEPVGCLPSLEVHVDMWSEDFRRVARVAQCVERAG
APFRITLDHSHLLFKIGNRGELDASGLHEPAGSARHLLDPASPSAVYADWIARGWVRHAHARSVIPNNPENRWMRRADGR
PGRGIQYPFVEPAPGVYHGDWHAAPLDTWKTALWQLLQWQVHARPTLLEQISCEFIPFPDYGGGARYSIFDNNVACAQWL
RDTWHALAAQPADTPAAGCARSFT
>Mature_343_residues
AEAILIGVNLDGVLEHDGLPLPTPAERFRMIAGAGAFDYVEKNPVRGEDLAPYFALVDRHALPIRVIGGIWRAGRDEAHV
DEIIDAGARFGSTVLNCQLYAHHADGHPLSDREVAAFYLRAYERGEPVGCLPSLEVHVDMWSEDFRRVARVAQCVERAGA
PFRITLDHSHLLFKIGNRGELDASGLHEPAGSARHLLDPASPSAVYADWIARGWVRHAHARSVIPNNPENRWMRRADGRP
GRGIQYPFVEPAPGVYHGDWHAAPLDTWKTALWQLLQWQVHARPTLLEQISCEFIPFPDYGGGARYSIFDNNVACAQWLR
DTWHALAAQPADTPAAGCARSFT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38175; Mature: 38044

Theoretical pI: Translated: 6.46; Mature: 6.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEAILIGVNLDGVLEHDGLPLPTPAERFRMIAGAGAFDYVEKNPVRGEDLAPYFALVDR
CCCEEEEEECCCCEECCCCCCCCCHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHHHHHHC
HALPIRVIGGIWRAGRDEAHVDEIIDAGARFGSTVLNCQLYAHHADGHPLSDREVAAFYL
CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCEEEEEEEEEEECCCCCCCCHHHHHHHH
RAYERGEPVGCLPSLEVHVDMWSEDFRRVARVAQCVERAGAPFRITLDHSHLLFKIGNRG
HHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEECCCC
ELDASGLHEPAGSARHLLDPASPSAVYADWIARGWVRHAHARSVIPNNPENRWMRRADGR
CCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCC
PGRGIQYPFVEPAPGVYHGDWHAAPLDTWKTALWQLLQWQVHARPTLLEQISCEFIPFPD
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEECCC
YGGGARYSIFDNNVACAQWLRDTWHALAAQPADTPAAGCARSFT
CCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCC
>Mature Secondary Structure 
AEAILIGVNLDGVLEHDGLPLPTPAERFRMIAGAGAFDYVEKNPVRGEDLAPYFALVDR
CCEEEEEECCCCEECCCCCCCCCHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHHHHHHC
HALPIRVIGGIWRAGRDEAHVDEIIDAGARFGSTVLNCQLYAHHADGHPLSDREVAAFYL
CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCEEEEEEEEEEECCCCCCCCHHHHHHHH
RAYERGEPVGCLPSLEVHVDMWSEDFRRVARVAQCVERAGAPFRITLDHSHLLFKIGNRG
HHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEECCCC
ELDASGLHEPAGSARHLLDPASPSAVYADWIARGWVRHAHARSVIPNNPENRWMRRADGR
CCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCC
PGRGIQYPFVEPAPGVYHGDWHAAPLDTWKTALWQLLQWQVHARPTLLEQISCEFIPFPD
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEECCC
YGGGARYSIFDNNVACAQWLRDTWHALAAQPADTPAAGCARSFT
CCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA