| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is 115352629
Identifier: 115352629
GI number: 115352629
Start: 2840196
End: 2841785
Strand: Direct
Name: 115352629
Synonym: Bamb_2578
Alternate gene names: NA
Gene position: 2840196-2841785 (Clockwise)
Preceding gene: 115352628
Following gene: 115352631
Centisome position: 79.86
GC content: 74.15
Gene sequence:
>1590_bases ATGATGAGCAGAACGAAACAATTGTCCCGCACGGCGGGTCGGCGCTTTCACACCACCCTGCTGGCCGCAGCCGCGTTTGC TTGCTGCTGTTCGTACGCCAGTGCGCAGGACGCGACGCCCGGCGCCGCGCCCGACGCGATTGCGGGCGCGGACCCCGTGA TGATGCTGGTCGAGGATGCGGCGTCCTGCGCCGCCAATCCGGCTGCATGCGCGGTACACGTCTATGCCGGCCGCGGCGCG GCAGGCAGCGGTGCCGGCAATACCACGGGCGGTGGCAGTCCGGGTAATGGCGGAAGCGGCGGGAGCGGCGCGGTCGGGCC CGCAGGGGTCAGTGGTTCCACGGGATCAACATCCGGCGGTATGAATGGCACAGGCAGTGGCGGGACTGCGTCCGGCAACG GAGGTAAGGGTGATGGGTCTTCTGGTGGCGGCACTTCGGGTAACGGCGCTTCGGGTGGTGGTACTTCTGGTAGTGGCACT TCTGGCGGCGGCACTTCTGGTGGCGGTACTTCGGGTGGCGGTACTTCGGGCGGTGGCACTTCCGGCGGCGGCACTTCGGG TGGCGGTACTTCGGGTGGCGGTACTTCGGGTGGCGGTACTTCGGGTGGCGGCACTTCGGGTGGCGGCACTTCGGGTGGCG GCACTTCGGGTGGCGGTACCTCGGGCGGCGGTACCTCGGGTGGCGGTACCTCGGGTGGCGGTACCTCGGGTGGCGGTACC TCGGGTGGCGGTACCTCGGGTGGCGGTACTTCGGGTGGCGGTACCTCGGGTGGCGGCACTTCGGGTGGTCATGGTGGTCA CGGCGGTGGTGGTCATGGCGACGGTGGCGGCAATGGTGGTGGAAATGGCGTAGGTAACGGTGGCGGTCACGGCGGCGGTC ACGGCGGCGGCGGTGGCGGCGGTGGTCACGGCGGCGGCAATGGCGGCGGTCACGGTGGCGGCAACGGTGGCGGCAACGGC GGCGGCAGCGGTGGCGGCAGCGGCGGCGGTCACGGCGGCGGCAACGGTGGCGGCAACGGCGGCGGTCACGGCGGCGGCAA CGGTGGCGGCAACGGCGGCGGCAACGGTGGCGGCAACGGCGGCGGCAACGGTGGCGGCAACGGTGGCGGCAACGGTGGCG GCAACGGCGGCGGTCACGGCGGCGGCAGCGGCGGTCACGGCAACGGCAACGGCGGTCACGGCAACGGCAACGGCAACGGC AACGGTGGCGGTGGCGGTGGCGGTGGCGGTGGCGGCGGCGGCGGCGGTGGCGGTGGCGGTGGCGGTGGCGGTGGCGGTGG CGGCGGCGGCGGCGGCGGCGGCGGCGGTGGCGGTGGCGGTGGCGGTGGCGGCGGCAGCGGCGGCAGCGGCGGCGGCGGCG GCAGCGGCGGTAGCGGCGGCAGCGGCGGCGCCGGCGGCAGCGGTGGCCAAGGTAACGGCGGCGGCAGCACCGGCGGTCAC GGAATCGGTGGCCACGGCAATGGCGGTGGCAACGGTAATGGCAACGGCAATGGTGGCGCCGGCAGCGGCGGCGCCAACGG TGTCGGCAACGGCAGCGGCGGAGGCGGCGGAGGCGGCAGCGGTGGATCGGCCGGTGGCCATGGCCACTGA
Upstream 100 bases:
>100_bases CACGCATCGGCCGCCGATACGACATTGCATCGTTGCTGGTCCCCTGCATCACACGTTGACGGTCGCGCGTAACGAGGCAT CGCGCCCATCGGGGAGATCA
Downstream 100 bases:
>100_bases CCGACGCATCGCCTGAGCAGTGCCGTCAGAGCATTTCGAGCGCGCGCTTGCTGCGCGGCGGACGGAAATAACCGTCGATC TGCGCGCGCTCGTCATCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 529; Mature: 529
Protein sequence:
>529_residues MMSRTKQLSRTAGRRFHTTLLAAAAFACCCSYASAQDATPGAAPDAIAGADPVMMLVEDAASCAANPAACAVHVYAGRGA AGSGAGNTTGGGSPGNGGSGGSGAVGPAGVSGSTGSTSGGMNGTGSGGTASGNGGKGDGSSGGGTSGNGASGGGTSGSGT SGGGTSGGGTSGGGTSGGGTSGGGTSGGGTSGGGTSGGGTSGGGTSGGGTSGGGTSGGGTSGGGTSGGGTSGGGTSGGGT SGGGTSGGGTSGGGTSGGGTSGGHGGHGGGGHGDGGGNGGGNGVGNGGGHGGGHGGGGGGGGHGGGNGGGHGGGNGGGNG GGSGGGSGGGHGGGNGGGNGGGHGGGNGGGNGGGNGGGNGGGNGGGNGGGNGGGNGGGHGGGSGGHGNGNGGHGNGNGNG NGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGSGGSGGGGGSGGSGGSGGAGGSGGQGNGGGSTGGH GIGGHGNGGGNGNGNGNGGAGSGGANGVGNGSGGGGGGGSGGSAGGHGH
Sequences:
>Translated_529_residues MMSRTKQLSRTAGRRFHTTLLAAAAFACCCSYASAQDATPGAAPDAIAGADPVMMLVEDAASCAANPAACAVHVYAGRGA AGSGAGNTTGGGSPGNGGSGGSGAVGPAGVSGSTGSTSGGMNGTGSGGTASGNGGKGDGSSGGGTSGNGASGGGTSGSGT SGGGTSGGGTSGGGTSGGGTSGGGTSGGGTSGGGTSGGGTSGGGTSGGGTSGGGTSGGGTSGGGTSGGGTSGGGTSGGGT SGGGTSGGGTSGGGTSGGGTSGGHGGHGGGGHGDGGGNGGGNGVGNGGGHGGGHGGGGGGGGHGGGNGGGHGGGNGGGNG GGSGGGSGGGHGGGNGGGNGGGHGGGNGGGNGGGNGGGNGGGNGGGNGGGNGGGNGGGHGGGSGGHGNGNGGHGNGNGNG NGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGSGGSGGGGGSGGSGGSGGAGGSGGQGNGGGSTGGH GIGGHGNGGGNGNGNGNGGAGSGGANGVGNGSGGGGGGGSGGSAGGHGH >Mature_529_residues MMSRTKQLSRTAGRRFHTTLLAAAAFACCCSYASAQDATPGAAPDAIAGADPVMMLVEDAASCAANPAACAVHVYAGRGA AGSGAGNTTGGGSPGNGGSGGSGAVGPAGVSGSTGSTSGGMNGTGSGGTASGNGGKGDGSSGGGTSGNGASGGGTSGSGT SGGGTSGGGTSGGGTSGGGTSGGGTSGGGTSGGGTSGGGTSGGGTSGGGTSGGGTSGGGTSGGGTSGGGTSGGGTSGGGT SGGGTSGGGTSGGGTSGGGTSGGHGGHGGGGHGDGGGNGGGNGVGNGGGHGGGHGGGGGGGGHGGGNGGGHGGGNGGGNG GGSGGGSGGGHGGGNGGGNGGGHGGGNGGGNGGGNGGGNGGGNGGGNGGGNGGGNGGGHGGGSGGHGNGNGGHGNGNGNG NGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGSGGSGGGGGSGGSGGSGGAGGSGGQGNGGGSTGGH GIGGHGNGGGNGNGNGNGGAGSGGANGVGNGSGGGGGGGSGGSAGGHGH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40560; Mature: 40560
Theoretical pI: Translated: 7.77; Mature: 7.77
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSRTKQLSRTAGRRFHTTLLAAAAFACCCSYASAQDATPGAAPDAIAGADPVMMLVEDA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCHHHHHHHHH ASCAANPAACAVHVYAGRGAAGSGAGNTTGGGSPGNGGSGGSGAVGPAGVSGSTGSTSGG HHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MNGTGSGGTASGNGGKGDGSSGGGTSGNGASGGGTSGSGTSGGGTSGGGTSGGGTSGGGT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SGGGTSGGGTSGGGTSGGGTSGGGTSGGGTSGGGTSGGGTSGGGTSGGGTSGGGTSGGGT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SGGGTSGGGTSGGGTSGGGTSGGHGGHGGGGHGDGGGNGGGNGVGNGGGHGGGHGGGGGG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GGHGGGNGGGHGGGNGGGNGGGSGGGSGGGHGGGNGGGNGGGHGGGNGGGNGGGNGGGNG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GGNGGGNGGGNGGGNGGGHGGGSGGHGNGNGGHGNGNGNGNGGGGGGGGGGGGGGGGGGG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GGGGGGGGGGGGGGGGGGGGGGGGGSGGSGGGGGSGGSGGSGGAGGSGGQGNGGGSTGGH CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GIGGHGNGGGNGNGNGNGGAGSGGANGVGNGSGGGGGGGSGGSAGGHGH CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MMSRTKQLSRTAGRRFHTTLLAAAAFACCCSYASAQDATPGAAPDAIAGADPVMMLVEDA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCHHHHHHHHH ASCAANPAACAVHVYAGRGAAGSGAGNTTGGGSPGNGGSGGSGAVGPAGVSGSTGSTSGG HHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MNGTGSGGTASGNGGKGDGSSGGGTSGNGASGGGTSGSGTSGGGTSGGGTSGGGTSGGGT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SGGGTSGGGTSGGGTSGGGTSGGGTSGGGTSGGGTSGGGTSGGGTSGGGTSGGGTSGGGT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SGGGTSGGGTSGGGTSGGGTSGGHGGHGGGGHGDGGGNGGGNGVGNGGGHGGGHGGGGGG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GGHGGGNGGGHGGGNGGGNGGGSGGGSGGGHGGGNGGGNGGGHGGGNGGGNGGGNGGGNG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GGNGGGNGGGNGGGNGGGHGGGSGGHGNGNGGHGNGNGNGNGGGGGGGGGGGGGGGGGGG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GGGGGGGGGGGGGGGGGGGGGGGGGSGGSGGGGGSGGSGGSGGAGGSGGQGNGGGSTGGH CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GIGGHGNGGGNGNGNGNGGAGSGGANGVGNGSGGGGGGGSGGSAGGHGH CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA