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The map label for this gene is yjcC [C]

Identifier: 115352636

GI number: 115352636

Start: 2848574

End: 2849848

Strand: Direct

Name: yjcC [C]

Synonym: Bamb_2585

Alternate gene names: 115352636

Gene position: 2848574-2849848 (Clockwise)

Preceding gene: 115352635

Following gene: 115352640

Centisome position: 80.09

GC content: 70.43

Gene sequence:

>1275_bases
ATGAGCATGATCGACATCGATCCCCCCGGCTTCCAGCCGCCCCGCCCCGTCGCCGGTGACGACGGAAAGCGGCGCACCGT
GCTGTACGGCGCGTACACCGTGTTCAGCGTGTTCCAGCCGGTTTTCTCGGTGTCGCACCGCCGCGCGATCGGCTATCACG
CGTCGCTGCGCGCGCACGACGAGGAAAGCCGCCAGGTCGCGTCGCACGAGGTATTCACGCAGGCGGCGCGGCGCGGCGAC
CTGCTCGAACTCGGCCGGCTCGCCGAATCGCTGCATCTCGGCAACTTCCACGCGTTCGACAGTCACGACGAATGGCTCTT
CCTGAGCCTGCATCCGGCCGCGCTGATGGACACCGTCTACGGCGACGCGCTGCTCGCGAACCTGAAGGCGCTCGGGCTGC
CGCCGCATCGCGTGGTGCTCGAGGTGCCCGAACAGGCGGGCGGCGAGACGCCGCGCTACGCGGCGATCGTCGACGGGTTG
CGCAAGGCCGGCTTCCTGATCGCGCTCGGCGGCTTCGGCGCGAAGCATTCGAACATCGACCGCGTGTGGCACCTGCACCC
CGACATCGTCACGCTCGATCGCGGCATCCTCGCGCAGGCGAGCGAGCATTCGCATCTCGAACGCGTGCTGCCGGGGCTCG
TGTCGCTGCTGCACGAATCCGGCCAGCTCGTGCTGATGGGCGGGCTCGCGACCGAGCGCGACGCGCTGATCGCGCTCGAA
TGCGACGTCGATTTCGTGCAAGGGCAGTACTTCGCGGGGCCGAGCGTCGACCCCGTCCAGCCGCAGGCCGCCGCCGGCTG
CATGGACACGCTGTCGGCCGCGTTGCGGCTGCGCGTCGCGCAACGCGAGCGCACGCAGGCCGAACGCCTCGCGCCGTATG
TCGCCGCGCTGGAGGAAGCGAGCAAGAAGCTCGCCGCCGGCGAGCCGCTGATCGACGCCGCCGGCGCCGTGCTCGGCTTG
CCGGAAACCGCGCGCTGCTTCCTGCTCGATGCATCGGGCCGCCAGATCGGCGACAACGTGCTCGCGCGCGGCAGCGTCTC
GCAGCGGGCGAAACGCTTCCGGCCGCTGCTGCATTCGGAAGGCGCGAGCTGGGAGCGCCGCCCGTACTTCAGCCACGCGA
TGCGCGCGCCGGGCCGCGTGCATCTGACGCCGCCGTACCTGTCGATCAACGAGGCGCACCTGTGCGTGACCGCATCGATC
GCCGCGCCGGTCGCGACCGGCATGCAGGTGCTGTGCGTGGACATCAACTGGGAAGCGGCGCTCAACCGCGAATGA

Upstream 100 bases:

>100_bases
CCGGCGCCCGCGGCGGCCCGCCGCACGGGGCACGATGCCGTGCATGCTTCTTGCTCGCCTATTCTGTAGGTAAACTGGCA
GTCTCCCTTCGGCCGACATC

Downstream 100 bases:

>100_bases
AGATGCGCGCCGCGCTCATGCGGCGCCGTTGACATCGCCAGCCCGGCGCGCGATCAGCCGGTGCACGCGCTTGCCGGACG
ACGCGCTGACGACTTCATGC

Product: diguanylate phosphodiesterase

Products: NA

Alternate protein names: EAL Domain-Containing Protein; Diguanylate Cyclase/Phosphodiesterase; EAL Domain Protein; Sensor Protein; Cyclic Diguanylate Phosphodiesterase Domain Protein; Cyclic Diguanylate Phosphodiesterase; Signaling Protein

Number of amino acids: Translated: 424; Mature: 423

Protein sequence:

>424_residues
MSMIDIDPPGFQPPRPVAGDDGKRRTVLYGAYTVFSVFQPVFSVSHRRAIGYHASLRAHDEESRQVASHEVFTQAARRGD
LLELGRLAESLHLGNFHAFDSHDEWLFLSLHPAALMDTVYGDALLANLKALGLPPHRVVLEVPEQAGGETPRYAAIVDGL
RKAGFLIALGGFGAKHSNIDRVWHLHPDIVTLDRGILAQASEHSHLERVLPGLVSLLHESGQLVLMGGLATERDALIALE
CDVDFVQGQYFAGPSVDPVQPQAAAGCMDTLSAALRLRVAQRERTQAERLAPYVAALEEASKKLAAGEPLIDAAGAVLGL
PETARCFLLDASGRQIGDNVLARGSVSQRAKRFRPLLHSEGASWERRPYFSHAMRAPGRVHLTPPYLSINEAHLCVTASI
AAPVATGMQVLCVDINWEAALNRE

Sequences:

>Translated_424_residues
MSMIDIDPPGFQPPRPVAGDDGKRRTVLYGAYTVFSVFQPVFSVSHRRAIGYHASLRAHDEESRQVASHEVFTQAARRGD
LLELGRLAESLHLGNFHAFDSHDEWLFLSLHPAALMDTVYGDALLANLKALGLPPHRVVLEVPEQAGGETPRYAAIVDGL
RKAGFLIALGGFGAKHSNIDRVWHLHPDIVTLDRGILAQASEHSHLERVLPGLVSLLHESGQLVLMGGLATERDALIALE
CDVDFVQGQYFAGPSVDPVQPQAAAGCMDTLSAALRLRVAQRERTQAERLAPYVAALEEASKKLAAGEPLIDAAGAVLGL
PETARCFLLDASGRQIGDNVLARGSVSQRAKRFRPLLHSEGASWERRPYFSHAMRAPGRVHLTPPYLSINEAHLCVTASI
AAPVATGMQVLCVDINWEAALNRE
>Mature_423_residues
SMIDIDPPGFQPPRPVAGDDGKRRTVLYGAYTVFSVFQPVFSVSHRRAIGYHASLRAHDEESRQVASHEVFTQAARRGDL
LELGRLAESLHLGNFHAFDSHDEWLFLSLHPAALMDTVYGDALLANLKALGLPPHRVVLEVPEQAGGETPRYAAIVDGLR
KAGFLIALGGFGAKHSNIDRVWHLHPDIVTLDRGILAQASEHSHLERVLPGLVSLLHESGQLVLMGGLATERDALIALEC
DVDFVQGQYFAGPSVDPVQPQAAAGCMDTLSAALRLRVAQRERTQAERLAPYVAALEEASKKLAAGEPLIDAAGAVLGLP
ETARCFLLDASGRQIGDNVLARGSVSQRAKRFRPLLHSEGASWERRPYFSHAMRAPGRVHLTPPYLSINEAHLCVTASIA
APVATGMQVLCVDINWEAALNRE

Specific function: Unknown

COG id: COG2200

COG function: function code T; FOG: EAL domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790496, Length=239, Percent_Identity=21.3389121338912, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46006; Mature: 45875

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMIDIDPPGFQPPRPVAGDDGKRRTVLYGAYTVFSVFQPVFSVSHRRAIGYHASLRAHD
CCEECCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCEECEECCCC
EESRQVASHEVFTQAARRGDLLELGRLAESLHLGNFHAFDSHDEWLFLSLHPAALMDTVY
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEECCCCCCCEEEEEECHHHHHHHHH
GDALLANLKALGLPPHRVVLEVPEQAGGETPRYAAIVDGLRKAGFLIALGGFGAKHSNID
HHHHHHHHHHCCCCCCCEEEECCHHCCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCC
RVWHLHPDIVTLDRGILAQASEHSHLERVLPGLVSLLHESGQLVLMGGLATERDALIALE
EEEEECCCEEEECCCHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEE
CDVDFVQGQYFAGPSVDPVQPQAAAGCMDTLSAALRLRVAQRERTQAERLAPYVAALEEA
ECCEEECCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SKKLAAGEPLIDAAGAVLGLPETARCFLLDASGRQIGDNVLARGSVSQRAKRFRPLLHSE
HHHHHCCCCHHHHCCHHCCCCCCCEEEEEECCCCCCCCHHHHCCCHHHHHHHHHHHHHCC
GASWERRPYFSHAMRAPGRVHLTPPYLSINEAHLCVTASIAAPVATGMQVLCVDINWEAA
CCCCCCCCCHHHHHCCCCEEEECCCCCCCCCCEEEEEEHHHHHHHCCCEEEEEEECCCCC
LNRE
CCCC
>Mature Secondary Structure 
SMIDIDPPGFQPPRPVAGDDGKRRTVLYGAYTVFSVFQPVFSVSHRRAIGYHASLRAHD
CEECCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCEECEECCCC
EESRQVASHEVFTQAARRGDLLELGRLAESLHLGNFHAFDSHDEWLFLSLHPAALMDTVY
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEECCCCCCCEEEEEECHHHHHHHHH
GDALLANLKALGLPPHRVVLEVPEQAGGETPRYAAIVDGLRKAGFLIALGGFGAKHSNID
HHHHHHHHHHCCCCCCCEEEECCHHCCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCC
RVWHLHPDIVTLDRGILAQASEHSHLERVLPGLVSLLHESGQLVLMGGLATERDALIALE
EEEEECCCEEEECCCHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEE
CDVDFVQGQYFAGPSVDPVQPQAAAGCMDTLSAALRLRVAQRERTQAERLAPYVAALEEA
ECCEEECCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SKKLAAGEPLIDAAGAVLGLPETARCFLLDASGRQIGDNVLARGSVSQRAKRFRPLLHSE
HHHHHCCCCHHHHCCHHCCCCCCCEEEEEECCCCCCCCHHHHCCCHHHHHHHHHHHHHCC
GASWERRPYFSHAMRAPGRVHLTPPYLSINEAHLCVTASIAAPVATGMQVLCVDINWEAA
CCCCCCCCCHHHHHCCCCEEEECCCCCCCCCCEEEEEEHHHHHHHCCCEEEEEEECCCCC
LNRE
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA