| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is ilvE [H]
Identifier: 115352729
GI number: 115352729
Start: 2950167
End: 2951090
Strand: Direct
Name: ilvE [H]
Synonym: Bamb_2678
Alternate gene names: 115352729
Gene position: 2950167-2951090 (Clockwise)
Preceding gene: 115352719
Following gene: 115352730
Centisome position: 82.95
GC content: 64.72
Gene sequence:
>924_bases ATGTCAATGGCCGACCGCGACGGCAAGATCTGGATGGACGGCAAGCTGATCGACTGGCGCGATGCCACGATTCACGTCCT GACCCATACGCTGCACTACGGCATGGGCGTCTTCGAAGGCGTGCGCGCGTACCGGACGGCCGACGGCAGCACCGCGATCT TCCGCCTGCACGAGCACACCAAACGTCTGCTGAATTCGGCGAAGATCTTCCAGATGGACGTGCCGTTCGACCGGGAAACC CTCGAAGCCGCGCAGCTCGACGTCGTGCGCGAGAACAAGCTCGAGTCGGGCTACCTGCGCCCGATCATCTGGGTCGGCTC GGAAAAGCTCGGCGTGTCCGCGAAGGGCAACACGATCCACGTCGCGATCGCCGCGTGGCCGTGGGGCGCGTACCTCGGCG AGGAAGGCCTCGCGAAGGGCATCCGCGTGAAGACGTCATCATTCACGCGCCACCACGTGAACGTGTCGATGGTGCGCGCG AAGGCGTCGGGCTGGTACGTGAACTCGATCCTCGCGAACCAGGAAGCGACCGCCGACGGCTACGACGAAGCGCTGCTGCT CGACGTCGACGGCTACGTGTCGGAAGGCTCCGGCGAGAACTTCTTCCTGGTGAACAACGGCAAGCTGTATACGCCCGACC TGTCGTCGTGCCTCGACGGCATCACGCGCGACACGATCATCACGCTCGCGCGGGACGCAGGCATCCAGGTGATCGAGAAG CGCATCACGCGCGACGAGGTCTACACGGCCGACGAAGCGTTCTTCACGGGCACGGCCGCCGAAGTCACGCCGATCCGCGA ACTCGACAACCGCACGATCGGCAGCGGCGCGCGCGGCCCCGTGACGGAAAAGCTCCAGTCGGCGTTTTTCGATATCGTGT CCGGCAAGAACGCGAAGTACGCGCACTGGCTGACGAAGGTCTGA
Upstream 100 bases:
>100_bases GCGACCGACCGGCTCGACACCAAATGACGCTAAAATAAGCGTCTTTCCGGCTCAATGCTGCACACAAGCCGCTGTACCAA TTGCTTCACAGGAGAACCCC
Downstream 100 bases:
>100_bases GCGCGCCGCGCGACCGACCGCCCCACCACAGAGTGATAAGAGAAAGTCTCATGAGTGAAATCAAGGAAATGCCGCTGGTC GAACTGACGGCCAAGGATCT
Product: branched-chain amino acid aminotransferase
Products: NA
Alternate protein names: BCAT [H]
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MSMADRDGKIWMDGKLIDWRDATIHVLTHTLHYGMGVFEGVRAYRTADGSTAIFRLHEHTKRLLNSAKIFQMDVPFDRET LEAAQLDVVRENKLESGYLRPIIWVGSEKLGVSAKGNTIHVAIAAWPWGAYLGEEGLAKGIRVKTSSFTRHHVNVSMVRA KASGWYVNSILANQEATADGYDEALLLDVDGYVSEGSGENFFLVNNGKLYTPDLSSCLDGITRDTIITLARDAGIQVIEK RITRDEVYTADEAFFTGTAAEVTPIRELDNRTIGSGARGPVTEKLQSAFFDIVSGKNAKYAHWLTKV
Sequences:
>Translated_307_residues MSMADRDGKIWMDGKLIDWRDATIHVLTHTLHYGMGVFEGVRAYRTADGSTAIFRLHEHTKRLLNSAKIFQMDVPFDRET LEAAQLDVVRENKLESGYLRPIIWVGSEKLGVSAKGNTIHVAIAAWPWGAYLGEEGLAKGIRVKTSSFTRHHVNVSMVRA KASGWYVNSILANQEATADGYDEALLLDVDGYVSEGSGENFFLVNNGKLYTPDLSSCLDGITRDTIITLARDAGIQVIEK RITRDEVYTADEAFFTGTAAEVTPIRELDNRTIGSGARGPVTEKLQSAFFDIVSGKNAKYAHWLTKV >Mature_306_residues SMADRDGKIWMDGKLIDWRDATIHVLTHTLHYGMGVFEGVRAYRTADGSTAIFRLHEHTKRLLNSAKIFQMDVPFDRETL EAAQLDVVRENKLESGYLRPIIWVGSEKLGVSAKGNTIHVAIAAWPWGAYLGEEGLAKGIRVKTSSFTRHHVNVSMVRAK ASGWYVNSILANQEATADGYDEALLLDVDGYVSEGSGENFFLVNNGKLYTPDLSSCLDGITRDTIITLARDAGIQVIEKR ITRDEVYTADEAFFTGTAAEVTPIRELDNRTIGSGARGPVTEKLQSAFFDIVSGKNAKYAHWLTKV
Specific function: Acts on leucine, isoleucine and valine [H]
COG id: COG0115
COG function: function code EH; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI50658084, Length=334, Percent_Identity=26.9461077844311, Blast_Score=89, Evalue=6e-18, Organism=Escherichia coli, GI48994963, Length=300, Percent_Identity=47, Blast_Score=280, Evalue=8e-77, Organism=Caenorhabditis elegans, GI17565728, Length=282, Percent_Identity=27.3049645390071, Blast_Score=84, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6322608, Length=285, Percent_Identity=27.719298245614, Blast_Score=84, Evalue=3e-17, Organism=Saccharomyces cerevisiae, GI6322002, Length=263, Percent_Identity=28.5171102661597, Blast_Score=78, Evalue=2e-15, Organism=Drosophila melanogaster, GI24641779, Length=319, Percent_Identity=26.6457680250784, Blast_Score=70, Evalue=2e-12,
Paralogues:
None
Copy number: 2342 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 11,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001544 - InterPro: IPR018300 - InterPro: IPR005785 [H]
Pfam domain/function: PF01063 Aminotran_4 [H]
EC number: =2.6.1.42 [H]
Molecular weight: Translated: 34002; Mature: 33871
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: PS00770 AA_TRANSFER_CLASS_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMADRDGKIWMDGKLIDWRDATIHVLTHTLHYGMGVFEGVRAYRTADGSTAIFRLHEHT CCCCCCCCEEEECCEEEECCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHH KRLLNSAKIFQMDVPFDRETLEAAQLDVVRENKLESGYLRPIIWVGSEKLGVSAKGNTIH HHHHCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCEEECCCEEE VAIAAWPWGAYLGEEGLAKGIRVKTSSFTRHHVNVSMVRAKASGWYVNSILANQEATADG EEEEECCCHHHHCCHHHHCCEEEEECCCEEEEEEEEEEEEECCCEEEEHHHCCCCCCCCC YDEALLLDVDGYVSEGSGENFFLVNNGKLYTPDLSSCLDGITRDTIITLARDAGIQVIEK CCCEEEEEECCCEECCCCCEEEEEECCEEECCCHHHHHCCCCHHHEEEEECCCCHHHHHH RITRDEVYTADEAFFTGTAAEVTPIRELDNRTIGSGARGPVTEKLQSAFFDIVSGKNAKY HHHHHHHEECCCCEEECCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC AHWLTKV HHHEECC >Mature Secondary Structure SMADRDGKIWMDGKLIDWRDATIHVLTHTLHYGMGVFEGVRAYRTADGSTAIFRLHEHT CCCCCCCEEEECCEEEECCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHH KRLLNSAKIFQMDVPFDRETLEAAQLDVVRENKLESGYLRPIIWVGSEKLGVSAKGNTIH HHHHCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCEEECCCEEE VAIAAWPWGAYLGEEGLAKGIRVKTSSFTRHHVNVSMVRAKASGWYVNSILANQEATADG EEEEECCCHHHHCCHHHHCCEEEEECCCEEEEEEEEEEEEECCCEEEEHHHCCCCCCCCC YDEALLLDVDGYVSEGSGENFFLVNNGKLYTPDLSSCLDGITRDTIITLARDAGIQVIEK CCCEEEEEECCCEECCCCCEEEEEECCEEECCCHHHHHCCCCHHHEEEEECCCCHHHHHH RITRDEVYTADEAFFTGTAAEVTPIRELDNRTIGSGARGPVTEKLQSAFFDIVSGKNAKY HHHHHHHEECCCCEEECCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC AHWLTKV HHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]