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The map label for this gene is glxA [H]

Identifier: 115352710

GI number: 115352710

Start: 2929659

End: 2930660

Strand: Direct

Name: glxA [H]

Synonym: Bamb_2659

Alternate gene names: 115352710

Gene position: 2929659-2930660 (Clockwise)

Preceding gene: 115352708

Following gene: 115352717

Centisome position: 82.37

GC content: 73.85

Gene sequence:

>1002_bases
ATGCGCGCCGCTGCGTCGTCCGTTACCCCCGCCCCGACCGTCGTCGCCGTGATCGCGTACGACGGCATCAGCCCGTTCCA
CCTGTCGGTGCCGTCCGTCGTGTTCGGCAAGGAGCGCGATGCGGCCGCGGCGCCCGCGTTCGAGTTCCGCGTGTGCTCGG
CCGAGCGCGGCCCGCTGTCGACGACGGGCGGCTTCACGATCACCGCGCCGCACGGGCTCGACGCACTCGACGACGCGGAC
ATCGTCATCGTGCCCGCATGGCGCGACCCGGCCGAAGCGCCGCCGGACGTGCTGGTCGACGCGGTACGCACGGCGGCCGC
GCGCGGCGCGCAGGTCGTCGGCCTGTGCCTCGGCGCGTACGTGCTCGCCGCGGCCGGACTGCTCGACGGGCGCCCGGCCA
CCACGCACTGGGCGTGGGCCGACGACTTCGCGCAGCGCTTTCCGCGCGTGAAGCTCGACCCCGACGTGCTGTACGTCGAC
GACGGCAACCTGATGACGTCGGCCGGCACGGCCGCAGGGCTCGACTGCTGCCTGCACGTGGTGCGGCGGCGCTTCGGCTC
GGACGCCGCGAACCAGATCGCGCGCCGTCTCGTGATCCCGCCGCACCGGCAGGGCGGACAGGCGCAGTACGTGCCGCAGC
CGGTCGCCGCGCATCCGCGCGACGCGCGGCTCGCCGGCCTGCTCGACTGGGTGCGCGCGCATCTAGACGTCGCGCACAGT
GTGGATTCGCTCGCCGAACGCGTGCTGATGAGCCGGCGCACGTTCACGCGCCACTTCCGCCAGGCGACGGGCATGACCGT
CACCGCATGGCTGCAGGCCGAGCGGCTCACGCGTGCGCAGCATCTGCTGGAAACCACCGGACAATCGATCGACGCGATCG
CGCAGGCGGCCGGCTACGGGTCGAGCGTGTCGCTGCGCCAGCATTTCGCGGGCGCGCTCGGCACGTCGCCGTCGGCCTAT
CGGAGGGAATTTCGCGGCGCCGGGCCCGACGCGCGGCGCTAG

Upstream 100 bases:

>100_bases
AGCGCGATGCGATGCATTGTCGGATCGCATCGCGCTTGCCGACAGTGGCCCGATAGCCATTCTTCGATAGAATCGGGCCA
TCGCCATTCCGGAGCCCGTC

Downstream 100 bases:

>100_bases
CGTGGGCGCCGCGCCGCCGGCGCTCGGCCGGGTAACTCGCTAGCGGGCGCGAACGCTCACGCGCCGTTGATCCAGCGCGC
CGCATACAGCAGCAACGCGA

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MRAAASSVTPAPTVVAVIAYDGISPFHLSVPSVVFGKERDAAAAPAFEFRVCSAERGPLSTTGGFTITAPHGLDALDDAD
IVIVPAWRDPAEAPPDVLVDAVRTAAARGAQVVGLCLGAYVLAAAGLLDGRPATTHWAWADDFAQRFPRVKLDPDVLYVD
DGNLMTSAGTAAGLDCCLHVVRRRFGSDAANQIARRLVIPPHRQGGQAQYVPQPVAAHPRDARLAGLLDWVRAHLDVAHS
VDSLAERVLMSRRTFTRHFRQATGMTVTAWLQAERLTRAQHLLETTGQSIDAIAQAAGYGSSVSLRQHFAGALGTSPSAY
RREFRGAGPDARR

Sequences:

>Translated_333_residues
MRAAASSVTPAPTVVAVIAYDGISPFHLSVPSVVFGKERDAAAAPAFEFRVCSAERGPLSTTGGFTITAPHGLDALDDAD
IVIVPAWRDPAEAPPDVLVDAVRTAAARGAQVVGLCLGAYVLAAAGLLDGRPATTHWAWADDFAQRFPRVKLDPDVLYVD
DGNLMTSAGTAAGLDCCLHVVRRRFGSDAANQIARRLVIPPHRQGGQAQYVPQPVAAHPRDARLAGLLDWVRAHLDVAHS
VDSLAERVLMSRRTFTRHFRQATGMTVTAWLQAERLTRAQHLLETTGQSIDAIAQAAGYGSSVSLRQHFAGALGTSPSAY
RREFRGAGPDARR
>Mature_333_residues
MRAAASSVTPAPTVVAVIAYDGISPFHLSVPSVVFGKERDAAAAPAFEFRVCSAERGPLSTTGGFTITAPHGLDALDDAD
IVIVPAWRDPAEAPPDVLVDAVRTAAARGAQVVGLCLGAYVLAAAGLLDGRPATTHWAWADDFAQRFPRVKLDPDVLYVD
DGNLMTSAGTAAGLDCCLHVVRRRFGSDAANQIARRLVIPPHRQGGQAQYVPQPVAAHPRDARLAGLLDWVRAHLDVAHS
VDSLAERVLMSRRTFTRHFRQATGMTVTAWLQAERLTRAQHLLETTGQSIDAIAQAAGYGSSVSLRQHFAGALGTSPSAY
RREFRGAGPDARR

Specific function: Regulatory Protein For The Xylbafghr Operon. [C]

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 35479; Mature: 35479

Theoretical pI: Translated: 8.36; Mature: 8.36

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAAASSVTPAPTVVAVIAYDGISPFHLSVPSVVFGKERDAAAAPAFEFRVCSAERGPLS
CCCCCCCCCCCCCEEEEEEECCCCCCEECCCHHEECCCCCCCCCCCCEEEEECCCCCCCC
TTGGFTITAPHGLDALDDADIVIVPAWRDPAEAPPDVLVDAVRTAAARGAQVVGLCLGAY
CCCCEEEECCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHH
VLAAAGLLDGRPATTHWAWADDFAQRFPRVKLDPDVLYVDDGNLMTSAGTAAGLDCCLHV
HHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEECCCEEECCCCHHHHHHHHHH
VRRRFGSDAANQIARRLVIPPHRQGGQAQYVPQPVAAHPRDARLAGLLDWVRAHLDVAHS
HHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
VDSLAERVLMSRRTFTRHFRQATGMTVTAWLQAERLTRAQHLLETTGQSIDAIAQAAGYG
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC
SSVSLRQHFAGALGTSPSAYRREFRGAGPDARR
CCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MRAAASSVTPAPTVVAVIAYDGISPFHLSVPSVVFGKERDAAAAPAFEFRVCSAERGPLS
CCCCCCCCCCCCCEEEEEEECCCCCCEECCCHHEECCCCCCCCCCCCEEEEECCCCCCCC
TTGGFTITAPHGLDALDDADIVIVPAWRDPAEAPPDVLVDAVRTAAARGAQVVGLCLGAY
CCCCEEEECCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHH
VLAAAGLLDGRPATTHWAWADDFAQRFPRVKLDPDVLYVDDGNLMTSAGTAAGLDCCLHV
HHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEECCCEEECCCCHHHHHHHHHH
VRRRFGSDAANQIARRLVIPPHRQGGQAQYVPQPVAAHPRDARLAGLLDWVRAHLDVAHS
HHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
VDSLAERVLMSRRTFTRHFRQATGMTVTAWLQAERLTRAQHLLETTGQSIDAIAQAAGYG
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC
SSVSLRQHFAGALGTSPSAYRREFRGAGPDARR
CCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]