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The map label for this gene is alsB [C]

Identifier: 115352787

GI number: 115352787

Start: 3013951

End: 3015042

Strand: Direct

Name: alsB [C]

Synonym: Bamb_2736

Alternate gene names: 115352787

Gene position: 3013951-3015042 (Clockwise)

Preceding gene: 115352783

Following gene: 115352788

Centisome position: 84.74

GC content: 72.16

Gene sequence:

>1092_bases
ATGGCGACGAACAACATGGAGACGACCATGACCGACCCGTCCGGTCCGCGCTGGCGCAAGCGCACCGCGCGCTTCGACGA
GATCGCGGCACTCGCCGGGGTCAGCACGACCACCGTCGACCGCGTGCTGAACGAGCGCGGCAGCGTGTCCGCGCAGGCGC
GCGAACGCGTGGTGGCGGCCGCGCGCAAGCTCGGCGTGCCGCGCCAGTTGCCGGACACGCGGCATGGGCTGCTCCACGTC
GACGTCCTGCTGCCGGACACCGACGCGCCGTTCTTCCGGCGGCTGCAGCAGGCGCTGCAGCGCTCGCTGCAGATGCTCGA
CCGGCGCGTGGTCGTGCACCGGACCATCCTGCCCGCCGCGGACGACGAACGCGCCGCCGCGCTGATCGAGCGGCCCGCCT
ATCGGCGCGCGGCGCTGATCGTCACCGCACGCGACACGCCGCGCGTGCGCGATGCGCTGGCCGGTGCGATCGCGCGCGGC
GAAACCGTCGTCACGATGGTCACGGACATCGGCGGCGGCGCGCGCGTGCACTACGCGGGCATCGACAACTATCGCGCCGG
GCGCACGGCCGGCTACTACATCGGCCGCCTCGCGGCGCACCCCGGCCGCGTGCTGTTGCTGGGCGGACGCATGGGCTATC
GCGCGCACGCCGACCGGATGGCCGGCTGCGTCGACCAGTTAAAGGAGGCGTTCGCCGCCCTCGCCTGCGACGATGCGCCG
GTCGAAACGCTCGACCAGGACGACCGCTGCTACCGCGCGGTCACGAACGCGCTGCACACGTACGACGATATCGTCGGGAT
CTACAACAGCGGCGCCGGCTCGGCCGGCATCGAGGCCGCGCTGCGCAAGGCCGGCGCGGCCGGACGCGTCGTCTGGGTCG
GGCACGAGATGATCGACCTGCACCGCACCTACATCGAGGCCGGCTCGATGGACATCGCGATCGACCAGGATCCGGACGGC
CAGGCGATCTCCGCGCTGCAGCATGTGCTGCATGCGTGCGGCATCGTCGACCAGCCGCCGCCGGGCGACCCGGTCGAATT
CCGCGTGTTCTGCTCGGCCAACGTGCGCACCAGCGCGTATCTGCAGACCTGA

Upstream 100 bases:

>100_bases
CGTCATGCATTCAAAATTAGGCGACGGCCCTGGCCCGCTCAATCGAAACGTTGACGAAATTTCGCCATCGCTTTAGCGTT
CCGGACAGCGCCACGCACCG

Downstream 100 bases:

>100_bases
CGCCGCGTCGCGCGTCGCGCGGAGGTGCGGCGCGAAAAATCGACCGCCGCATTGGCGATTTTTCGTCAACGTTTGTCATG
CGGCGCGCGCGGCATGTCCG

Product: LacI family transcription regulator

Products: ADP; phosphate; ribose [Cytoplasm]; D-allose [Cytoplasm] [C]

Alternate protein names: LacI Family Transcription Regulator; Regulatory Protein LacI; LacI Family Transcriptional Regulator; Transcriptional Regulator; Transcriptional Regulator Protein; Transcriptional Regulator Protein LacI Family; Regulatory Protein LacI Family; LacI Family Regulatory Protein; Transcriptional Regulator LacI Family Protein; HTH-Type Transcriptional Repressor PurR; LacI Regulatory Protein; ABC-Type Sugar Transport System Periplasmic Component; Regulatory Protein; Laci-Related Transcriptional Regulator Protein; LacI Family Regulatory; Transcription Regulator Protein; HTH-Type Transcriptional Repressor Purr; Laci-Family Transcription Regulator; Transcriptional Regulatory Protein LacI Family; Transcription Regulator

Number of amino acids: Translated: 363; Mature: 362

Protein sequence:

>363_residues
MATNNMETTMTDPSGPRWRKRTARFDEIAALAGVSTTTVDRVLNERGSVSAQARERVVAAARKLGVPRQLPDTRHGLLHV
DVLLPDTDAPFFRRLQQALQRSLQMLDRRVVVHRTILPAADDERAAALIERPAYRRAALIVTARDTPRVRDALAGAIARG
ETVVTMVTDIGGGARVHYAGIDNYRAGRTAGYYIGRLAAHPGRVLLLGGRMGYRAHADRMAGCVDQLKEAFAALACDDAP
VETLDQDDRCYRAVTNALHTYDDIVGIYNSGAGSAGIEAALRKAGAAGRVVWVGHEMIDLHRTYIEAGSMDIAIDQDPDG
QAISALQHVLHACGIVDQPPPGDPVEFRVFCSANVRTSAYLQT

Sequences:

>Translated_363_residues
MATNNMETTMTDPSGPRWRKRTARFDEIAALAGVSTTTVDRVLNERGSVSAQARERVVAAARKLGVPRQLPDTRHGLLHV
DVLLPDTDAPFFRRLQQALQRSLQMLDRRVVVHRTILPAADDERAAALIERPAYRRAALIVTARDTPRVRDALAGAIARG
ETVVTMVTDIGGGARVHYAGIDNYRAGRTAGYYIGRLAAHPGRVLLLGGRMGYRAHADRMAGCVDQLKEAFAALACDDAP
VETLDQDDRCYRAVTNALHTYDDIVGIYNSGAGSAGIEAALRKAGAAGRVVWVGHEMIDLHRTYIEAGSMDIAIDQDPDG
QAISALQHVLHACGIVDQPPPGDPVEFRVFCSANVRTSAYLQT
>Mature_362_residues
ATNNMETTMTDPSGPRWRKRTARFDEIAALAGVSTTTVDRVLNERGSVSAQARERVVAAARKLGVPRQLPDTRHGLLHVD
VLLPDTDAPFFRRLQQALQRSLQMLDRRVVVHRTILPAADDERAAALIERPAYRRAALIVTARDTPRVRDALAGAIARGE
TVVTMVTDIGGGARVHYAGIDNYRAGRTAGYYIGRLAAHPGRVLLLGGRMGYRAHADRMAGCVDQLKEAFAALACDDAPV
ETLDQDDRCYRAVTNALHTYDDIVGIYNSGAGSAGIEAALRKAGAAGRVVWVGHEMIDLHRTYIEAGSMDIAIDQDPDGQ
AISALQHVLHACGIVDQPPPGDPVEFRVFCSANVRTSAYLQT

Specific function: Part Of The Binding-Protein-Dependent Transport System Alsbac For D-Allose. [C]

COG id: COG1879

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39366; Mature: 39235

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: PS50932 HTH_LACI_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATNNMETTMTDPSGPRWRKRTARFDEIAALAGVSTTTVDRVLNERGSVSAQARERVVAA
CCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHH
ARKLGVPRQLPDTRHGLLHVDVLLPDTDAPFFRRLQQALQRSLQMLDRRVVVHRTILPAA
HHHHCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DDERAAALIERPAYRRAALIVTARDTPRVRDALAGAIARGETVVTMVTDIGGGARVHYAG
CCHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCEEEEEEEECCCCCEEEEEC
IDNYRAGRTAGYYIGRLAAHPGRVLLLGGRMGYRAHADRMAGCVDQLKEAFAALACDDAP
CCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
VETLDQDDRCYRAVTNALHTYDDIVGIYNSGAGSAGIEAALRKAGAAGRVVWVGHEMIDL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEECHHHHHH
HRTYIEAGSMDIAIDQDPDGQAISALQHVLHACGIVDQPPPGDPVEFRVFCSANVRTSAY
HHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCEE
LQT
ECC
>Mature Secondary Structure 
ATNNMETTMTDPSGPRWRKRTARFDEIAALAGVSTTTVDRVLNERGSVSAQARERVVAA
CCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHH
ARKLGVPRQLPDTRHGLLHVDVLLPDTDAPFFRRLQQALQRSLQMLDRRVVVHRTILPAA
HHHHCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DDERAAALIERPAYRRAALIVTARDTPRVRDALAGAIARGETVVTMVTDIGGGARVHYAG
CCHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCEEEEEEEECCCCCEEEEEC
IDNYRAGRTAGYYIGRLAAHPGRVLLLGGRMGYRAHADRMAGCVDQLKEAFAALACDDAP
CCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
VETLDQDDRCYRAVTNALHTYDDIVGIYNSGAGSAGIEAALRKAGAAGRVVWVGHEMIDL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEECHHHHHH
HRTYIEAGSMDIAIDQDPDGQAISALQHVLHACGIVDQPPPGDPVEFRVFCSANVRTSAY
HHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCEE
LQT
ECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; ribose [Periplasm]; D-allose [Periplasm]; ATP [C]

Specific reaction: ATP + H2O + ribose [Periplasm] = ADP + phosphate + ribose [Cytoplasm] D-allose [Periplasm] + ATP + H2O = D-allose [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA