| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is kynU [H]
Identifier: 115352677
GI number: 115352677
Start: 2888417
End: 2889670
Strand: Direct
Name: kynU [H]
Synonym: Bamb_2626
Alternate gene names: 115352677
Gene position: 2888417-2889670 (Clockwise)
Preceding gene: 115352676
Following gene: 115352678
Centisome position: 81.21
GC content: 70.1
Gene sequence:
>1254_bases ATGATCAAGACCCGTGAAGACGCGCTCGCCCTCGACCGCGACGACCCGCTCGCCGCGCTGCGCGACCAGTTCGCGCTGCC CGACGGCGTGATCTATCTCGACGGCAACTCGCTCGGCGCCCAGCCGCGCGCGTCGGCCGCCCGCGCGCAACAGGTGATCG GCGCCGAATGGGGCGAAGGCCTGATCCGCAGCTGGAACACCGCCGGCTGGTTCGCGCTGCCGCGCCGCCTCGGCGACAAG CTCGCGACGCTGATAGGCGGCGCACCGGGGGAGACCGTCGTGACCGACACCATCTCGATCAACCTGTTCAAGCTGCTGTC GGCGATGCTGCGTCACCAGGCCGCGCGCGCGCCGGAGCGCCGCGTGATCGTGTCGGAGCGCTCGAACTTCCCGACCGACC TGTACATCGCGCAAGGGCTGATCGAGCAGCTCGGCGGCGGCTACGAGCTGCGCCTGATCGACGATCCGGCCGACCTGCCC GACGCGCTCGGCGCGGACACGGCCGTCGCGATGATCACGCACGTGAACTACCGCACCGGCTACATGCACGACATGCCGGC CGTCACGCAACTCGTGCACGACGCGGGCGCGCTGATGCTGTGGGATCTCGCGCACTCGGCCGGCGCGGTGCCGGTCGACC TGAACGGCGCGCATGCGGACGGCGCGGTCGGTTGCACGTACAAGTATCTGAACGGCGGCCCCGGTTCGCCGGCGTTCGTG TGGGTGCCGCAGCGCCATCACGCGCATTTCTCGCAGCCGCTGTCGGGCTGGTGGGGCCACCGCGCACCGTTCGCGATGCA GCCGGGCTTCGCGCCCGATCCGGGCATCGCGCGCTTCCTGTGCGGCACGCAGCCGATCGTGTCGATGTCGATGGTCGAAT GCGGGCTCGACGTGTTCCTGCAGACCGACATGCACGCGATCCGCCGCAAGTCGCTCGCGCTCACCGATGCGTTCATCGCA CTCGTCGAAGCGCGCTGCGCGGGCCTGTCGCTGAAGCTCGTCACGCCGCGCGCGCATCACCAGCGCGGCTCGCAGGCGAG CTTCGAGCATCCGCACGGCTACGAGGTGATGCAGGCGCTGATCGCGCGTGGCGTGATCGGCGACTACCGCGAGCCGTACG TGCTGCGCTTCGGCTTCACGCCGCTCTATACGCGCTTCGTCGACGTGTGGGATGCCGTCGAGACGCTGCGCGACATCCTG GCCACCGATGCGTGGAAGGCACCCGAATTCGCCGAGCGCGGCGCGGTGACCTGA
Upstream 100 bases:
>100_bases CCGCTGAAGTTCGCGACGCTCGACGCAAGCCCCGTGCGTGCGGTGCTGCGCGCGCTGCCCGGCCACTCCTCCTGATTACC CGACCCACTGACCCGACATC
Downstream 100 bases:
>100_bases TCGGCGTCGACCGGCGCGCGCAGGCCGCGCGCCGCGCCCCCCGTCATTCAAATCTGGAGAGAGTCGTGAATTCTGGTCAT ATGCAGCCACCCGGCGACAA
Product: kynureninase
Products: NA
Alternate protein names: L-kynurenine hydrolase [H]
Number of amino acids: Translated: 417; Mature: 417
Protein sequence:
>417_residues MIKTREDALALDRDDPLAALRDQFALPDGVIYLDGNSLGAQPRASAARAQQVIGAEWGEGLIRSWNTAGWFALPRRLGDK LATLIGGAPGETVVTDTISINLFKLLSAMLRHQAARAPERRVIVSERSNFPTDLYIAQGLIEQLGGGYELRLIDDPADLP DALGADTAVAMITHVNYRTGYMHDMPAVTQLVHDAGALMLWDLAHSAGAVPVDLNGAHADGAVGCTYKYLNGGPGSPAFV WVPQRHHAHFSQPLSGWWGHRAPFAMQPGFAPDPGIARFLCGTQPIVSMSMVECGLDVFLQTDMHAIRRKSLALTDAFIA LVEARCAGLSLKLVTPRAHHQRGSQASFEHPHGYEVMQALIARGVIGDYREPYVLRFGFTPLYTRFVDVWDAVETLRDIL ATDAWKAPEFAERGAVT
Sequences:
>Translated_417_residues MIKTREDALALDRDDPLAALRDQFALPDGVIYLDGNSLGAQPRASAARAQQVIGAEWGEGLIRSWNTAGWFALPRRLGDK LATLIGGAPGETVVTDTISINLFKLLSAMLRHQAARAPERRVIVSERSNFPTDLYIAQGLIEQLGGGYELRLIDDPADLP DALGADTAVAMITHVNYRTGYMHDMPAVTQLVHDAGALMLWDLAHSAGAVPVDLNGAHADGAVGCTYKYLNGGPGSPAFV WVPQRHHAHFSQPLSGWWGHRAPFAMQPGFAPDPGIARFLCGTQPIVSMSMVECGLDVFLQTDMHAIRRKSLALTDAFIA LVEARCAGLSLKLVTPRAHHQRGSQASFEHPHGYEVMQALIARGVIGDYREPYVLRFGFTPLYTRFVDVWDAVETLRDIL ATDAWKAPEFAERGAVT >Mature_417_residues MIKTREDALALDRDDPLAALRDQFALPDGVIYLDGNSLGAQPRASAARAQQVIGAEWGEGLIRSWNTAGWFALPRRLGDK LATLIGGAPGETVVTDTISINLFKLLSAMLRHQAARAPERRVIVSERSNFPTDLYIAQGLIEQLGGGYELRLIDDPADLP DALGADTAVAMITHVNYRTGYMHDMPAVTQLVHDAGALMLWDLAHSAGAVPVDLNGAHADGAVGCTYKYLNGGPGSPAFV WVPQRHHAHFSQPLSGWWGHRAPFAMQPGFAPDPGIARFLCGTQPIVSMSMVECGLDVFLQTDMHAIRRKSLALTDAFIA LVEARCAGLSLKLVTPRAHHQRGSQASFEHPHGYEVMQALIARGVIGDYREPYVLRFGFTPLYTRFVDVWDAVETLRDIL ATDAWKAPEFAERGAVT
Specific function: Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively [H]
COG id: COG3844
COG function: function code E; Kynureninase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the kynureninase family [H]
Homologues:
Organism=Homo sapiens, GI4504937, Length=444, Percent_Identity=28.3783783783784, Blast_Score=149, Evalue=3e-36, Organism=Homo sapiens, GI74101437, Length=285, Percent_Identity=26.6666666666667, Blast_Score=86, Evalue=9e-17, Organism=Caenorhabditis elegans, GI17550466, Length=430, Percent_Identity=26.9767441860465, Blast_Score=147, Evalue=7e-36, Organism=Saccharomyces cerevisiae, GI6323261, Length=456, Percent_Identity=29.1666666666667, Blast_Score=145, Evalue=1e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000192 - InterPro: IPR010111 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00266 Aminotran_5 [H]
EC number: =3.7.1.3 [H]
Molecular weight: Translated: 45421; Mature: 45421
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKTREDALALDRDDPLAALRDQFALPDGVIYLDGNSLGAQPRASAARAQQVIGAEWGEG CCCCCCCHHCCCCCCCHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCH LIRSWNTAGWFALPRRLGDKLATLIGGAPGETVVTDTISINLFKLLSAMLRHQAARAPER HHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCC RVIVSERSNFPTDLYIAQGLIEQLGGGYELRLIDDPADLPDALGADTAVAMITHVNYRTG EEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHCCCCHHHHHHEECCCCCC YMHDMPAVTQLVHDAGALMLWDLAHSAGAVPVDLNGAHADGAVGCTYKYLNGGPGSPAFV CCCCHHHHHHHHHHCCHHEEEHHHHCCCCCEEECCCCCCCCCCEEEEEECCCCCCCCEEE WVPQRHHAHFSQPLSGWWGHRAPFAMQPGFAPDPGIARFLCGTQPIVSMSMVECGLDVFL ECCCHHCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHCHHHHH QTDMHAIRRKSLALTDAFIALVEARCAGLSLKLVTPRAHHQRGSQASFEHPHGYEVMQAL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHCCCCCCCCCCCCCHHHHHHH IARGVIGDYREPYVLRFGFTPLYTRFVDVWDAVETLRDILATDAWKAPEFAERGAVT HHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCC >Mature Secondary Structure MIKTREDALALDRDDPLAALRDQFALPDGVIYLDGNSLGAQPRASAARAQQVIGAEWGEG CCCCCCCHHCCCCCCCHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCH LIRSWNTAGWFALPRRLGDKLATLIGGAPGETVVTDTISINLFKLLSAMLRHQAARAPER HHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCC RVIVSERSNFPTDLYIAQGLIEQLGGGYELRLIDDPADLPDALGADTAVAMITHVNYRTG EEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHCCCCHHHHHHEECCCCCC YMHDMPAVTQLVHDAGALMLWDLAHSAGAVPVDLNGAHADGAVGCTYKYLNGGPGSPAFV CCCCHHHHHHHHHHCCHHEEEHHHHCCCCCEEECCCCCCCCCCEEEEEECCCCCCCCEEE WVPQRHHAHFSQPLSGWWGHRAPFAMQPGFAPDPGIARFLCGTQPIVSMSMVECGLDVFL ECCCHHCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHCHHHHH QTDMHAIRRKSLALTDAFIALVEARCAGLSLKLVTPRAHHQRGSQASFEHPHGYEVMQAL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHCCCCCCCCCCCCCHHHHHHH IARGVIGDYREPYVLRFGFTPLYTRFVDVWDAVETLRDILATDAWKAPEFAERGAVT HHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA