| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is ypeA [C]
Identifier: 115352590
GI number: 115352590
Start: 2796647
End: 2797114
Strand: Direct
Name: ypeA [C]
Synonym: Bamb_2539
Alternate gene names: 115352590
Gene position: 2796647-2797114 (Clockwise)
Preceding gene: 229221143
Following gene: 115352599
Centisome position: 78.63
GC content: 69.44
Gene sequence:
>468_bases ATGGATGCCGCCGCCGATACTGTCGCCGATGCTATTGCCATCCGCCCGTTCGAACGCGCCGACACCGATGCCGTGCTGGC CGTCTGGCGCGACGCCTTCCCGCAGTACGACGAAGCCGGCGCGCCGCCGCACCGCGATCCGCTGCGATCGATCGAGCTGA AGCTCGCGACGCAGCCGGAGCTGTTCTTCGTCGCGACCTGCGGCGCGCGGGTGGTCGGCACGCTGATGGCGGGTTTCGAC GGACATCGCGGCTGGCTCTACTCGTTCGGTGTGTCGAACGACGCGCGGCGACTCGGCATCGGCCGCGCGCTGATCGCGCA TGCGGAACGCGCGCTCGCCGCGCGCGGCTGCCTGAAGATCAATCTGCAGGTGCTGCCCGGCAACGACGATGCGTGCCGCT TCTATGCGGCGCTCGGCTATCGCGTCGAGGAACGCATCTCGTTCGGCAAGACGCTGCCGGCCGCCTGA
Upstream 100 bases:
>100_bases CTGCGCTTCATGCCCGCGCTGACCGTGACGACCGAGGAAATCGACCAGATGATGGCGATGCTGCGGTCGATCCTCGACAC GCTCTAAGGAGACTGCCGCG
Downstream 100 bases:
>100_bases CGACGCCGGCAGCCGCCCGCCTCAGCGCGTGATCGGCCCCGCGTCCGGCAGCGGATTGCCGAGCGCGTCGGTCGGCACGG CCTGCTTCTCGAACGCCGCG
Product: putative acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MDAAADTVADAIAIRPFERADTDAVLAVWRDAFPQYDEAGAPPHRDPLRSIELKLATQPELFFVATCGARVVGTLMAGFD GHRGWLYSFGVSNDARRLGIGRALIAHAERALAARGCLKINLQVLPGNDDACRFYAALGYRVEERISFGKTLPAA
Sequences:
>Translated_155_residues MDAAADTVADAIAIRPFERADTDAVLAVWRDAFPQYDEAGAPPHRDPLRSIELKLATQPELFFVATCGARVVGTLMAGFD GHRGWLYSFGVSNDARRLGIGRALIAHAERALAARGCLKINLQVLPGNDDACRFYAALGYRVEERISFGKTLPAA >Mature_155_residues MDAAADTVADAIAIRPFERADTDAVLAVWRDAFPQYDEAGAPPHRDPLRSIELKLATQPELFFVATCGARVVGTLMAGFD GHRGWLYSFGVSNDARRLGIGRALIAHAERALAARGCLKINLQVLPGNDDACRFYAALGYRVEERISFGKTLPAA
Specific function: Unknown
COG id: COG0456
COG function: function code R; Acetyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI87082104, Length=141, Percent_Identity=38.2978723404255, Blast_Score=91, Evalue=3e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023072 - InterPro: IPR000182 - InterPro: IPR016181 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: 2.3.1.- [C]
Molecular weight: Translated: 16788; Mature: 16788
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAAADTVADAIAIRPFERADTDAVLAVWRDAFPQYDEAGAPPHRDPLRSIELKLATQPE CCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCC LFFVATCGARVVGTLMAGFDGHRGWLYSFGVSNDARRLGIGRALIAHAERALAARGCLKI EEEEEECHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCEEEE NLQVLPGNDDACRFYAALGYRVEERISFGKTLPAA EEEEECCCCCHHHHHHHHCCHHHHHHHCCCCCCCC >Mature Secondary Structure MDAAADTVADAIAIRPFERADTDAVLAVWRDAFPQYDEAGAPPHRDPLRSIELKLATQPE CCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCC LFFVATCGARVVGTLMAGFDGHRGWLYSFGVSNDARRLGIGRALIAHAERALAARGCLKI EEEEEECHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCEEEE NLQVLPGNDDACRFYAALGYRVEERISFGKTLPAA EEEEECCCCCHHHHHHHHCCHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA