| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is 115352730
Identifier: 115352730
GI number: 115352730
Start: 2951123
End: 2951335
Strand: Direct
Name: 115352730
Synonym: Bamb_2679
Alternate gene names: NA
Gene position: 2951123-2951335 (Clockwise)
Preceding gene: 115352729
Following gene: 115352731
Centisome position: 82.98
GC content: 64.32
Gene sequence:
>213_bases GTGATAAGAGAAAGTCTCATGAGTGAAATCAAGGAAATGCCGCTGGTCGAACTGACGGCCAAGGATCTCCCCGCCTACTG CCCGAACCCGGCCATGGCGCGCTGGAGCGCGCACCCGCGCGTGTTCATCGACGTCTCGCACGGCGAGGCGCGCTGCCCGT ACTGCGGCACGCGCTACAAGCTGCGCGACGGCGAGGTGGTCAAGGGCCATTGA
Upstream 100 bases:
>100_bases AGTCGGCGTTTTTCGATATCGTGTCCGGCAAGAACGCGAAGTACGCGCACTGGCTGACGAAGGTCTGAGCGCGCCGCGCG ACCGACCGCCCCACCACAGA
Downstream 100 bases:
>100_bases GCCCGACCGGGCCCGCGGGCCCGCCGCACGCGAGGCGGCGCAGCCGGAACTCCGGCGCGCCGCCCTTTTCCTGTTCTGAC AACCCGAACGCGGTGCATGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 70; Mature: 70
Protein sequence:
>70_residues MIRESLMSEIKEMPLVELTAKDLPAYCPNPAMARWSAHPRVFIDVSHGEARCPYCGTRYKLRDGEVVKGH
Sequences:
>Translated_70_residues MIRESLMSEIKEMPLVELTAKDLPAYCPNPAMARWSAHPRVFIDVSHGEARCPYCGTRYKLRDGEVVKGH >Mature_70_residues MIRESLMSEIKEMPLVELTAKDLPAYCPNPAMARWSAHPRVFIDVSHGEARCPYCGTRYKLRDGEVVKGH
Specific function: Unknown
COG id: COG4391
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7959; Mature: 7959
Theoretical pI: Translated: 8.07; Mature: 8.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 10.0 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 10.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRESLMSEIKEMPLVELTAKDLPAYCPNPAMARWSAHPRVFIDVSHGEARCPYCGTRYK CCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCEECCCCCEEEEEECCCCCCCCCCCCEEE LRDGEVVKGH ECCCCEEECC >Mature Secondary Structure MIRESLMSEIKEMPLVELTAKDLPAYCPNPAMARWSAHPRVFIDVSHGEARCPYCGTRYK CCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCEECCCCCEEEEEECCCCCCCCCCCCEEE LRDGEVVKGH ECCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA