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The map label for this gene is araC [C]

Identifier: 115352511

GI number: 115352511

Start: 2709383

End: 2710417

Strand: Direct

Name: araC [C]

Synonym: Bamb_2460

Alternate gene names: 115352511

Gene position: 2709383-2710417 (Clockwise)

Preceding gene: 115352509

Following gene: 115352512

Centisome position: 76.18

GC content: 70.72

Gene sequence:

>1035_bases
ATGGAGTTGAGACAGAAATCGGTATCCGTGCGGATCTACCGCTGGCTGTGCGAGGACGCGCGCACAAACGGCATCGATCC
CGCCGCGCTTTACGAGACGCTCGGCATCGGGCCGGCCGAGCTCGCCGACGACACGCGCCGCATCGCCGGCGACCGGCACG
TGGCCGCGATGCAGCTGACGAGCGGCTGGCCGCTGTCGTGGCATCGCCCGCCGCCGCAGGTCGTGCCGTGGCTCGTGCCG
TTTCCCGAGCTCGCGGGCGTCACGTGCAACGCGGCGACGCTGCGCGGCGCGCTGCACGGCTACCTGCGCTATCGCGAGCT
GATCGGCAACGTCGACTGGGTCTTCGCACACGAGAGAGGCGACGCGATCGCGCTCGAGTACGTGAACGAAGGAGAAGGCC
GGAACGCGGGCAGCGCGTTCGTCAATCTCGCGATCCTCGCGGCGCTTGCGGGCCTGTACGATCCGCACGTGCGCATCGAC
GACGCCGAATTCGCCGGCCGCGCGTTCGCGCCCGTTGCCGCGCTGCGCGACATGCTCGGCGCACCGGTGGCGTTCGAGGC
CGCGCACAACCGCATCGTGCTGCGCTCCGCGCACCTCGACACGCCGTTCGAGCGCTACAACGCGCCGCTCGCCGGCATCC
AGCGTCATGCGGCCGACGCCGCGCGCGAGCGCGTGCGCGCACGCTCGACGTTCGGCGCGTCGGTCGAACAATGCGTGCGC
GACTGGCTGCGTACCTCCGACGATACCGACGTGCCGACCGATACGCTGATGCAGCACGTGTGCACGCGCTTCGCGATGTC
GCGCTGGACGCTGCGCCGGCGGCTGCATCGCGAAGCGGTCGGTTTCCATGCGCTCGTCGCGCAGGCGCGGCTCGGCGAGG
CGCGCGACCTGCTGCTCAATACGCAGTTGCCGATCGGCGAGATCGGCGTGCGCGTCGGCTTCCGTTCGACGAGCGCATTC
ACGCGCTTCTTCACGCGCGAACTCGGCGCGGCGCCGAGCCGCTTTCGCGACGGGCACGGCGACCGGTGGCGTTGA

Upstream 100 bases:

>100_bases
AGTCTAAAAATCGACCGGTCACCACGCTTGACCGGCAGGAGCATGCGTTGACCTCTCGCAGCGGGGACAAACCCGAACGG
CATGACGACAGGGGGCAGAC

Downstream 100 bases:

>100_bases
CGCACGCTTTTTCTGAGACACTGGCGGCTTCGCATCCCGCCGCCCTCCCATGTCCTGGTTTCTGTATCTGATCGAATGCG
CGGACGACAGCGTCTACACG

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator AraC Family; Transcriptional Regulator AraC Family Protein

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MELRQKSVSVRIYRWLCEDARTNGIDPAALYETLGIGPAELADDTRRIAGDRHVAAMQLTSGWPLSWHRPPPQVVPWLVP
FPELAGVTCNAATLRGALHGYLRYRELIGNVDWVFAHERGDAIALEYVNEGEGRNAGSAFVNLAILAALAGLYDPHVRID
DAEFAGRAFAPVAALRDMLGAPVAFEAAHNRIVLRSAHLDTPFERYNAPLAGIQRHAADAARERVRARSTFGASVEQCVR
DWLRTSDDTDVPTDTLMQHVCTRFAMSRWTLRRRLHREAVGFHALVAQARLGEARDLLLNTQLPIGEIGVRVGFRSTSAF
TRFFTRELGAAPSRFRDGHGDRWR

Sequences:

>Translated_344_residues
MELRQKSVSVRIYRWLCEDARTNGIDPAALYETLGIGPAELADDTRRIAGDRHVAAMQLTSGWPLSWHRPPPQVVPWLVP
FPELAGVTCNAATLRGALHGYLRYRELIGNVDWVFAHERGDAIALEYVNEGEGRNAGSAFVNLAILAALAGLYDPHVRID
DAEFAGRAFAPVAALRDMLGAPVAFEAAHNRIVLRSAHLDTPFERYNAPLAGIQRHAADAARERVRARSTFGASVEQCVR
DWLRTSDDTDVPTDTLMQHVCTRFAMSRWTLRRRLHREAVGFHALVAQARLGEARDLLLNTQLPIGEIGVRVGFRSTSAF
TRFFTRELGAAPSRFRDGHGDRWR
>Mature_344_residues
MELRQKSVSVRIYRWLCEDARTNGIDPAALYETLGIGPAELADDTRRIAGDRHVAAMQLTSGWPLSWHRPPPQVVPWLVP
FPELAGVTCNAATLRGALHGYLRYRELIGNVDWVFAHERGDAIALEYVNEGEGRNAGSAFVNLAILAALAGLYDPHVRID
DAEFAGRAFAPVAALRDMLGAPVAFEAAHNRIVLRSAHLDTPFERYNAPLAGIQRHAADAARERVRARSTFGASVEQCVR
DWLRTSDDTDVPTDTLMQHVCTRFAMSRWTLRRRLHREAVGFHALVAQARLGEARDLLLNTQLPIGEIGVRVGFRSTSAF
TRFFTRELGAAPSRFRDGHGDRWR

Specific function: This Protein Controls The Expression Of At Least Six Genes That Are Involved In The Transport And Catabolism Of L-Arabinose. It Regulates Initiation Of Transcription Of The Arabad Operon And It Also Controls Its Own Synthesis. The L- Arabinose Operon Dis

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38336; Mature: 38336

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELRQKSVSVRIYRWLCEDARTNGIDPAALYETLGIGPAELADDTRRIAGDRHVAAMQLT
CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEEC
SGWPLSWHRPPPQVVPWLVPFPELAGVTCNAATLRGALHGYLRYRELIGNVDWVFAHERG
CCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCC
DAIALEYVNEGEGRNAGSAFVNLAILAALAGLYDPHVRIDDAEFAGRAFAPVAALRDMLG
CEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCHHHCCCHHHHHHHHHHHHC
APVAFEAAHNRIVLRSAHLDTPFERYNAPLAGIQRHAADAARERVRARSTFGASVEQCVR
CCEEEHHCCCEEEEEECCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
DWLRTSDDTDVPTDTLMQHVCTRFAMSRWTLRRRLHREAVGFHALVAQARLGEARDLLLN
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCC
TQLPIGEIGVRVGFRSTSAFTRFFTRELGAAPSRFRDGHGDRWR
CCCCHHHHHEEECCCCHHHHHHHHHHHHCCCCHHHCCCCCCCCC
>Mature Secondary Structure
MELRQKSVSVRIYRWLCEDARTNGIDPAALYETLGIGPAELADDTRRIAGDRHVAAMQLT
CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEEC
SGWPLSWHRPPPQVVPWLVPFPELAGVTCNAATLRGALHGYLRYRELIGNVDWVFAHERG
CCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCC
DAIALEYVNEGEGRNAGSAFVNLAILAALAGLYDPHVRIDDAEFAGRAFAPVAALRDMLG
CEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCHHHCCCHHHHHHHHHHHHC
APVAFEAAHNRIVLRSAHLDTPFERYNAPLAGIQRHAADAARERVRARSTFGASVEQCVR
CCEEEHHCCCEEEEEECCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
DWLRTSDDTDVPTDTLMQHVCTRFAMSRWTLRRRLHREAVGFHALVAQARLGEARDLLLN
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCC
TQLPIGEIGVRVGFRSTSAFTRFFTRELGAAPSRFRDGHGDRWR
CCCCHHHHHEEECCCCHHHHHHHHHHHHCCCCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA